DK957474
Clone id TST39A01NGRL0028_H12
Library
Length 611
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_H12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTACCTTGCCCCTCTACAGAAATTCGGCTTATTGCGGCTTCCATGGCTCTGGCTGAAGTG
GTGGCCGCGGCGCCTGACTCGGCTCACCGTGATCCGGTTCGGACTATGGGTGGTGGTTTC
AAAGGGGACCTACCTCAGGAACATGTTTCCGACGACAAGAATGGGGATGCTACTCAGTTT
AAAAGATTAGATGGAGCAGCTGAAGCGGCCAATGCTGGCTATAGTATACCTGTCTTGGCA
AGCTATGATGGAGGTGTGGGATGTGATACAAGACACGTATTCTCTGGCATGCTTGCTGAG
AATGGGCAGTCTATGTACTATGCCCCTGGTTATGAGTTTCCACAGCAATCTCCTTATTGC
TCACAGCCTCAAGGGGCTTACATGTCAAATATGGGATCTGGAACAACGGGGTACTGTGGA
CCGCAGTATGGGCCTTATTATCAGCAGGTGCCACCTGGGCTTATGCAGTATTACCCTGCA
GAGCAAGAAGTGACGAAGGCTGGAGCCAAGAAGCTGAATGTAAAGGATTGTACCCAAAAT
GCTAAGGCCAAACCTGGAGTGCCAGGAAAGCCAGGCTATCAGGCTGGACACAAAAGCATA
CTGCCTGATGC
■■Homology search results ■■ -
sp_hit_id Q9W4E2
Definition sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster
Align length 114
Score (bit) 33.9
E-value 0.67
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957474|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_H12, 5'
(611 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=... 34 0.67
sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287... 32 2.0
sp|Q28640|HRG_RABIT Histidine-rich glycoprotein (Fragment) OS=Or... 30 7.5
sp|P40411|FEUC_BACSU Iron-uptake system permease protein feuC OS... 30 7.5
sp|P21409|FBPB_SERMA Fe(3+)-transport system permease protein sf... 30 7.5
sp|P18292|THRB_RAT Prothrombin OS=Rattus norvegicus GN=F2 PE=1 SV=1 30 9.7
sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS OS=Fusobac... 30 9.7
sp|Q26614|FGFR_STRPU Fibroblast growth factor receptor OS=Strong... 30 9.7
sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo s... 30 9.7

>sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg
PE=1 SV=2
Length = 3584

Score = 33.9 bits (76), Expect = 0.67
Identities = 34/114 (29%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Frame = -2

Query: 424 AVHSTPLFQIPYLTCKPLEAVSNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHH 245
A HST T +P + S +A ++ Q H H QQ Q+ + PH H
Sbjct: 2071 ATHSTSSSASSTATSQPASSSSLSSLASQSQQQSHR--QLHKQQQQQQQQQQQQQPHYH- 2127

Query: 244 SLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEP-DHG 86
P Q +Y LI + HP KH E G +HP S P HG
Sbjct: 2128 --PHQPHYG---------LINGHQQHP-QLNGKHYAENGSTAGYHPHSHPHPHG 2169


>sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287191
OS=Dictyostelium discoideum GN=DDB_G0287191 PE=4 SV=1
Length = 72

Score = 32.3 bits (72), Expect = 2.0
Identities = 22/81 (27%), Positives = 28/81 (34%)
Frame = -2

Query: 277 RVLYHIPHLHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SE 98
R+ YH + HHS P ++ + H HS H +HH
Sbjct: 4 RLNYHHHNYHHSYPHHHHHHNY--------------HYHSYPHHH--------HHHSHHH 41

Query: 97 PDHGEPSQAPRPPLQPEPWKP 35
H PS P PP P P P
Sbjct: 42 HHHHLPSSPPSPPSPPSPPSP 62


>sp|Q28640|HRG_RABIT Histidine-rich glycoprotein (Fragment)
OS=Oryctolagus cuniculus GN=HRG PE=1 SV=1
Length = 526

Score = 30.4 bits (67), Expect = 7.5
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = -2

Query: 169 HPHSCRRKHVPEVGPL*NHHP*SEPDHGEPSQAP----RPPLQPEP 44
HPH P GP H P P HG P P PP P P
Sbjct: 344 HPHGPPPHGHPPHGPPPRHPPHGPPPHGHPPHGPPPHGHPPHGPPP 389



Score = 30.0 bits (66), Expect = 9.7
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = -2

Query: 145 HVPEVGPL*NHHP*SEPDHGEPSQAP---RPPLQPEP 44
H P P HHP P HG P P PP P P
Sbjct: 333 HHPHGPPPHGHHPHGPPPHGHPPHGPPPRHPPHGPPP 369



Score = 30.0 bits (66), Expect = 9.7
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Frame = -2

Query: 166 PHSCRRKHVPEVGPL*NHHP*SEPDHGEPSQAP----RPPLQPEP 44
PH +H P P H P P HG P P PP P P
Sbjct: 355 PHGPPPRHPPHGPPPHGHPPHGPPPHGHPPHGPPPHGHPPHGPPP 399


>sp|P40411|FEUC_BACSU Iron-uptake system permease protein feuC
OS=Bacillus subtilis GN=feuC PE=1 SV=2
Length = 394

Score = 30.4 bits (67), Expect = 7.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3

Query: 396 IWNNGVLWTAVWALLSAGATWAYAVLP 476
+W NG +W+A W ++A W +P
Sbjct: 182 VWKNGSIWSANWTYITAVLPWMLLFIP 208


>sp|P21409|FBPB_SERMA Fe(3+)-transport system permease protein sfuB
OS=Serratia marcescens GN=fbpB PE=3 SV=2
Length = 527

Score = 30.4 bits (67), Expect = 7.5
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3

Query: 342 TAISL---LLTASRGLHVK-YGIWNNGVLWTAVWALLSAGATWAYAVLPC 479
TA++L +T +R L + + +W N LW A+W LS A A + C
Sbjct: 295 TALALGVPFITLARWLWLGGFEVWRNAELWPALWQTLSLSAAGALLITLC 344


>sp|P18292|THRB_RAT Prothrombin OS=Rattus norvegicus GN=F2 PE=1 SV=1
Length = 617

Score = 30.0 bits (66), Expect = 9.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2

Query: 314 CTMPLVMSFHSNLLIAHSLKGLTCQIW 394
C M L +++H N+ + H+ G+ CQ+W
Sbjct: 109 CAMDLGLNYHGNVSVTHT--GIECQLW 133


>sp|Q8RFK2|MUTS_FUSNN DNA mismatch repair protein mutS
OS=Fusobacterium nucleatum subsp. nucleatum GN=mutS PE=3
SV=1
Length = 896

Score = 30.0 bits (66), Expect = 9.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3

Query: 357 IRRLLWKLITRGIVHRLPILSKHAREYVSCITSHTSIIACQDRYTIASIGRFS 199
++R + ++IT G + + L K+ Y++CI +T+ YT + G FS
Sbjct: 119 VKREVTRVITPGTIIDVDFLDKNNNNYIACIKINTTENIVAIAYTDITTGEFS 171


>sp|Q26614|FGFR_STRPU Fibroblast growth factor receptor
OS=Strongylocentrotus purpuratus GN=FGFR PE=2 SV=1
Length = 972

Score = 30.0 bits (66), Expect = 9.7
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Frame = +1

Query: 121 KGDLPQEHVSDDKNGDA---TQFKRLDGAAEAANAGYSIPVLASYDGGVGCDTRHVFSGM 291
K D PQ+ + +A T K L G + GY + + G GC+ + + G
Sbjct: 54 KPDAPQDLTAIPVKAEAIVLTWKKPLKGQTD----GYIVVYCLKRNKGNGCERQKIEGGN 109

Query: 292 LAENGQSMYYAPG-YEFPQQSPYCSQPQGA 378
+ E + YA Y+F QS Y P+GA
Sbjct: 110 VTEVEVTNLYANHTYQFQVQSWYSDHPKGA 139


>sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo
sapiens GN=C11orf35 PE=2 SV=1
Length = 634

Score = 30.0 bits (66), Expect = 9.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2

Query: 97 PDHGEPSQAPRPPLQPEPWKPQ 32
P HGEP +P+P P+ W P+
Sbjct: 333 PRHGEPVLSPQPCTDPDHWSPE 354


tr_hit_id B4N2C7
Definition tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni
Align length 113
Score (bit) 39.3
E-value 0.18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957474|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_H12, 5'
(611 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni GN=GK161... 39 0.18
tr|B2AUB8|B2AUB8_PODAN Predicted CDS Pa_1_18600 OS=Podospora ans... 38 0.40
tr|B4KYB6|B4KYB6_DROMO GI12500 OS=Drosophila mojavensis GN=GI125... 36 2.0
tr|B4N5E4|B4N5E4_DROWI GK20557 OS=Drosophila willistoni GN=GK205... 35 2.6
tr|A1CP48|A1CP48_ASPCL Putative uncharacterized protein OS=Asper... 35 2.6
tr|A9GRK7|A9GRK7_SORC5 Putative uncharacterized protein OS=Soran... 35 4.5
tr|A6G5F2|A6G5F2_9DELT Putative uncharacterized protein OS=Plesi... 35 4.5
tr|B7FSP6|B7FSP6_PHATR Predicted protein OS=Phaeodactylum tricor... 35 4.5
tr|B6LB31|B6LB31_BRAFL Putative uncharacterized protein OS=Branc... 34 5.8
tr|B3EQ74|B3EQ74_CHLPB PGAP1 family protein OS=Chlorobium phaeob... 34 7.6
tr|B7S0S4|B7S0S4_9GAMM Putative exonuclease, RdgC superfamily OS... 34 7.6
tr|A6N3K6|A6N3K6_9PLAN Polysulfide reductase subunit C (Fragment... 34 7.6
tr|Q0KHV9|Q0KHV9_DROME Rugose, isoform C OS=Drosophila melanogas... 34 7.6
tr|B7Z0X3|B7Z0X3_DROME Rugose, isoform D OS=Drosophila melanogas... 34 7.6
tr|B7Z0W8|B7Z0W8_DROME Rugose, isoform F OS=Drosophila melanogas... 34 7.6
tr|Q4SLL5|Q4SLL5_TETNG Chromosome 15 SCAF14556, whole genome sho... 33 10.0
tr|A7S4H3|A7S4H3_NEMVE Predicted protein OS=Nematostella vectens... 33 10.0

>tr|B4N2C7|B4N2C7_DROWI GK16142 OS=Drosophila willistoni GN=GK16142
PE=4 SV=1
Length = 809

Score = 39.3 bits (90), Expect = 0.18
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 7/113 (6%)
Frame = -2

Query: 361 SNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHHS-----LPRQVYYSQHWPLQL 197
+N + V+ H Q H+T H A +H+ H HH+ P ++ H +
Sbjct: 170 TNSAVNVKPHTQFHNTLAHHMTVAHHAAAAAHHV-HAHHAPHPHPHPHHSHHHHHHHAAM 228

Query: 196 LHLIF*T--E*HPHSCRRKHVPEVGPL*NHHP*SEPDHGEPSQAPRPPLQPEP 44
H + HPH+ HVP VG + + P P P P L P+P
Sbjct: 229 AHHLLANGFHPHPHALALAHVPVVGGQQSTAAVAPP---APPTLPPPTLMPQP 278


>tr|B2AUB8|B2AUB8_PODAN Predicted CDS Pa_1_18600 OS=Podospora
anserina PE=4 SV=1
Length = 597

Score = 38.1 bits (87), Expect = 0.40
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -2

Query: 262 IPHLHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SEPDHGE 83
+PHLH S P + H L HL + PH+ R H + +HHP +P HG+
Sbjct: 54 LPHLHPSYP----HYHHGVNSLYHLSRQNQ-GPHAPRPSHSRNLSLQPHHHP-QQPSHGQ 107

Query: 82 PSQAPRPPLQPEPWKPQ 32
Q + P QP+ + Q
Sbjct: 108 LQQQQQQPQQPQQQQQQ 124


>tr|B4KYB6|B4KYB6_DROMO GI12500 OS=Drosophila mojavensis GN=GI12500
PE=4 SV=1
Length = 788

Score = 35.8 bits (81), Expect = 2.0
Identities = 33/120 (27%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Frame = -2

Query: 505 LQPSSLLALQGNTA*AQVAPADNKAHT------------AVHSTPL--FQIPYLTCKPLE 368
+ P + L L G+ A DN A T A+ T L F P L+ P+E
Sbjct: 251 IDPENALMLSGS---AVANGGDNAAATQQQQLLPQVKMEAIDETLLETFSTPMLS--PME 305

Query: 367 AVSNKEIAVETHNQGHST*TAHSQQACQRIRVLYHIPHLHHSLPRQVYYSQHWPLQLLHL 188
+ K+ + H H QQ Q + YH H Q +Y QH+ Q HL
Sbjct: 306 IKTEKQQRQQQQQHQHQQQQQHQQQQQQHQQQQYHQQQQHQQQQHQQHYQQHYQQQQQHL 365


>tr|B4N5E4|B4N5E4_DROWI GK20557 OS=Drosophila willistoni GN=GK20557
PE=4 SV=1
Length = 880

Score = 35.4 bits (80), Expect = 2.6
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = -2

Query: 259 PHLHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHV-PEVGPL*NHHP*SEPDHGE 83
PHLH P Y QH P H HPH+ H P P + HP + P H
Sbjct: 742 PHLHQGHPHFAYQPQHHPHFYPHQ------HPHAHAHAHAHPHPHPHPHPHPHAHPPHPS 795

Query: 82 PSQAPRPPLQPEP 44
+ P Q P
Sbjct: 796 HPHQQQHPHQQHP 808


>tr|A1CP48|A1CP48_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_021280 PE=4 SV=1
Length = 122

Score = 35.4 bits (80), Expect = 2.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1

Query: 304 GQSMYYAPGYEFPQQSPYCSQPQ-GAYMSNMGSGTT 408
GQ MYY P +PQQ PY Q Q G Y G G++
Sbjct: 65 GQPMYYPPPQGYPQQQPYPPQQQPGYYADERGGGSS 100


>tr|A9GRK7|A9GRK7_SORC5 Putative uncharacterized protein
OS=Sorangium cellulosum (strain So ce56) GN=sce3477 PE=4
SV=1
Length = 486

Score = 34.7 bits (78), Expect = 4.5
Identities = 26/88 (29%), Positives = 31/88 (35%)
Frame = +1

Query: 139 EHVSDDKNGDATQFKRLDGAAEAANAGYSIPVLASYDGGVGCDTRHVFSGMLAENGQSMY 318
EHV D G GA A G +P GGVG F G +G Y
Sbjct: 66 EHVVDVPAGGGADVPNSGGADVPAGGGADVP----NGGGVGDRCAGPFPGEEPRDGSGYY 121

Query: 319 YAPGYEFPQQSPYCSQPQGAYMSNMGSG 402
PG +P +S G YM + G
Sbjct: 122 LKPGLLYPAES------SGVYMGQLSLG 143


>tr|A6G5F2|A6G5F2_9DELT Putative uncharacterized protein
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_03463 PE=4 SV=1
Length = 480

Score = 34.7 bits (78), Expect = 4.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2

Query: 88 GEPSQAPRPPLQPEPWKP 35
G+P+ AP PP +PEPW+P
Sbjct: 154 GDPADAPEPPPEPEPWEP 171


>tr|B7FSP6|B7FSP6_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_43574 PE=4 SV=1
Length = 499

Score = 34.7 bits (78), Expect = 4.5
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2

Query: 233 SWQAMMEVWDVIQDTYSLACLLRM-GSLCTMPLVMSFHSNLLIAHSLKGLTCQIWDLEQR 409
SW ++VWD+ + CLL + GS L S+HS+ ++A T ++WD+
Sbjct: 347 SWDHSLKVWDMERQD----CLLTLNGSRVVSCLDTSYHSSGIVATGHPDCTVRLWDVRID 402

Query: 410 GTVDRSMGL 436
T + S+ L
Sbjct: 403 ATNESSLAL 411


>tr|B6LB31|B6LB31_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_118753 PE=4 SV=1
Length = 1311

Score = 34.3 bits (77), Expect = 5.8
Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 15/88 (17%)
Frame = -2

Query: 268 YHIPHLHHSLPRQVYYSQHWPLQLLHLIF*TE*HPHSCRRKHVPEVGPL*NHHP*SE--- 98
+H+P HH P+ QH L H PH ++ +GP +H P +
Sbjct: 973 HHVPPQHHGPPQHHGPPQHHGLPQHH-------GPHYGPQEQPKHLGPSQHHGPHARVMQ 1025

Query: 97 -PDHG-----------EPSQAPRPPLQP 50
PDHG +P Q P PP P
Sbjct: 1026 GPDHGPQQHGHHEWHVDPHQPPHPPFPP 1053


>tr|B3EQ74|B3EQ74_CHLPB PGAP1 family protein OS=Chlorobium
phaeobacteroides (strain BS1) GN=Cphamn1_2478 PE=4 SV=1
Length = 465

Score = 33.9 bits (76), Expect = 7.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2

Query: 245 MMEVWDVIQDTYSLACLLRMGSLCTMPLVMSFHSNLLIAHSLKGLTCQ 388
++ +W+ D LAC L + CT P + + S L+AHS+ GL Q
Sbjct: 66 LVGLWEACPDISKLACFLH--TCCTNPPLDRYKSLALVAHSMGGLVVQ 111