DK957280
Clone id TST39A01NGRL0027_P07
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_P07. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CAAAAAATTGCCTCAAGTGTCTGCTTCCGGGTGTACTTAGATCTAGCCTTGAAGGCATGG
TTGACTATGTGCTGAAGCGGCTATACTAACAAGGCGTTTATAGTGGACGTTGGCAACAGT
GTATCATGAGATACCTTGTAGTGTATATGTGACACGTGACACCAGCTTTCTTTTCAGGAA
GTACGACACCTGCAAAGCAGGACAAATGTAAGGAAGGCTTTGCACTGTCAGCACAACGAA
TATAGGGAAGGCTTTGCATTGTCAGAAAAGGCCTGTGCTGGGTTTCTTGTGTGATGGTTG
GATATGCCACCCATGGGCTTTCAACACAGGGGATGCTGCCAAGGATAAAGTTTTGTTTAC
AGGATGTAGACTAATCAGCTCTCTTTATTCTTGGCAACTGTGCTTCTCCCCTTGTTTGTC
TGTGTATACAATGTCATTTATTGTATTAATTTTGCAAATAAATCTCTTTCCCTTNCGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5UPB0
Definition sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeba polyphaga mimivirus
Align length 33
Score (bit) 29.6
E-value 7.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957280|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_P07, 5'
(477 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeb... 30 7.4

>sp|Q5UPB0|YR034_MIMIV Uncharacterized protein R34 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R34 PE=3 SV=1
Length = 409

Score = 29.6 bits (65), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1

Query: 172 FQEVRHLQSRTNVRKALHCQHNEYREGFALSEK 270
FQE+ Q V+K L +HN+ + GF L++K
Sbjct: 239 FQELLESQENVKVKKDLITKHNKLKLGFTLNDK 271


tr_hit_id A9TB35
Definition tr|A9TB35|A9TB35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 28
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957280|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_P07, 5'
(477 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TB35|A9TB35_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.4
tr|A9S7J9|A9S7J9_PHYPA Predicted protein OS=Physcomitrella paten... 35 1.4
tr|A6QVT8|A6QVT8_AJECN Putative uncharacterized protein OS=Ajell... 35 2.4
tr|A1CIC2|A1CIC2_ASPCL Iron-sulfur cluster assembly associated p... 34 4.2
tr|B2VY25|B2VY25_PYRTR Predicted protein OS=Pyrenophora tritici-... 33 9.2

>tr|A9TB35|A9TB35_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_142892 PE=3 SV=1
Length = 344

Score = 35.4 bits (80), Expect = 1.4
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3

Query: 3 KNCLKCLLPGVLRSSLEGMVDYVLKRLY 86
K L+CL G R SLE MVDYVL+R+Y
Sbjct: 317 KKSLECLPQGDTRRSLERMVDYVLERIY 344


>tr|A9S7J9|A9S7J9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_125303 PE=3 SV=1
Length = 356

Score = 35.4 bits (80), Expect = 1.4
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3

Query: 3 KNCLKCLLPGVLRSSLEGMVDYVLKRLY 86
K L+CL G R SLE MVDYVL+R+Y
Sbjct: 329 KKSLECLPQGDTRRSLEKMVDYVLERIY 356


>tr|A6QVT8|A6QVT8_AJECN Putative uncharacterized protein
OS=Ajellomyces capsulata (strain NAm1 / WU24)
GN=HCAG_01495 PE=4 SV=1
Length = 630

Score = 34.7 bits (78), Expect = 2.4
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 14/64 (21%)
Frame = +2

Query: 266 KRPVLGFLCDGWIC-----HPWAFNTGDAAKDKVLFTGCRL---------ISSLYSWQLC 403
KRPVL C GWIC HP K TG L ISS W L
Sbjct: 219 KRPVLSSACPGWICYAEKTHPHVLPHISRLKSPQALTGTLLKTVLSKALNISSAQIWHLA 278

Query: 404 FSPC 415
PC
Sbjct: 279 IMPC 282


>tr|A1CIC2|A1CIC2_ASPCL Iron-sulfur cluster assembly associated
protein Nar1, putative OS=Aspergillus clavatus
GN=ACLA_050990 PE=4 SV=1
Length = 597

Score = 33.9 bits (76), Expect = 4.2
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 14/76 (18%)
Frame = +2

Query: 230 STTNIGKALHCQKRPVLGFLCDGWIC-----HPWAFNTGDAAKDKVLFTGCRL------- 373
S T+I KRP+L C GWIC HP+ K TG L
Sbjct: 189 SLTSIDPLNTLPKRPILSSACPGWICYAEKTHPFILPHLSRLKSPQALTGTLLKSVLSKA 248

Query: 374 --ISSLYSWQLCFSPC 415
IS W L PC
Sbjct: 249 LGISPTRIWHLAIMPC 264


>tr|B2VY25|B2VY25_PYRTR Predicted protein OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=PTRG_02315 PE=4
SV=1
Length = 582

Score = 32.7 bits (73), Expect = 9.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1

Query: 384 RELISLHPVNKTLSLAASPVLKAHGWHIQPSHKKPSTG 271
R L+ PV L + PV++ GWHI P+ + P G
Sbjct: 373 RLLLENEPVKSQLHVFEEPVMQGCGWHISPTSRIPQWG 410