DK957269
Clone id TST39A01NGRL0027_O20
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_O20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
TGTCTCCATGTTGTTTGTCGAGTTTAACCAACATGCACAATGCCTCGTTGTTTTACCATG
CCATCGTGAGTCTTGCAAAACCCCCTAAACCCTGGTAACGCCCACAGAGCCATCGCCTGC
AAAATGATGTCTGTTTGCCGCGCTCTGCGGCAAAGGAACGGGAGTTTCCCCCCCTCAATT
GCAACTTTGCTAAATGCGCACACCACAGAGTCCGAGTCCGCCTCTCGCAGCAGCTACCCA
AGGATTGATGCATCCTTTCACACATCCTATGGTTTTCGAGCTGAGATACGACATCACCTC
ACGTGGTCACACTTGCGCGGATGTGGGCACAACCCTTGTGCTTCAGGTTTGCGGGCTATG
CATTGGATCGCCTCCACCAACTATCATCAATTGGGTTACAATAGAGACAATGGAACGAGT
TTCAAGGACTGCAAACTGTTAGCAGCTAGAGGAGAGCGCCCTAGATTCTTTACTAGTGGA
TTGGTAACTATGACATTGATAGCAGCTAACGTGGCAGTGTCCACGATGTGGTGGAAAATG
AATCCTCGGTTCATGGACACACATTTTATGGTATCTTATGAGAGTTTCATCCATGGCCGT
TTACACACTCTC
■■Homology search results ■■ -
sp_hit_id Q54QP6
Definition sp|Q54QP6|OSB8_DICDI Oxysterol-binding protein 8 OS=Dictyostelium discoideum
Align length 53
Score (bit) 32.7
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957269|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_O20, 5'
(612 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54QP6|OSB8_DICDI Oxysterol-binding protein 8 OS=Dictyosteliu... 33 1.5
sp|P24414|NS3B_CVPRM Non-structural protein 3b OS=Porcine respir... 32 3.4
sp|P22656|NS3B_CVPFS Non-structural protein 3b OS=Porcine transm... 32 3.4
sp|Q9T1R6|VP32_BPAPS Putative DNA transfer protein p32 OS=Acyrth... 31 4.4
sp|Q7T6T1|NS3B_CVCBG Non-structural protein 3b OS=Canine coronav... 31 4.4
sp|O75011|NAK1_SCHPO Serine/threonine-protein kinase nak1 OS=Sch... 31 4.4
sp|Q5D1C1|MATK_ASTSI Maturase K OS=Astragalus sinicus GN=matK PE... 31 4.4
sp|P02789|TRFE_CHICK Ovotransferrin OS=Gallus gallus PE=1 SV=2 30 7.5
sp|P09047|NS3B_CVPPU Putative non-structural protein 3b OS=Porci... 30 9.8
sp|Q8MCP4|MATK_MELID Maturase K OS=Melilotus indica GN=matK PE=3... 30 9.8
sp|P46821|MAP1B_HUMAN Microtubule-associated protein 1B OS=Homo ... 30 9.8

>sp|Q54QP6|OSB8_DICDI Oxysterol-binding protein 8 OS=Dictyostelium
discoideum GN=osbH PE=1 SV=1
Length = 402

Score = 32.7 bits (73), Expect = 1.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1

Query: 208 ESESASRSSYPRIDASFHTSYGFRAEIRHHLTWSHLRGCGHNPCASGLRAMHW 366
+S+ SS ID T++ F + HH TW+HL C HN L H+
Sbjct: 164 KSKFYGNSSEVEIDG---TNHFFNKKTNHHYTWNHLVTCCHNIIIGSLWLDHY 213


>sp|P24414|NS3B_CVPRM Non-structural protein 3b OS=Porcine
respiratory coronavirus (strain RM4) GN=3b PE=3 SV=1
Length = 244

Score = 31.6 bits (70), Expect = 3.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1

Query: 466 FFTSGLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGR 600
++ G+VT T+++ A +W +N RF + + F+HGR
Sbjct: 98 YYIDGIVTTTVLSLRFAYLAYFWYVNSRFEFILYNTTTLMFVHGR 142


>sp|P22656|NS3B_CVPFS Non-structural protein 3b OS=Porcine
transmissible gastroenteritis coronavirus (strain
FS772/70) GN=3b PE=3 SV=1
Length = 244

Score = 31.6 bits (70), Expect = 3.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1

Query: 466 FFTSGLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGR 600
++ G+VT T+++ A +W +N RF + + F+HGR
Sbjct: 98 YYIDGIVTTTVLSLRFAYLAYFWYVNSRFEFILYNTTTLMFVHGR 142


>sp|Q9T1R6|VP32_BPAPS Putative DNA transfer protein p32
OS=Acyrthosiphon pisum secondary endosymbiont phage 1
GN=32 PE=3 SV=1
Length = 209

Score = 31.2 bits (69), Expect = 4.4
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1

Query: 285 LSSKTIGCVKGCIN-PWVAAARGGLGLCG 202
L+ +IG +KG I PW AA GGLGL G
Sbjct: 178 LTGASIGAMKGSIGGPWGAAIGGGLGLLG 206


>sp|Q7T6T1|NS3B_CVCBG Non-structural protein 3b OS=Canine
coronavirus (strain BGF10) GN=3b PE=3 SV=1
Length = 250

Score = 31.2 bits (69), Expect = 4.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1

Query: 466 FFTSGLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGR 600
++ G+VT T++A + +W +N RF + + F+HGR
Sbjct: 97 YYIDGIVTTTVLALRFIYLSYFWYVNNRFEFVLYNTTTLMFVHGR 141


>sp|O75011|NAK1_SCHPO Serine/threonine-protein kinase nak1
OS=Schizosaccharomyces pombe GN=nak1 PE=1 SV=1
Length = 652

Score = 31.2 bits (69), Expect = 4.4
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = +1

Query: 73 LQNPLN-PGNAHRAIACKMMSVCRALRQRNGSFPP--SIATLLNAHTTESESASRSSYPR 243
L PL P + H A+ + + V R++ S PP SI+ + H ESAS S P+
Sbjct: 508 LSTPLEAPAHKHSAVL-QPLEVNRSI-----SIPPPKSISPSI-LHKPSLESAS--STPK 558

Query: 244 IDASFHTSYGFRAEIRHHLTWSHLRGCGHNPCASGLRAMHWIASTNYHQLGYNRDNGTSF 423
I + T F +++R HL P + G A+ +A+ NY LG N F
Sbjct: 559 ISSCSSTPKPFNSKLRAHLP----------PLSIGSPAVQPLANDNYDSLGVRGLNMELF 608

Query: 424 KD 429
D
Sbjct: 609 ND 610


>sp|Q5D1C1|MATK_ASTSI Maturase K OS=Astragalus sinicus GN=matK PE=3
SV=1
Length = 508

Score = 31.2 bits (69), Expect = 4.4
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +1

Query: 106 RAIACKMMSVCRALRQRNGSFPPSIATLLNAHTTESESASRSSYPRIDASFHTSYGFR 279
+ +ACK S RA +R+GS LL TE E +PR A+ H G R
Sbjct: 440 KTLACKHKSTVRAFLKRSGS-----EELLEEFFTEEEEILSLIFPRASATLHKFNGNR 492


>sp|P02789|TRFE_CHICK Ovotransferrin OS=Gallus gallus PE=1 SV=2
Length = 705

Score = 30.4 bits (67), Expect = 7.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2

Query: 329 TTLVLQVCGLCIGSPPPTIINWVTIETME 415
T L L + +C +PP ++I W TI + E
Sbjct: 7 TVLSLGIAAVCFAAPPKSVIRWCTISSPE 35


>sp|P09047|NS3B_CVPPU Putative non-structural protein 3b OS=Porcine
transmissible gastroenteritis coronavirus (strain
Purdue) GN=3b PE=5 SV=2
Length = 244

Score = 30.0 bits (66), Expect = 9.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1

Query: 466 FFTSGLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGR 600
++ G+VT T+++ +W +N RF + + F+HGR
Sbjct: 98 YYIDGIVTTTVLSLRFVYLAYFWYVNSRFEFILYNTTTLMFVHGR 142


>sp|Q8MCP4|MATK_MELID Maturase K OS=Melilotus indica GN=matK PE=3
SV=1
Length = 506

Score = 30.0 bits (66), Expect = 9.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1

Query: 106 RAIACKMMSVCRALRQRNGSFPPSIATLLNAHTTESESASRSSYPRIDASFH 261
+ +ACK S RA +R+GS LL A TE E +PR ++ H
Sbjct: 438 KTLACKHKSTVRAFLKRSGS-----EELLEAFFTEEEEILSLIFPRDSSTLH 484


tr_hit_id B6TZE0
Definition tr|B6TZE0|B6TZE0_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 123
Score (bit) 49.7
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957269|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_O20, 5'
(612 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6TZE0|B6TZE0_MAIZE Putative uncharacterized protein OS=Zea m... 50 1e-04
tr|Q5JMG2|Q5JMG2_ORYSJ Rhomboid family protein-like (Os01g076310... 47 0.001
tr|B8A9U6|B8A9U6_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.002
tr|A7QHZ3|A7QHZ3_VITVI Chromosome chr17 scaffold_101, whole geno... 44 0.006
tr|Q9FZ81|Q9FZ81_ARATH F25I16.6 protein (Putative uncharacterize... 44 0.007
tr|A9RJ33|A9RJ33_PHYPA Predicted protein (Fragment) OS=Physcomit... 38 0.41
tr|B4FS22|B4FS22_MAIZE Putative uncharacterized protein OS=Zea m... 37 1.2
tr|A9V3A3|A9V3A3_MONBE Predicted protein OS=Monosiga brevicollis... 36 1.6
tr|Q84WG3|Q84WG3_ARATH Putative uncharacterized protein At1g7413... 36 2.0
tr|Q3ECD4|Q3ECD4_ARATH Uncharacterized protein At1g74130.2 OS=Ar... 36 2.0
tr|Q01CN6|Q01CN6_OSTTA Integral membrane protease of the rhomboi... 35 2.7
tr|Q1DNS3|Q1DNS3_COCIM Predicted protein OS=Coccidioides immitis... 35 3.4
tr|A2CE77|A2CE77_DANRE Novel protein similar to vertebrate RAS p... 35 4.5
tr|Q4QAT8|Q4QAT8_LEIMA Putative uncharacterized protein OS=Leish... 34 5.8
tr|Q7M146|Q7M146_9GAMM NifB protein OS=Azotobacter chroococcum P... 34 5.9
tr|Q9C6A2|Q9C6A2_ARATH Putative uncharacterized protein F9E11.2 ... 34 5.9

>tr|B6TZE0|B6TZE0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 328

Score = 49.7 bits (117), Expect = 1e-04
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Frame = +1

Query: 295 HLTWSHLRGC-GHNP---------CASGLRAMHWIASTN-------YHQLGYNRDNGTSF 423
HL W+ L G G +P A+ A W+A+ + + R +G F
Sbjct: 53 HLIWNRLSGSTGISPLPRTAADVAAAARTAASRWLATARGARSLDLFSLPRWRRASGRQF 112

Query: 424 KDCKLLAARGERPRFFTSGLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRL 603
L ++ LI ANVAV +W +P FM HFM+S ++F GRL
Sbjct: 113 SPSPFLQGATWASWMESADGAVWMLIGANVAVFLLWRVADPGFMRKHFMISLDNFKSGRL 172

Query: 604 HTL 612
HTL
Sbjct: 173 HTL 175


>tr|Q5JMG2|Q5JMG2_ORYSJ Rhomboid family protein-like (Os01g0763100
protein) OS=Oryza sativa subsp. japonica GN=P0512C01.43
PE=4 SV=1
Length = 308

Score = 46.6 bits (109), Expect = 0.001
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +1

Query: 433 KLLAARGERPRFFTS--GLVTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLH 606
+L + + R ++ S G V M L+ ANV V +W +P FM HFM+S ++F GRLH
Sbjct: 94 ELFSLQRRRTKWLPSADGAVLM-LVGANVGVFMLWHLADPSFMRRHFMISLDNFKSGRLH 152

Query: 607 TL 612
TL
Sbjct: 153 TL 154


>tr|B8A9U6|B8A9U6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03840 PE=4 SV=1
Length = 327

Score = 46.2 bits (108), Expect = 0.002
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1

Query: 490 MTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLHTL 612
+ L+ ANV V +W +P FM HFM+S ++F GRLHTL
Sbjct: 130 LMLVGANVGVFMLWHLADPSFMRRHFMISLDNFKSGRLHTL 170


>tr|A7QHZ3|A7QHZ3_VITVI Chromosome chr17 scaffold_101, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00000029001
PE=4 SV=1
Length = 333

Score = 44.3 bits (103), Expect = 0.006
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Frame = +1

Query: 451 GERPRFFTSGL----VTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLHTL 612
G R R + SGL V + LI ANVAV +W + RFM +F +S ++F GR+HTL
Sbjct: 121 GRRWRSWLSGLSTNDVVLGLIIANVAVFMLWRISDHRFMLNNFTISLDNFKSGRIHTL 178


>tr|Q9FZ81|Q9FZ81_ARATH F25I16.6 protein (Putative uncharacterized
protein) (Putative uncharacterized protein At1g18600)
(Putative uncharacterized protein F25I16.6)
OS=Arabidopsis thaliana GN=At1g18600 PE=2 SV=1
Length = 336

Score = 43.9 bits (102), Expect = 0.007
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1

Query: 484 VTMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLHTL 612
V + L+ AN V MW N +FM +FM+S ++F GRLHTL
Sbjct: 135 VVLGLVIANAGVFVMWRVFNQQFMMNNFMISLDNFKSGRLHTL 177


>tr|A9RJ33|A9RJ33_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_53495 PE=4 SV=1
Length = 167

Score = 38.1 bits (87), Expect = 0.41
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +1

Query: 496 LIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLHTL 612
L+ N+AV +W + +FM +FMVS S + GR+HT+
Sbjct: 1 LVGVNLAVFGLWQFADRKFMTNNFMVSVNSVLSGRIHTI 39


>tr|B4FS22|B4FS22_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 127

Score = 36.6 bits (83), Expect = 1.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1

Query: 597 AMDETLIRYHKMCVHEPRIHFPPHRG-HCHVSCYQCHSYQSTSKESRALSSS 445
A D +++HKMC P+ H PPHR H C +C + + ++ A S S
Sbjct: 19 AADFAFLKHHKMCALPPQPHLPPHRARHDREVCARCPTPSAPIHKTLATSIS 70


>tr|A9V3A3|A9V3A3_MONBE Predicted protein OS=Monosiga brevicollis
GN=33060 PE=4 SV=1
Length = 310

Score = 36.2 bits (82), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1

Query: 487 TMTLIAANVAVSTMWWKMNPRFMDTHFMVSYESFIHGRLHTL 612
T TLI N AV ++W P +M HF S +++ GR +TL
Sbjct: 68 TYTLIGINTAVFSLWHLQPPHWMIQHFATSEQNWSEGRWYTL 109


>tr|Q84WG3|Q84WG3_ARATH Putative uncharacterized protein At1g74130
OS=Arabidopsis thaliana GN=At1g74130 PE=2 SV=1
Length = 322

Score = 35.8 bits (81), Expect = 2.0
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1

Query: 484 VTMTLIAANVAVSTMWWKMNP--RFMDTHFMVSYESFIHGRLHTL 612
V L+ AN AV TMW + +M +FM+S SF+ GR+HTL
Sbjct: 117 VVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTL 161


>tr|Q3ECD4|Q3ECD4_ARATH Uncharacterized protein At1g74130.2
OS=Arabidopsis thaliana GN=At1g74130 PE=4 SV=1
Length = 296

Score = 35.8 bits (81), Expect = 2.0
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1

Query: 484 VTMTLIAANVAVSTMWWKMNP--RFMDTHFMVSYESFIHGRLHTL 612
V L+ AN AV TMW + +M +FM+S SF+ GR+HTL
Sbjct: 117 VVFGLVIANAAVFTMWRVLGKDNMWMVKNFMLSRYSFMTGRIHTL 161