| DK957161 |
| Clone id |
TST39A01NGRL0027_K06 |
| Library |
TST39 |
| Length |
625 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_K06. 5' end sequence. |
| Accession |
DK957161 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
GTCTGCAGACAGTACATTACCATCAGCAAAGGTTGCCGTGCCGCCAGCTAGCTCAACAAC
ACATGGAAACCCTTCTCAAACAACTGTTGGAACTAAAAATGGTGCAGAAGAAAAAGATGA
TGTCTTCTCCGATACTGAGAGTGAAGGCAGTGTCCGCAAGCGGGCAGAGGGCATTGAGCA
GATCCCAACGAGGCCTACAGCTGAAGGAGTTGGTCTGCAACCAACTGGGAATGATCAACC
CAATTTAGCAACAGATGCAGCTGTTAGTGGAAAAGTCATACAGAACAGTGCCAATGATGC
TTATCCAAGCAATGCTATTGGCAAGAATACGCAGGATAAAGAGGAGGGCTCTGTCCAAAA
TTCAAGAAATGTGGCGCATGAACCAGCACCTGCACATAGTGTAAGTGAGACGACAAATGC
TCATCTTCCACCCAGCGATTTCAAGGCAATAGCTGCAGCAAGTGCAGCAGATGCCTCTGT
GTTTACATTTGGTGATGAGGAGGATTTTGAAAGCGAAGATGATTGAGTCGAGCACTGCTG
GTGGTGGCCCTAACAAACGGTGCTTCAATGGTAACTGCATATACCTTATTCCTGAAGTAC
AAAATCCTCTTTCAGTATGAAACTC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q7A362 |
| Definition |
sp|Q7A362|SRAP_STAAN Serine-rich adhesin for platelets OS=Staphylococcus aureus (strain N315) |
| Align length |
160 |
| Score (bit) |
36.6 |
| E-value |
0.11 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957161|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_K06, 5'
(625 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7A362|SRAP_STAAN Serine-rich adhesin for platelets OS=Staphy... 37 0.11
sp|Q99QY4|SRAP_STAAM Serine-rich adhesin for platelets OS=Staphy... 37 0.11
sp|Q1LUQ4|MFSD6_DANRE Major facilitator superfamily domain-conta... 37 0.11
sp|P10354|CMGA_RAT Chromogranin-A OS=Rattus norvegicus GN=Chga P... 37 0.11
sp|Q4L9P0|SRAP_STAHJ Serine-rich adhesin for platelets OS=Staphy... 36 0.18
sp|Q5HCP3|SRAP_STAAC Serine-rich adhesin for platelets OS=Staphy... 35 0.24
sp|Q2FUW1|SRAP_STAA8 Serine-rich adhesin for platelets OS=Staphy... 35 0.24
sp|Q2FDK5|SRAP_STAA3 Serine-rich adhesin for platelets OS=Staphy... 35 0.24
sp|Q4WGB7|MSH3_ASPFU DNA mismatch repair protein msh3 OS=Aspergi... 35 0.24
sp|B0YCF6|MSH3_ASPFC DNA mismatch repair protein msh3 OS=Aspergi... 35 0.24
sp|O13791|SLT1_SCHPO Protein slt1 OS=Schizosaccharomyces pombe G... 35 0.31
sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein OS=Dictyo... 35 0.41
sp|Q8CAF4|NHSL1_MOUSE NHS-like protein 1 OS=Mus musculus GN=Nhsl... 34 0.54
sp|P08640|MUC1_YEAST Mucin-like protein 1 OS=Saccharomyces cerev... 34 0.70
sp|Q6VMQ6|MCAF1_HUMAN Activating transcription factor 7-interact... 34 0.70
sp|Q2YX96|ISDB_STAAB Iron-regulated surface determinant protein ... 34 0.70
sp|P53950|VAC7_YEAST Vacuolar segregation protein 7 OS=Saccharom... 33 1.2
sp|O88808|TUB_RAT Tubby protein homolog OS=Rattus norvegicus GN=... 33 1.2
sp|Q5R638|AXUD1_PONAB Axin-1 up-regulated gene 1 protein OS=Pong... 33 1.6
sp|P97820|M4K4_MOUSE Mitogen-activated protein kinase kinase kin... 32 2.0
sp|P50586|TUB_MOUSE Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1 32 2.7
sp|P32583|SRP40_YEAST Suppressor protein SRP40 OS=Saccharomyces ... 32 2.7
sp|Q0V9V7|RUN3A_XENTR RUN domain-containing protein 3A OS=Xenopu... 32 2.7
sp|Q6P9X9|PARM1_RAT Protein PARM-1 OS=Rattus norvegicus GN=Cipar... 32 2.7
sp|Q9HC84|MUC5B_HUMAN Mucin-5B OS=Homo sapiens GN=MUC5B PE=1 SV=2 32 2.7
sp|Q02362|ICP4_GAHVG Trans-acting transcriptional activator prot... 32 2.7
sp|Q55GS2|SCY1_DICDI Probable inactive serine/threonine-protein ... 32 3.5
sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila ... 32 3.5
sp|A4WBJ0|PROQ_ENT38 ProP effector OS=Enterobacter sp. (strain 6... 31 4.5
sp|P46094|XCR1_HUMAN Chemokine XC receptor 1 OS=Homo sapiens GN=... 31 4.5
>sp|Q7A362|SRAP_STAAN Serine-rich adhesin for platelets
OS=Staphylococcus aureus (strain N315) GN=sraP PE=1 SV=1
Length = 2271
Score = 36.6 bits (83), Expect = 0.11
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Frame = +2
Query: 2 SADSTLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGI-- 175
SA +L +++ +S++T SQ+ + +G+ K SD+ S + +++E +
Sbjct: 808 SASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNSNSTEKSESLST 867
Query: 176 ---EQIPTRPT-AEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKE 343
+ + T + ++ + + +G+ + + ++SG +++ SNAI +T E
Sbjct: 868 STSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSE 927
Query: 344 EGSVQNSRNVAHEPAPAHSV------SETTNAHLPPSDFK 445
S +S ++++ A + S S++T+ L SD K
Sbjct: 928 SASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSK 967
>sp|Q99QY4|SRAP_STAAM Serine-rich adhesin for platelets
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=sraP PE=3 SV=1
Length = 2271
Score = 36.6 bits (83), Expect = 0.11
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Frame = +2
Query: 2 SADSTLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGI-- 175
SA +L +++ +S++T SQ+ + +G+ K SD+ S + +++E +
Sbjct: 808 SASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNSNSTEKSESLST 867
Query: 176 ---EQIPTRPT-AEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKE 343
+ + T + ++ + + +G+ + + ++SG +++ SNAI +T E
Sbjct: 868 STSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSE 927
Query: 344 EGSVQNSRNVAHEPAPAHSV------SETTNAHLPPSDFK 445
S +S ++++ A + S S++T+ L SD K
Sbjct: 928 SASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSK 967
>sp|Q1LUQ4|MFSD6_DANRE Major facilitator superfamily
domain-containing protein 6 OS=Danio rerio GN=mfsd6 PE=3
SV=1
Length = 793
Score = 36.6 bits (83), Expect = 0.11
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 71 PSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGIEQIPTRPTAEGVGLQPTGNDQPNLA 250
P+ T V T + + F +T S +R+R + I Q P R T G + +
Sbjct: 167 PTTTKVPTVHPTPSNETFFPNTSSTSQMRRRRDLIGQYPWR-TILSSGQSSGYISEHRIK 225
Query: 251 TDAAVSGKVIQNSANDAYPSNAIGKNTQDKEEGSVQNSR-NVAHEPAPAHSVSETTNAHL 427
D+ +S + +N TQ K S+ S + + + + + S TTN +L
Sbjct: 226 RDSNLSFTPAPEELANTTQTNQTSTTTQPKPSTSISTSTPSSTNTTSSSTTKSTTTNPNL 285
Query: 428 PPSDF 442
PP ++
Sbjct: 286 PPPEY 290
>sp|P10354|CMGA_RAT Chromogranin-A OS=Rattus norvegicus GN=Chga PE=1
SV=1
Length = 466
Score = 36.6 bits (83), Expect = 0.11
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Frame = +2
Query: 11 STLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTE------SEGSVRKRAEG 172
++LPS + +P + + PS K EEK++ + E E ++ + G
Sbjct: 199 TSLPSQEHGIPQTTEGSERGPSAQQQARKAKQEEKEEEEEEKEEEEEEKEEKAIAREKAG 258
Query: 173 IEQIPTRPTAEGV--GLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIG--KNTQDK 340
+++PT ++ G + D + AV+GK A++A PS G +++Q +
Sbjct: 259 PKEVPTAASSSHFYSGYKKIQKDDDGQSESQAVNGK---TGASEAVPSEGKGELEHSQQE 315
Query: 341 EEG 349
E+G
Sbjct: 316 EDG 318
>sp|Q4L9P0|SRAP_STAHJ Serine-rich adhesin for platelets
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sraP
PE=3 SV=1
Length = 3608
Score = 35.8 bits (81), Expect = 0.18
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 3/143 (2%)
Frame = +2
Query: 23 SAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDV---FSDTESEGSVRKRAEGIEQIPTR 193
S V+ ++ST+ + T+V A + S +ES + ++ +
Sbjct: 3364 STSVSDSTSASTSSSESTSTSVSDSTSASVSTSISTSISMSESSSTSASTSDSTSTSAST 3423
Query: 194 PTAEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKEEGSVQNSRNV 373
+ +G D N ++ + S + + +N S + + D S +S N
Sbjct: 3424 SESRSASHSMSGTDSNNTSSSDSKSHSISNSDSNTTSDSASASTSISDSSSTSTSDS-NA 3482
Query: 374 AHEPAPAHSVSETTNAHLPPSDF 442
+H + +HSVSE+ + S F
Sbjct: 3483 SHSFSTSHSVSESNSMSTSHSQF 3505
>sp|Q5HCP3|SRAP_STAAC Serine-rich adhesin for platelets
OS=Staphylococcus aureus (strain COL) GN=sraP PE=3 SV=1
Length = 2261
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Frame = +2
Query: 2 SADSTLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGI-- 175
SA +L +++ +S++T SQ+ + + + K SD+ S S +++E +
Sbjct: 808 SASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSDSASKSTSLSDSISNSSSTEKSESLST 867
Query: 176 ---EQIPTRPT-AEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKE 343
+ + T + ++ + + +G+ + + ++SG +++ SNAI +T E
Sbjct: 868 STSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSE 927
Query: 344 EGSVQNSRNVAHEPAPAHSV------SETTNAHLPPSDFK 445
S +S ++++ A + S S++T+ L SD K
Sbjct: 928 SASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSK 967
>sp|Q2FUW1|SRAP_STAA8 Serine-rich adhesin for platelets
OS=Staphylococcus aureus (strain NCTC 8325) GN=sraP PE=1
SV=1
Length = 2271
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Frame = +2
Query: 2 SADSTLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGI-- 175
SA +L +++ +S++T SQ+ + + + K SD+ S S +++E +
Sbjct: 808 SASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSDSASKSTSLSDSISNSSSTEKSESLST 867
Query: 176 ---EQIPTRPT-AEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKE 343
+ + T + ++ + + +G+ + + ++SG +++ SNAI +T E
Sbjct: 868 STSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSE 927
Query: 344 EGSVQNSRNVAHEPAPAHSV------SETTNAHLPPSDFK 445
S +S ++++ A + S S++T+ L SD K
Sbjct: 928 SASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSK 967
>sp|Q2FDK5|SRAP_STAA3 Serine-rich adhesin for platelets
OS=Staphylococcus aureus (strain USA300) GN=sraP PE=3
SV=1
Length = 2271
Score = 35.4 bits (80), Expect = 0.24
Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Frame = +2
Query: 2 SADSTLPSAKVAVPPASSTTHGNPSQTTVGTKNGAEEKDDVFSDTESEGSVRKRAEGI-- 175
SA +L +++ +S++T SQ+ + + + K SD+ S S +++E +
Sbjct: 808 SASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSDSASKSTSLSDSISNSSSTEKSESLST 867
Query: 176 ---EQIPTRPT-AEGVGLQPTGNDQPNLATDAAVSGKVIQNSANDAYPSNAIGKNTQDKE 343
+ + T + ++ + + +G+ + + ++SG +++ SNAI +T E
Sbjct: 868 STSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSE 927
Query: 344 EGSVQNSRNVAHEPAPAHSV------SETTNAHLPPSDFK 445
S +S ++++ A + S S++T+ L SD K
Sbjct: 928 SASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSK 967
>sp|Q4WGB7|MSH3_ASPFU DNA mismatch repair protein msh3
OS=Aspergillus fumigatus GN=msh3 PE=3 SV=1
Length = 1123
Score = 35.4 bits (80), Expect = 0.24
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Frame = +2
Query: 74 SQTTVGTKNGAEEKDDVFSD--TESEGSVRKRAEGIE--QIPTRPTAEGVGLQPTGNDQP 241
SQ++ + + K S T+ S KR+ IE + T+ AE + L+ T DQ
Sbjct: 6 SQSSPPSTQNLKRKQQTISSFFTKRAPSAEKRSNDIEDGRATTQKGAE-MPLRETAGDQN 64
Query: 242 NLATDAAVSGKVIQNS-----ANDAYPSNAIGKNTQDKEEGSVQNSRNVAHEPAPAHSVS 406
NL D G V+ + N P N G+N ++ + N+A P P S S
Sbjct: 65 NLEDDE--DGDVVVRAPKRVKTNGVDPENGFGRN--------IKEASNIARRPDPPLSSS 114
Query: 407 ETTNAH 424
+ TN +
Sbjct: 115 QRTNLY 120
>sp|B0YCF6|MSH3_ASPFC DNA mismatch repair protein msh3
OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=msh3 PE=3 SV=1
Length = 1123
Score = 35.4 bits (80), Expect = 0.24
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 9/126 (7%)
Frame = +2
Query: 74 SQTTVGTKNGAEEKDDVFSD--TESEGSVRKRAEGIE--QIPTRPTAEGVGLQPTGNDQP 241
SQ++ + + K S T+ S KR+ IE + T+ AE + L+ T DQ
Sbjct: 6 SQSSPPSTQNLKRKQQTISSFFTKRAPSAEKRSNDIEDGRATTQKGAE-MPLRETAGDQN 64
Query: 242 NLATDAAVSGKVIQNS-----ANDAYPSNAIGKNTQDKEEGSVQNSRNVAHEPAPAHSVS 406
NL D G V+ + N P N G+N ++ + N+A P P S S
Sbjct: 65 NLEDDE--DGDVVVRAPKRVKTNGVDPENGFGRN--------IKEASNIARRPDPPLSSS 114
Query: 407 ETTNAH 424
+ TN +
Sbjct: 115 QRTNLY 120
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q8N0I9 |
| Definition |
tr|Q8N0I9|Q8N0I9_CRYPV 60-kDa glycoprotein (Fragment) OS=Cryptosporidium parvum |
| Align length |
114 |
| Score (bit) |
41.2 |
| E-value |
0.051 |
| Report |
|