DK957108
Clone id TST39A01NGRL0027_I01
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_I01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GAAAAACTCTCATGACGATGCCGGGATGTTGCAGAGCGCATGGAGCAAGTGAAAGCTTGT
CTGCATATCAGGAACTCGTGCATAATCCCTTTACAAAACGCGCCTTCAGAACCAGGCGGA
TACGCGCCCCTACTTACTTATCACAGCAGGAATTGGTGCAGACTTCGTACTCGAAAAGCA
CCCTCAGGGAGAGGTGTATATTCGCAGTGAAAGTCACAGACAGTGGAAGGGATAGGCTTT
ACCGAACCCATGCCATAGTGCTAGCAGTGCCCAGGTCTAATGACGCACATCCGCCCACTT
CTCCTGCTATCAAGATATCTGAAGGTGATGGACTTAATGATGACAATCTGAATGCAAATA
GAGGTAAAAAAAGCATTGTGGTCAAATTGAGGAAATATGGTGTGGCAGGCATGTTGTCAT
ATGGCCTCTTGAACACGATCTACTACCTTGGAATGTTTTTGTTTGCTTGGTTTTACATTT
CCCCAGCTCCAAGTGGGCTTGGCTATAGAGCTGCAGCAGAGAGATTCATAAAATTGTTCG
CTCTAGTGTGGGCAGGCAGTCAAGTTACCAAGCTTCTGAGGGCCGGCTGTGCTCTTGCCC
TTGCCCCAGTGATAGACAGGGGTCTCACCTGGATCACAGATCATTCCGGGTTCCGATCAC
GGGCTGAG
■■Homology search results ■■ -
sp_hit_id O13963
Definition sp|O13963|ERG19_SCHPO Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe
Align length 62
Score (bit) 30.8
E-value 6.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957108|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_I01, 5'
(668 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O13963|ERG19_SCHPO Diphosphomevalonate decarboxylase OS=Schiz... 31 6.8
sp|P31601|DCTA_RHISN C4-dicarboxylate transport protein OS=Rhizo... 30 8.9

>sp|O13963|ERG19_SCHPO Diphosphomevalonate decarboxylase
OS=Schizosaccharomyces pombe GN=erg19 PE=2 SV=1
Length = 393

Score = 30.8 bits (68), Expect = 6.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3

Query: 486 APSGLGYRAAAERFIKLFALVWAGSQVTKLLRAGCALALAPVIDRGLTWITD--HSGFRS 659
A S GY A E +L+ L W +Q++++ R G A + + W HSG S
Sbjct: 122 ASSAAGYAAFCEAIARLYDLPWTPTQLSRIARQGSGSACRSLFGGYVAWEMGELHSGADS 181

Query: 660 RA 665
A
Sbjct: 182 VA 183


>sp|P31601|DCTA_RHISN C4-dicarboxylate transport protein
OS=Rhizobium sp. (strain NGR234) GN=dctA1 PE=2 SV=4
Length = 497

Score = 30.4 bits (67), Expect = 8.9
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +3

Query: 393 KYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYR-AAAERFIKLFALVWAGSQ-- 563
KYGVA + + +L +YL FLF + + G+ A R+IK L+ G+
Sbjct: 228 KYGVASIANLAMLIGTFYLTSFLFVFMVLGAVARYNGFSIVALIRYIKEELLLVLGTSSS 287

Query: 564 -------VTKLLRAGCALALAPVI 614
+ K+ +AGC ++ ++
Sbjct: 288 EAALPGLMNKMEKAGCKRSVVGLV 311


tr_hit_id A7R8E7
Definition tr|A7R8E7|A7R8E7_VITVI Chromosome undetermined scaffold_2493, whole genome shotgun sequence (Fragment) OS=Vitis vinifera
Align length 98
Score (bit) 135.0
E-value 2.0e-30
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957108|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_I01, 5'
(668 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R8E7|A7R8E7_VITVI Chromosome undetermined scaffold_2493, wh... 135 2e-30
tr|A7QZU9|A7QZU9_VITVI Chromosome undetermined scaffold_288, who... 135 2e-30
tr|A7QZW0|A7QZW0_VITVI Chromosome chr13 scaffold_291, whole geno... 135 3e-30
tr|B6T748|B6T748_MAIZE Putative uncharacterized protein OS=Zea m... 134 7e-30
tr|Q6DSR9|Q6DSR9_ARATH Putative uncharacterized protein OS=Arabi... 133 1e-29
tr|Q67UT7|Q67UT7_ORYSJ Os09g0442800 protein OS=Oryza sativa subs... 132 3e-29
tr|B8BCF8|B8BCF8_ORYSI Putative uncharacterized protein OS=Oryza... 132 3e-29
tr|A3BZA6|A3BZA6_ORYSJ Putative uncharacterized protein OS=Oryza... 131 3e-29
tr|A5C912|A5C912_VITVI Putative uncharacterized protein OS=Vitis... 94 8e-18
tr|A7QTI9|A7QTI9_VITVI Chromosome undetermined scaffold_169, who... 76 2e-12
tr|A5BVP7|A5BVP7_VITVI Putative uncharacterized protein OS=Vitis... 71 5e-11
tr|A7R701|A7R701_VITVI Chromosome undetermined scaffold_1511, wh... 57 8e-07
tr|A4RT03|A4RT03_OSTLU Putative uncharacterized protein Cup62 OS... 56 2e-06
tr|Q01HU5|Q01HU5_ORYSA B0403H10-OSIGBa0105A11.3 protein OS=Oryza... 53 2e-05
tr|A3AX26|A3AX26_ORYSJ Putative uncharacterized protein OS=Oryza... 53 2e-05
tr|A2XX53|A2XX53_ORYSI Putative uncharacterized protein OS=Oryza... 53 2e-05
tr|Q7FAM8|Q7FAM8_ORYSJ Os04g0600100 protein OS=Oryza sativa subs... 52 3e-05
tr|A9T5R3|A9T5R3_PHYPA Predicted protein (Fragment) OS=Physcomit... 48 5e-04
tr|Q01EJ9|Q01EJ9_OSTTA Cup62 undefined product (IC) OS=Ostreococ... 48 6e-04
tr|A8JFZ3|A8JFZ3_CHLRE Predicted protein OS=Chlamydomonas reinha... 45 0.005
tr|A9T8I4|A9T8I4_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.016
tr|A8J2H7|A8J2H7_CHLRE Predicted protein OS=Chlamydomonas reinha... 39 0.22
tr|B7FVS0|B7FVS0_PHATR Predicted protein OS=Phaeodactylum tricor... 36 2.5
tr|A7PBG1|A7PBG1_VITVI Chromosome chr16 scaffold_10, whole genom... 34 9.4
tr|Q1RL83|Q1RL83_CIOIN Zinc finger protein OS=Ciona intestinalis... 34 9.4

>tr|A7R8E7|A7R8E7_VITVI Chromosome undetermined scaffold_2493, whole
genome shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00011325001 PE=4 SV=1
Length = 123

Score = 135 bits (340), Expect = 2e-30
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = +3

Query: 375 IVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALVWA 554
++ KL++YG++G+LSYGLLNT YYL FL WFYI+PAP +GY AA ERF+K+ A+VWA
Sbjct: 1 LLKKLKRYGISGILSYGLLNTAYYLTTFLLVWFYIAPAPGRMGYLAAVERFVKIMAMVWA 60

Query: 555 GSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
GSQVTKL+RAG ALALAP++DRGL+W T F S+ +
Sbjct: 61 GSQVTKLVRAGGALALAPIVDRGLSWFTVKFKFESQGK 98


>tr|A7QZU9|A7QZU9_VITVI Chromosome undetermined scaffold_288, whole
genome shotgun sequence (Chromosome chr13 scaffold_291,
whole genome shotgun sequence) OS=Vitis vinifera
GN=GSVIVT00010833001 PE=4 SV=1
Length = 133

Score = 135 bits (340), Expect = 2e-30
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = +3

Query: 375 IVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALVWA 554
++ KL++YG++G+LSYGLLNT YYL FL WFYI+PAP +GY AA ERF+K+ A+VWA
Sbjct: 11 LLKKLKRYGISGILSYGLLNTAYYLTTFLLVWFYIAPAPGRMGYLAAVERFVKIMAMVWA 70

Query: 555 GSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
GSQVTKL+RAG ALALAP++DRGL+W T F S+ +
Sbjct: 71 GSQVTKLVRAGGALALAPIVDRGLSWFTVKFKFESQGK 108


>tr|A7QZW0|A7QZW0_VITVI Chromosome chr13 scaffold_291, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00010864001
PE=4 SV=1
Length = 133

Score = 135 bits (339), Expect = 3e-30
Identities = 61/98 (62%), Positives = 79/98 (80%)
Frame = +3

Query: 375 IVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALVWA 554
++ KL++YG++G+LSYGLLNT YYL FL WFYI+PAP +GY AA ERF+K+ A+VWA
Sbjct: 11 LLKKLKRYGISGILSYGLLNTAYYLTTFLLVWFYIAPAPGRMGYLAAVERFVKIMAMVWA 70

Query: 555 GSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
GSQVTKL+RAG ALALAP++DRGL+W T F S+ +
Sbjct: 71 GSQVTKLVRAGGALALAPIVDRGLSWFTLKFKFESQGK 108


>tr|B6T748|B6T748_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 222

Score = 134 bits (336), Expect = 7e-30
Identities = 60/98 (61%), Positives = 77/98 (78%)
Frame = +3

Query: 375 IVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALVWA 554
++ KL++YGVAG+LSYGLLNT+YY+ FL WFY++PAP +GY AA ERF+KL A+VWA
Sbjct: 100 LLEKLKRYGVAGVLSYGLLNTVYYVTAFLLVWFYVAPAPGRMGYGAAVERFVKLMAMVWA 159

Query: 555 GSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
GSQVTK+ RAG ALALAP ++RGL W T F+S +
Sbjct: 160 GSQVTKIFRAGGALALAPFVERGLKWFTVKFNFKSEGK 197


>tr|Q6DSR9|Q6DSR9_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana GN=At2g38695 PE=2 SV=1
Length = 212

Score = 133 bits (334), Expect = 1e-29
Identities = 58/100 (58%), Positives = 80/100 (80%)
Frame = +3

Query: 369 KSIVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALV 548
+ ++ KL++YG++G+LSYGLLNT+YY FL WFY++PAP +GY AAAERF+K+ A+V
Sbjct: 88 EELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWFYVAPAPGKMGYLAAAERFLKVMAMV 147

Query: 549 WAGSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
WAGSQVTKL+R G A+ALAP++DRGL+W T F S+ +
Sbjct: 148 WAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNFESQGK 187


>tr|Q67UT7|Q67UT7_ORYSJ Os09g0442800 protein OS=Oryza sativa subsp.
japonica GN=P0046G12.28-1 PE=2 SV=1
Length = 222

Score = 132 bits (331), Expect = 3e-29
Identities = 60/100 (60%), Positives = 75/100 (75%)
Frame = +3

Query: 369 KSIVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALV 548
K ++ +L++YG AG+LSYGLLNT+YY+ FL WF SPAP +GY AA ERF+KL A+V
Sbjct: 98 KDLLERLKRYGAAGVLSYGLLNTVYYVTTFLLVWFIFSPAPGKMGYAAAVERFLKLMAMV 157

Query: 549 WAGSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
WAGSQVTK+ RAG ALALAP +DRGL W T F+S +
Sbjct: 158 WAGSQVTKIFRAGGALALAPFVDRGLRWFTVRFNFKSEGK 197


>tr|B8BCF8|B8BCF8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_31542 PE=4 SV=1
Length = 222

Score = 132 bits (331), Expect = 3e-29
Identities = 60/100 (60%), Positives = 75/100 (75%)
Frame = +3

Query: 369 KSIVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALV 548
K ++ +L++YG AG+LSYGLLNT+YY+ FL WF SPAP +GY AA ERF+KL A+V
Sbjct: 98 KDLLERLKRYGAAGVLSYGLLNTVYYVTTFLLVWFIFSPAPGKMGYAAAVERFLKLMAMV 157

Query: 549 WAGSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
WAGSQVTK+ RAG ALALAP +DRGL W T F+S +
Sbjct: 158 WAGSQVTKIFRAGGALALAPFVDRGLRWFTVRFNFKSEGK 197


>tr|A3BZA6|A3BZA6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_028378 PE=4 SV=1
Length = 238

Score = 131 bits (330), Expect = 3e-29
Identities = 60/99 (60%), Positives = 75/99 (75%)
Frame = +3

Query: 372 SIVVKLRKYGVAGMLSYGLLNTIYYLGMFLFAWFYISPAPSGLGYRAAAERFIKLFALVW 551
S++ +L++YG AG+LSYGLLNT+YY+ FL WF SPAP +GY AA ERF+KL A+VW
Sbjct: 115 SLLERLKRYGAAGVLSYGLLNTVYYVTTFLLVWFIFSPAPGKMGYAAAVERFLKLMAMVW 174

Query: 552 AGSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
AGSQVTK+ RAG ALALAP +DRGL W T F+S +
Sbjct: 175 AGSQVTKIFRAGGALALAPFVDRGLRWFTVRFNFKSEGK 213


>tr|A5C912|A5C912_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_022547 PE=4 SV=1
Length = 132

Score = 94.0 bits (232), Expect = 8e-18
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +3

Query: 450 GMFLFAW-FYISPAPSGLGYRAAAERFIKLFALVWAGSQVTKLLRAGCALALAPVIDRGL 626
G AW FYI+PAP +GY AA ERF+K+ A+VWAGSQVTKL+RAG ALALAP++DRGL
Sbjct: 34 GQVASAWTFYIAPAPGRMGYLAAVERFVKIMAMVWAGSQVTKLVRAGGALALAPIVDRGL 93

Query: 627 TWITDHSGFRSRAE 668
+W T F S+ +
Sbjct: 94 SWFTVKFKFESQGK 107


>tr|A7QTI9|A7QTI9_VITVI Chromosome undetermined scaffold_169, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00006354001 PE=4 SV=1
Length = 82

Score = 75.9 bits (185), Expect = 2e-12
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +3

Query: 498 LGYRAAAERFIKLFALVWAGSQVTKLLRAGCALALAPVIDRGLTWITDHSGFRSRAE 668
+GY AA ERF+K+ A+VWAGSQVTKL+RA ALALAP++DRGL+W T F S+ +
Sbjct: 1 MGYLAAVERFVKIMAMVWAGSQVTKLVRARGALALAPIVDRGLSWFTVKFRFESQGK 57