DK957104 |
Clone id |
TST39A01NGRL0027_H21 |
Library |
TST39 |
Length |
577 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H21. 5' end sequence. |
Accession |
DK957104 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGCAGGTGAATGTAAAAGGCTTGCAAGGGCACGCAGGGACTGTACCAATGGCCATGCGGA GAGACCCCATGACAGCTGCAGCTGCTGCTATAGTCAGCATTGAGCACATTTGCAAACATC CCGAAGAATTTTTGAGTGGGGATTTGGTGCAAAGCCAAAGAGACCACTTTGTCTTGGAAG GTGCTCTGGTTTGTACTGTTGGTGAGATAGCCACATGGCCTGGTGCAAGTAATGTCATCC CTGGCGAGGTCTCTTTTACAATTGATGTTCGAGCAGAAGATGACAGTGTTCGCAAAAGGG CTGTTGTAGCCATAACAAAGAGCATTCAGGATCTTAGTCTTGCTCGTCAAGTGCATCCAA GTATTGAGATCAAGGTTTGTCATTGTTGTGGTCTTATCACTTGTGAAATACGCATTTTTC AAATTACCAAGCGTATTTTTTAAATTGCCAGTACGCCTGAGATTTGTGGACATTCCTGAA ATACGTTTGAATTTTCAAAACTTCCCAAAATATCCTTCGTATTAGTCAAAATGCCCAAAA TGTCCTTAAAAATTTCCCAAAAAATCCCTATCTCTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49434 |
Definition |
sp|O49434|AAH_ARATH Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana |
Align length |
124 |
Score (bit) |
121.0 |
E-value |
3.0e-27 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6YS26 |
Definition |
tr|A6YS26|A6YS26_PHAVU Putative allantoate amidohydrolase OS=Phaseolus vulgaris |
Align length |
135 |
Score (bit) |
136.0 |
E-value |
7.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957104|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H21, 5' (577 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6YS26|A6YS26_PHAVU Putative allantoate amidohydrolase OS=Pha... 136 7e-31 tr|B7UDC1|B7UDC1_SOYBN Allantoate amidohydrolase (Fragment) OS=G... 134 4e-30 tr|A9GYV1|A9GYV1_SOYBN Allantoate amidohydrolase OS=Glycine max ... 134 4e-30 tr|A9TZF0|A9TZF0_PHYPA Predicted protein OS=Physcomitrella paten... 133 8e-30 tr|A9RB80|A9RB80_PHYPA Predicted protein OS=Physcomitrella paten... 130 7e-29 tr|A5BDR2|A5BDR2_VITVI Putative uncharacterized protein OS=Vitis... 125 2e-27 tr|B4XH41|B4XH41_SOYBN Putative allantoate amidohydrolase (Fragm... 119 1e-25 tr|B4XH40|B4XH40_GLYSO Putative allantoate amidohydrolase (Fragm... 119 1e-25 tr|B4FA57|B4FA57_MAIZE Metallopeptidase OS=Zea mays PE=2 SV=1 117 5e-25 tr|Q655X8|Q655X8_ORYSJ Os06g0665500 protein OS=Oryza sativa subs... 117 6e-25 tr|B8B184|B8B184_ORYSI Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|A3BEE2|A3BEE2_ORYSJ Putative uncharacterized protein OS=Oryza... 117 6e-25 tr|B4XH49|B4XH49_SOYBN Putative allantoate amidohydrolase (Fragm... 114 4e-24 tr|B4XH48|B4XH48_GLYSO Putative allantoate amidohydrolase (Fragm... 114 4e-24 tr|Q89H48|Q89H48_BRAJA Bll6147 protein OS=Bradyrhizobium japonic... 99 2e-19 tr|A7P2N2|A7P2N2_VITVI Chromosome chr1 scaffold_5, whole genome ... 94 4e-18 tr|Q9A561|Q9A561_CAUCR N-carbamyl-L-amino acid amidohydrolase OS... 89 2e-16 tr|B8H0E3|B8H0E3_CAUCR N-carbamoyl-L-amino acid hydrolase OS=Cau... 89 2e-16 tr|B0T8R5|B0T8R5_CAUSK Amidase, hydantoinase/carbamoylase family... 87 9e-16 tr|B3PJH4|B3PJH4_CELJU N-carbamoyl-L-amino acid hydrolase OS=Cel... 80 8e-14 tr|B0RM53|B0RM53_XANCB N-carbamoyl-L-amino-acid hydrolase OS=Xan... 80 1e-13 tr|Q8PDQ1|Q8PDQ1_XANCP N-carbamyl-L-amino acid amidohydrolase OS... 78 3e-13 tr|Q4UZZ3|Q4UZZ3_XANC8 N-carbamyl-L-amino acid amidohydrolase OS... 78 3e-13 tr|A3VU73|A3VU73_9PROT N-carbamoyl-L-amino acid amidohydrolase O... 78 3e-13 tr|A6SVA4|A6SVA4_JANMA Bifuctionnal uncharacterized/N-carbamoyl-... 77 7e-13 tr|A5FXP1|A5FXP1_ACICJ Amidase, hydantoinase/carbamoylase family... 74 4e-12 tr|A7IKH5|A7IKH5_XANP2 Amidase, hydantoinase/carbamoylase family... 74 6e-12 tr|A4CX13|A4CX13_SYNPV N-carbamoyl-L-amino acid amidohydrolase O... 74 6e-12 tr|B5ZKQ5|B5ZKQ5_GLUDA Amidase, hydantoinase/carbamoylase family... 74 7e-12 tr|A4BCZ3|A4BCZ3_9GAMM N-carbamoyl-L-amino acid amidohydrolase O... 74 7e-12
>tr|A6YS26|A6YS26_PHAVU Putative allantoate amidohydrolase OS=Phaseolus vulgaris GN=AAH PE=2 SV=2 Length = 483
Score = 136 bits (343), Expect = 7e-31 Identities = 71/135 (52%), Positives = 91/135 (67%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CKHPEEFLS D S L Sbjct: 266 KVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEFLSYDAHCSDSTVKSLSS 325
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 +LVCTVGEI+TWP ASNVIPG+V++T+D+RA DD R+ + ++K I + R V Sbjct: 326 SLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCI 385
Query: 363 IEIKVCHCCGLITCE 407 IE K H G + C+ Sbjct: 386 IEHK--HDAGAVICD 398
>tr|B7UDC1|B7UDC1_SOYBN Allantoate amidohydrolase (Fragment) OS=Glycine max PE=4 SV=1 Length = 479
Score = 134 bits (337), Expect = 4e-30 Identities = 70/135 (51%), Positives = 91/135 (67%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CKHPEE+LS D S L Sbjct: 262 KVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLSS 321
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 +LVCTVGEI+TWP ASNVIPG+V++T+D+RA DD R+ + ++K I + R V Sbjct: 322 SLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCI 381
Query: 363 IEIKVCHCCGLITCE 407 IE K H G + C+ Sbjct: 382 IEHK--HDAGAVICD 394
>tr|A9GYV1|A9GYV1_SOYBN Allantoate amidohydrolase OS=Glycine max GN=aah PE=2 SV=1 Length = 483
Score = 134 bits (337), Expect = 4e-30 Identities = 70/135 (51%), Positives = 91/135 (67%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CKHPEE+LS D S L Sbjct: 266 KVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLSS 325
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 +LVCTVGEI+TWP ASNVIPG+V++T+D+RA DD R+ + ++K I + R V Sbjct: 326 SLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCI 385
Query: 363 IEIKVCHCCGLITCE 407 IE K H G + C+ Sbjct: 386 IEHK--HDAGAVICD 398
>tr|A9TZF0|A9TZF0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_153047 PE=4 SV=1 Length = 455
Score = 133 bits (334), Expect = 8e-30 Identities = 76/134 (56%), Positives = 89/134 (66%), Gaps = 1/134 (0%) Frame = +3
Query: 6 VNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLE-G 182 V V G QGHAGTVPM+MR+DPM AAA +IVSIE+IC HPE+ + G + V G Sbjct: 224 VRVHGSQGHAGTVPMSMRKDPMIAAAQSIVSIENICTHPEKGVGGSRGATAMSTAVNHAG 283
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 A+VCTVGEI +WPGASNVIPGEV FTIDVR++DDS R+ VV I I + R V S Sbjct: 284 AIVCTVGEIHSWPGASNVIPGEVMFTIDVRSKDDSDRETNVVRIEGGIHKICRKRGVRCS 343
Query: 363 IEIKVCHCCGLITC 404 IE K H I C Sbjct: 344 IERK--HEANAIAC 355
>tr|A9RB80|A9RB80_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111019 PE=4 SV=1 Length = 459
Score = 130 bits (326), Expect = 7e-29 Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 1/134 (0%) Frame = +3
Query: 6 VNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLE-G 182 V V+G QGHAGTVPM+MR+DPM AAA +IV+IE+IC HPE+ + G + V G Sbjct: 224 VRVEGSQGHAGTVPMSMRKDPMIAAAQSIVAIENICTHPEKGVGGSRGATAMSTAVNHAG 283
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 A+VCTVGEI +WPGASNVIPGEV FTIDVR++DDS R+ VV I I+ + R V Sbjct: 284 AIVCTVGEIHSWPGASNVIPGEVMFTIDVRSKDDSNRETNVVRIESEIRKICRKRGVGCV 343
Query: 363 IEIKVCHCCGLITC 404 IE K H I C Sbjct: 344 IERK--HEANAIGC 355
>tr|A5BDR2|A5BDR2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029535 PE=4 SV=1 Length = 321
Score = 125 bits (314), Expect = 2e-27 Identities = 67/141 (47%), Positives = 94/141 (66%), Gaps = 3/141 (2%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLE- 179 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CK P++FLS D Q + F +E Sbjct: 104 KVTVRGSQGHAGTVPMSMRQDPMAAAAELIVLLESLCKRPKDFLSYD---GQCNGFAVES 160
Query: 180 --GALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQV 353 G+LVCTVGEI++WP ASNVIPG+V+FT+D+RA DD R+ + ++ + + R V Sbjct: 161 LSGSLVCTVGEISSWPSASNVIPGQVTFTVDLRAIDDMGREAVLYELSDRMYQICEKRSV 220
Query: 354 HPSIEIKVCHCCGLITCEIRI 416 +IE K H + C+ + Sbjct: 221 SCTIERK--HDANAVICDTEL 239
>tr|B4XH41|B4XH41_SOYBN Putative allantoate amidohydrolase (Fragment) OS=Glycine max PE=4 SV=1 Length = 195
Score = 119 bits (298), Expect = 1e-25 Identities = 66/135 (48%), Positives = 86/135 (63%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CKHPEE+LS D S L Sbjct: 23 KVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLSS 82
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 +LVCTVGEI+TWP ASN V++T+D+RA DD R+ + ++K I + R V Sbjct: 83 SLVCTVGEISTWPSASN-----VTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCI 137
Query: 363 IEIKVCHCCGLITCE 407 IE K H G + C+ Sbjct: 138 IEHK--HDAGAVICD 150
>tr|B4XH40|B4XH40_GLYSO Putative allantoate amidohydrolase (Fragment) OS=Glycine soja PE=4 SV=1 Length = 195
Score = 119 bits (298), Expect = 1e-25 Identities = 66/135 (48%), Positives = 86/135 (63%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V+G QGHAGTVPM+MR+DPM AAA IV +E +CKHPEE+LS D S L Sbjct: 23 KVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVVLESLCKHPEEYLSYDGHCSDSTVKSLSS 82
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 +LVCTVGEI+TWP ASN V++T+D+RA DD R+ + ++K I + R V Sbjct: 83 SLVCTVGEISTWPSASN-----VTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCI 137
Query: 363 IEIKVCHCCGLITCE 407 IE K H G + C+ Sbjct: 138 IEHK--HDAGAVICD 150
>tr|B4FA57|B4FA57_MAIZE Metallopeptidase OS=Zea mays PE=2 SV=1 Length = 505
Score = 117 bits (293), Expect = 5e-25 Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 4/141 (2%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V V G QGHAGTVPM +RRDPM AAA +V++E +CK P L+ D S L G Sbjct: 266 KVIVDGSQGHAGTVPMKLRRDPMVAAAELVVTLERLCKEPNSLLTYDEECSCFTEESLAG 325
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 LVCTVGE+ TWP ASNVIPG+V+FT+D+RA DD VR+ V + ++ + R V Sbjct: 326 -LVCTVGELNTWPSASNVIPGQVNFTVDIRAMDDQVRETIVTSFSRLVLQKCDDRLVDCK 384
Query: 363 IEIK----VCHCCGLITCEIR 413 +E K HC +T +++ Sbjct: 385 VEHKHSAAATHCDPELTSQLK 405
>tr|Q655X8|Q655X8_ORYSJ Os06g0665500 protein OS=Oryza sativa subsp. japonica GN=P0473H04.24 PE=2 SV=1 Length = 491
Score = 117 bits (292), Expect = 6e-25 Identities = 62/138 (44%), Positives = 86/138 (62%) Frame = +3
Query: 3 QVNVKGLQGHAGTVPMAMRRDPMTAAAAAIVSIEHICKHPEEFLSGDLVQSQRDHFVLEG 182 +V + G QGHAGTVPM +RRDPM AAA ++++E +CK P +FL+ D L G Sbjct: 261 KVIINGSQGHAGTVPMKLRRDPMVAAAELVLTLETLCKEPNKFLTYDEECGCFTEESLAG 320
Query: 183 ALVCTVGEIATWPGASNVIPGEVSFTIDVRAEDDSVRKRAVVAITKSIQDLSLARQVHPS 362 LVCTVGE+ TWP ASNVIPG+V+FT+D+RA DD VR+ V + ++ + R V + Sbjct: 321 -LVCTVGELLTWPSASNVIPGQVNFTVDIRAMDDKVRETIVTSFSRLVLQRCDDRLVDCA 379
Query: 363 IEIKVCHCCGLITCEIRI 416 +E K H C+ + Sbjct: 380 VEQK--HAAAATPCDAEL 395
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