DK957009 |
Clone id |
TST39A01NGRL0027_D20 |
Library |
TST39 |
Length |
552 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_D20. 5' end sequence. |
Accession |
DK957009 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1105Contig1 |
Sequence |
CATAGCTAGACCTCCCCAGCTCCTGCTGAAGATATACACAGAAGGAAGAAGGGCATTCAT CAGGTTTCTGTCCTTCTTTCTAGGCGTGTCTAGATCGGCTCTCATTTCCCTCACAGATCG CGATTTAGAGCTCTTAGTTCATTTTGTCTAGTTCGCCATGGCCACCGCCGAGAACCCTGC TGCTTCTGCTCAAACGAAGCTTGCCGATCTGCACCGCCCGCCCACTCTGCCCTTGCCCGT CCATGGAAAGAACCCGCTGTTCGTCGACGGGCCAGTGTCGAAGCCTCCACATTGGCGCAA AGCCGCGGAGGCTCTGCAGCCCAGCCATTTCGATGAAGTGAAGAGGATGATAAGGCAGTT CTGGGAGAGTGAGAAGGTTGTGCTGAGAGGGAGTAGCCTCACGGTTGGCCAAGTCACAGC GGTCACCCAGAGGGCCTCTGTCATAGTCGAGCTTGATGAAACATAAGCCAAACATAGAGT GGATGAAAGCTCCAACTGGGTCTTCAACAACATTCTCAAAGGCACTGACACATATGGTGT TACCACTGGATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P52777 |
Definition |
sp|P52777|PALY_PINTA Phenylalanine ammonia-lyase OS=Pinus taeda |
Align length |
91 |
Score (bit) |
99.0 |
E-value |
1.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5EP63 |
Definition |
tr|Q5EP63|Q5EP63_EQUAR Phenylalanine ammonia lyase OS=Equisetum arvense |
Align length |
122 |
Score (bit) |
199.0 |
E-value |
6.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957009|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_D20, 5' (552 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5EP63|Q5EP63_EQUAR Phenylalanine ammonia lyase OS=Equisetum ... 199 6e-50 tr|Q5EP57|Q5EP57_9MARC Phenylalanine ammonia lyase (Fragment) OS... 176 7e-43 tr|B8LR86|B8LR86_PICSI Putative uncharacterized protein OS=Picea... 135 2e-30 tr|Q9LEP1|Q9LEP1_BETVE Phenylalanine ammonia-lyase (Fragment) OS... 124 3e-27 tr|A5BDI5|A5BDI5_VITVI Putative uncharacterized protein OS=Vitis... 123 7e-27 tr|A7PE21|A7PE21_VITVI Chromosome chr11 scaffold_13, whole genom... 122 1e-26 tr|A7PE13|A7PE13_VITVI Chromosome chr11 scaffold_13, whole genom... 122 1e-26 tr|A7PE10|A7PE10_VITVI Chromosome chr11 scaffold_13, whole genom... 122 2e-26 tr|Q9M3U1|Q9M3U1_BETVE Phenylalanine ammonia-lyase (Fragment) OS... 118 2e-25 tr|Q5EP59|Q5EP59_BLESP Phenylalanine ammonia lyase OS=Blechnum s... 114 3e-24 tr|Q5EP60|Q5EP60_9FILI Phenylalanine ammonia lyase (Fragment) OS... 111 2e-23 tr|Q5EP65|Q5EP65_ISOLA Phenylalanine ammonia lyase OS=Isoetes la... 108 2e-22 tr|Q7XJC4|Q7XJC4_PINPS Phenylalanine ammonia-lyase OS=Pinus pina... 107 3e-22 tr|Q7XJC3|Q7XJC3_PINPS Phenylalanine ammonia-lyase OS=Pinus pina... 107 3e-22 tr|Q1H8P5|Q1H8P5_PICAB Phenylalanine lyase (Fragment) OS=Picea a... 103 5e-21 tr|A9NVP8|A9NVP8_PICSI Putative uncharacterized protein OS=Picea... 103 5e-21 tr|B0ZQ27|B0ZQ27_GINBI Phenylalanine ammonia-lyase OS=Ginkgo bil... 103 8e-21 tr|A7UHB6|A7UHB6_GINBI Phenylalanine ammonia-lyase OS=Ginkgo bil... 103 8e-21 tr|Q5EP66|Q5EP66_9TRAC Phenylalanine ammonia lyase OS=Diphasiast... 102 1e-20 tr|Q5EP62|Q5EP62_PSINU Phenylalanine ammonia lyase OS=Psilotum n... 100 7e-20 tr|A9RP26|A9RP26_PHYPA Predicted protein OS=Physcomitrella paten... 97 4e-19 tr|A9RYH4|A9RYH4_PHYPA Predicted protein OS=Physcomitrella paten... 97 6e-19 tr|A5C6N0|A5C6N0_VITVI Putative uncharacterized protein OS=Vitis... 97 6e-19 tr|Q8SAS7|Q8SAS7_PINSY Phenylalanine ammonia-lyase (Fragment) OS... 97 7e-19 tr|Q8SAS6|Q8SAS6_PINSY Phenylalanine ammonia-lyase (Fragment) OS... 97 7e-19 tr|Q8RUZ3|Q8RUZ3_PINSY Phenylalanine ammonia-lyase (Fragment) OS... 97 7e-19 tr|A9REV6|A9REV6_PHYPA Predicted protein OS=Physcomitrella paten... 97 7e-19 tr|Q8RV49|Q8RV49_PINSY Phenylalanine ammonia-lyase (Fragment) OS... 96 1e-18 tr|A9RQT7|A9RQT7_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A9U139|A9U139_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 4e-18
>tr|Q5EP63|Q5EP63_EQUAR Phenylalanine ammonia lyase OS=Equisetum arvense GN=PAL PE=2 SV=1 Length = 778
Score = 199 bits (507), Expect = 6e-50 Identities = 99/122 (81%), Positives = 109/122 (89%), Gaps = 2/122 (1%) Frame = +2
Query: 191 QTKLADLHRPPTLPLPVHGKNPLFVDG--PVSKPPHWRKAAEALQPSHFDEVKRMIRQFW 364 Q KLA+LHRPPTLPLPV GKNPLFVD PV+KPPHW+KAAEALQ SH++E++RMIRQF Sbjct: 8 QKKLAELHRPPTLPLPVQGKNPLFVDSKEPVAKPPHWQKAAEALQSSHYEEIRRMIRQFL 67
Query: 365 ESEKVVLRGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVT 544 E+EKVVL+GSSLTVGQVTAVTQR+ V VELDE AK RVDESSNWV NNILKGTDTYGVT Sbjct: 68 ETEKVVLQGSSLTVGQVTAVTQRSEVAVELDEATAKARVDESSNWVLNNILKGTDTYGVT 127
Query: 545 TG 550 TG Sbjct: 128 TG 129
>tr|Q5EP57|Q5EP57_9MARC Phenylalanine ammonia lyase (Fragment) OS=Pellia epiphylla GN=PAL PE=2 SV=1 Length = 744
Score = 176 bits (446), Expect = 7e-43 Identities = 86/104 (82%), Positives = 94/104 (90%) Frame = +2
Query: 239 VHGKNPLFVDGPVSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVLRGSSLTVGQVT 418 +HGKN LFVDGPV+KPPHW KAAEALQ SH++EV+RMIRQF+ESEKV+LRGSSLTVGQVT Sbjct: 2 LHGKNLLFVDGPVAKPPHWAKAAEALQTSHYEEVRRMIRQFYESEKVILRGSSLTVGQVT 61
Query: 419 AVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 AVTQRASVIV+LDE AK RVDESSNWV N L GTDTYGVTTG Sbjct: 62 AVTQRASVIVQLDEAEAKSRVDESSNWVLNRTLTGTDTYGVTTG 105
>tr|B8LR86|B8LR86_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 790
Score = 135 bits (339), Expect = 2e-30 Identities = 73/117 (62%), Positives = 87/117 (74%), Gaps = 2/117 (1%) Frame = +2
Query: 206 DLHRPPTLPLPVH--GKNPLFVDGPVSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKV 379 +L RPPTLPLP GK+P V P HW+KAAEA+Q SH++EV++MI QF + KV Sbjct: 22 ELCRPPTLPLPESFGGKSP----DHVIIPTHWKKAAEAMQCSHYEEVRKMIGQFKATHKV 77
Query: 380 VLRGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 VLRG++LTV +VTAVT+RA V VELDE AK RV+ S WV NNI KGTDTYGVTTG Sbjct: 78 VLRGTTLTVAEVTAVTRRAEVKVELDEVSAKQRVERSYQWVANNIAKGTDTYGVTTG 134
>tr|Q9LEP1|Q9LEP1_BETVE Phenylalanine ammonia-lyase (Fragment) OS=Betula verrucosa GN=pal2 PE=4 SV=1 Length = 436
Score = 124 bits (311), Expect = 3e-27 Identities = 64/114 (56%), Positives = 83/114 (72%), Gaps = 2/114 (1%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFV--DGPVSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVLR 388 RPPTLPLP N + V + +S P HW++AAEALQ +HFDEV RM+ QF + + V ++ Sbjct: 16 RPPTLPLPKDSVNLICVSENSHLSAPLHWKRAAEALQCTHFDEVCRMVSQFAKVQSVDIQ 75
Query: 389 GSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 G+SLTV QVTA+ +R+ V V LDE A+ RV +S+NWV NI +GTDTYGVTTG Sbjct: 76 GTSLTVAQVTAIARRSEVKVNLDEAAARERVAKSANWVAENISRGTDTYGVTTG 129
>tr|A5BDI5|A5BDI5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038916 PE=4 SV=1 Length = 670
Score = 123 bits (308), Expect = 7e-27 Identities = 64/115 (55%), Positives = 80/115 (69%), Gaps = 3/115 (2%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFVDGP---VSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVL 385 RPPTLPLPV +NP + G V PPHW+KAAEALQ HFDEV M+ QF ++ V + Sbjct: 16 RPPTLPLPVEEENPFXILGESRHVLAPPHWKKAAEALQCGHFDEVCAMVSQFAHAQTVDI 75
Query: 386 RGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 +G++LTV QVTA+ + V V LDE A+ RV S++WV NI +GTDTYGVTTG Sbjct: 76 QGTALTVAQVTALARGDHVRVALDEAVARGRVTRSADWVAENISRGTDTYGVTTG 130
>tr|A7PE21|A7PE21_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016500001 PE=4 SV=1 Length = 752
Score = 122 bits (307), Expect = 1e-26 Identities = 64/115 (55%), Positives = 80/115 (69%), Gaps = 3/115 (2%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFVDGP---VSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVL 385 RPPTLPLPV +NP + G V PPHW+KAAEALQ HFDEV M+ QF ++ V + Sbjct: 16 RPPTLPLPVEEENPFCILGESRHVLAPPHWKKAAEALQCGHFDEVCAMVSQFAHAQTVDI 75
Query: 386 RGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 +G++LTV QVTA+ + V V LDE A+ RV S++WV NI +GTDTYGVTTG Sbjct: 76 QGTALTVAQVTALARGDHVRVALDEAAARGRVTRSADWVAENISRGTDTYGVTTG 130
>tr|A7PE13|A7PE13_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016492001 PE=4 SV=1 Length = 797
Score = 122 bits (307), Expect = 1e-26 Identities = 64/115 (55%), Positives = 80/115 (69%), Gaps = 3/115 (2%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFVDGP---VSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVL 385 RPPTLPLPV +NP + G V PPHW+KAAEALQ HFDEV M+ QF ++ V + Sbjct: 47 RPPTLPLPVEEENPFSILGESRHVLAPPHWKKAAEALQCGHFDEVCAMVSQFAHAQTVDI 106
Query: 386 RGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 +G++LTV QVTA+ + V V LDE A+ RV S++WV NI +GTDTYGVTTG Sbjct: 107 QGTALTVAQVTALARGDHVRVALDEAVARGRVTRSADWVAENISRGTDTYGVTTG 161
>tr|A7PE10|A7PE10_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016489001 PE=4 SV=1 Length = 766
Score = 122 bits (305), Expect = 2e-26 Identities = 64/115 (55%), Positives = 80/115 (69%), Gaps = 3/115 (2%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFVDGP---VSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVL 385 RPPTLPLPV +NP + G V PPHW+KAAEALQ HFDEV M+ QF ++ V + Sbjct: 16 RPPTLPLPVEEENPFSILGESRHVLAPPHWKKAAEALQCGHFDEVCGMVSQFAHAQTVDI 75
Query: 386 RGSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 +G++LTV QVTA+ + V V LDE A+ RV S++WV NI +GTDTYGVTTG Sbjct: 76 QGTALTVAQVTALARGDHVRVALDEEAARGRVTRSADWVAENISRGTDTYGVTTG 130
>tr|Q9M3U1|Q9M3U1_BETVE Phenylalanine ammonia-lyase (Fragment) OS=Betula verrucosa GN=pal1 PE=4 SV=1 Length = 435
Score = 118 bits (296), Expect = 2e-25 Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 2/114 (1%) Frame = +2
Query: 215 RPPTLPLPVHGKNPLFV--DGPVSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVLR 388 RP T+PLP N + V + +S P HW+KAAEALQ +HFDEV RM+ QF + + + + Sbjct: 8 RPATIPLPKDTANLICVSENSHMSAPLHWKKAAEALQCTHFDEVCRMVSQFAKVQSIDIE 67
Query: 389 GSSLTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTTG 550 G+SLTV QVTA+ +R+ V V L+E A+ RV +S+NWV +NI +GTDTYGVTTG Sbjct: 68 GTSLTVAQVTAIARRSEVKVNLNEAAARDRVAKSANWVADNISRGTDTYGVTTG 121
>tr|Q5EP59|Q5EP59_BLESP Phenylalanine ammonia lyase OS=Blechnum spicant GN=PAL PE=2 SV=1 Length = 745
Score = 114 bits (286), Expect = 3e-24 Identities = 59/110 (53%), Positives = 77/110 (70%) Frame = +2
Query: 218 PPTLPLPVHGKNPLFVDGPVSKPPHWRKAAEALQPSHFDEVKRMIRQFWESEKVVLRGSS 397 PP L L H VDG +++ PHW KAAEA+Q SHF+EVK M+R+F ++++VVLRGS Sbjct: 11 PPALCLSGH------VDGKIAETPHWLKAAEAMQGSHFEEVKCMVREFLDTKEVVLRGSG 64
Query: 398 LTVGQVTAVTQRASVIVELDET*AKHRVDESSNWVFNNILKGTDTYGVTT 547 LTVGQV AVT R + V LDE AK RVDES++WV N+ K T +G ++ Sbjct: 65 LTVGQVAAVTDRVGIHVALDEADAKARVDESADWVLKNVGKFTTGFGASS 114
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