DK956989 |
Clone id |
TST39A01NGRL0027_C24 |
Library |
TST39 |
Length |
644 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_C24. 5' end sequence. |
Accession |
DK956989 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTCCTTTGATTACCAAAGGAGGAATTTCTCTGCTACAGATAAATTCCTCCTTTGATTACC AAAGAAAGGTTTCACAACCTTTGCCAAAAGCACCTCGGCATTGAATCTAAAGAGATGTGT GAGGTGGTTGCGCTCTCTCTCAGTAGTACTGGAGATTTGATTTATTTTCCTTCCCTTGAG CTTGTGGTAATCGACACACAATGGTTTTGTAAAAAAATTATGGGGGAGCTTATACACTTT AATATGGATTTTTTGGACTCAGAGCAAGTGTTTTTCCCACTCCAACTGTTACAGAGCTGT TTTGAGAAGGAAATGAGCTGAAGGCCGGTCAGCAAGTGGGATTTTTCATGGGTCAGGGGG CCATCAAAAACCCATGAGCTGAACAAGGTTTCGGGCTATGCCGTGGTGAAACTTCTAATG GGCCTGCGGCTGGCTTGCCCAAGGGACTACAACCAAGAGGACTCTGATATTTTTATCCCG GCAACCCTATCGAGTGCTAGGGGGAGAATTCGGCCAAGCAAGTATCTTAAACTAGATGAA AGCTGTGCAACATATTCATTTATTGAGAGAAGGTGGTCAGTTGCAGATTCCAATTGCACG TTTCTTACACCCGGAATATTTCCCTTGGTTCAGGTCACCTTCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O27190 |
Definition |
sp|O27190|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanobacterium thermoautotrophicum |
Align length |
57 |
Score (bit) |
32.3 |
E-value |
2.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SDC3 |
Definition |
tr|A9SDC3|A9SDC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
214 |
Score (bit) |
65.9 |
E-value |
2.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956989|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_C24, 5' (644 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SDC3|A9SDC3_PHYPA Predicted protein OS=Physcomitrella paten... 66 2e-09 tr|A9TX66|A9TX66_PHYPA Predicted protein OS=Physcomitrella paten... 64 1e-08 tr|A7P0F5|A7P0F5_VITVI Chromosome chr19 scaffold_4, whole genome... 62 4e-08 tr|A5C204|A5C204_VITVI Putative uncharacterized protein OS=Vitis... 62 4e-08 tr|Q9FJ57|Q9FJ57_ARATH Gb|AAD39572.1 OS=Arabidopsis thaliana GN=... 56 2e-06 tr|Q75LL9|Q75LL9_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 40 0.12 tr|B8AJX0|B8AJX0_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.4 tr|Q4KJK9|Q4KJK9_PSEF5 Polyhydroxyalkanoate granule-associated p... 35 3.0 tr|Q70WQ8|Q70WQ8_THETE Phosphoenolpyruvate synthetase OS=Thermop... 35 3.9 tr|A5IXV9|A5IXV9_MYCAP Putative uncharacterized protein OS=Mycop... 35 5.1 tr|B6NM37|B6NM37_BRAFL Putative uncharacterized protein (Fragmen... 35 5.1 tr|B6KGQ1|B6KGQ1_TOXGO Zinc finger (C3HC4 RING finger) protein, ... 35 5.1 tr|A7IWW8|A7IWW8_PBCVN Putative uncharacterized protein B443R OS... 34 8.8 tr|B6MLA7|B6MLA7_BRAFL Putative uncharacterized protein OS=Branc... 34 8.8 tr|A3MSY1|A3MSY1_PYRCJ Phosphoenolpyruvate synthase OS=Pyrobacul... 34 8.8
>tr|A9SDC3|A9SDC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_164300 PE=4 SV=1 Length = 1670
Score = 65.9 bits (159), Expect = 2e-09 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 18/214 (8%) Frame = +1
Query: 49 PLITKERFHNLCQKHLGIE---------SKEMCEVVALSLSSTGDLIYFPSLELVVIDTQ 201 PLI F LC K ++ ++E + VA ++ G+L++F L+ +V+D Sbjct: 961 PLIQWSDFSVLCSKVPALKRLQGQDIKIAEEREKAVARAMHDAGELLFFDGLDFMVVDPN 1020
Query: 202 WFCKKIMGELIHFNMDFLDSEQVFFPLQLLQSCFEKEMS*RPVSKWDFSWVRGPS-KTHE 378 WFC +IMG +++ N + +Q PL + Q F K + V + F + P K Sbjct: 1021 WFCHEIMGRILNLNSSMVVLKQ---PL-IDQKGFTKREHLKKVLEASFCKNKNPHFKGRR 1076
Query: 379 LNKVSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATL-----SSARGR---IRPSKYLKL 534 + V +V+L++ L L ++ + S ++IPA L +ARG P +Y ++ Sbjct: 1077 VKGVVTEDLVQLMVKLNLCFEQNPGDKTSGVYIPAALHKPSEEAARGERPLSWPCRYGQV 1136
Query: 535 DESCATYSFIERRWSVADSNCTFLTPGIFPLVQV 636 E T+ + R + T LT G FP +QV Sbjct: 1137 SEHDLTH--VGWRLKCENPELTTLTRGFFPRLQV 1168
>tr|A9TX66|A9TX66_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172493 PE=4 SV=1 Length = 1705
Score = 63.5 bits (153), Expect = 1e-08 Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 18/214 (8%) Frame = +1
Query: 49 PLITKERFHNLCQKHLGIE---------SKEMCEVVALSLSSTGDLIYFPSLELVVIDTQ 201 PLI F LC K ++ ++E + VA ++ G+L++F L+ +V+D Sbjct: 1058 PLIKWSDFSLLCSKVPALKRLQGQDSKVAEERQKAVARAMHDAGELLFFDGLDFMVVDPN 1117
Query: 202 WFCKKIMGELIHFNMDFLDSEQVFFPLQLL-QSCFEKEMS*RPVSKWDFSWVRGP-SKTH 375 WFC +IMG ++ LDS + L+ + F K + V + F + P K Sbjct: 1118 WFCHEIMGRILS-----LDSTLLVLKHPLIDEHGFTKREHLKKVLEASFCKNKNPLFKGR 1172
Query: 376 ELNKVSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATLS-----SARGRIRPSKYLKLDE 540 ++ V +V+L++ L L ++ + S I+IPA+LS +ARG RP + + Sbjct: 1173 KVRGVIPEDLVQLMVKLNLCFEQNPGDKTSGIYIPASLSNPSEAAARGE-RPLSWANGYD 1231
Query: 541 SCATYSFIERRWSVADSN--CTFLTPGIFPLVQV 636 + + W + N T LT G FP +QV Sbjct: 1232 QVSDDELLHVGWRLKCENPELTTLTLGFFPRLQV 1265
>tr|A7P0F5|A7P0F5_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027211001 PE=4 SV=1 Length = 1362
Score = 61.6 bits (148), Expect = 4e-08 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 2/201 (0%) Frame = +1
Query: 28 LCYR*IPPLITKERFHNLCQKHLGIESKEMCEVVALSLSSTGDLIYFPSLELVVIDTQWF 207 LC +P L + R N ++ +G+ + +A L G++IYF L +++D +WF Sbjct: 734 LCQVKVPSLRIRSRHDN--KEKVGMRRR----AIANCLHHIGEVIYFNELGFLILDCEWF 787
Query: 208 CKKIMGELIHFN-MDFLDSEQVFFPLQLLQSCFEKEMS*RPVSKWDFSWVRG-PSKTHEL 381 C +++G+LI + +E F + L+ + S + G SK E Sbjct: 788 CGEVLGQLIRLDARKQSTTENGFITRKELEKILRGSLQ---------SQIPGMGSKVFEN 838
Query: 382 NKVSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATLSSARGRIRPSKYLKLDESCATYSF 561 + S +V++++ L L +D + +S + IP+ L RG RP ++ + C + Sbjct: 839 LEASD--LVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRG--RPQRWQLIAPDCV---Y 891
Query: 562 IERRWSVADSNCTFLTPGIFP 624 R DS+ FLTPG FP Sbjct: 892 SGRHLECDDSSHMFLTPGFFP 912
>tr|A5C204|A5C204_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003518 PE=4 SV=1 Length = 1400
Score = 61.6 bits (148), Expect = 4e-08 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 2/201 (0%) Frame = +1
Query: 28 LCYR*IPPLITKERFHNLCQKHLGIESKEMCEVVALSLSSTGDLIYFPSLELVVIDTQWF 207 LC +P L + R N ++ +G+ + +A L G++IYF L +++D +WF Sbjct: 745 LCQVKVPSLRIRSRHDN--KEKVGMRRR----AIANCLHHIGEVIYFNELGFLILDCEWF 798
Query: 208 CKKIMGELIHFN-MDFLDSEQVFFPLQLLQSCFEKEMS*RPVSKWDFSWVRG-PSKTHEL 381 C +++G+LI + +E F + L+ + S + G SK E Sbjct: 799 CGEVLGQLIRLDARKQSTTENGFITRKELEKILRGSLQ---------SQIPGMGSKVFEN 849
Query: 382 NKVSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATLSSARGRIRPSKYLKLDESCATYSF 561 + S +V++++ L L +D + +S + IP+ L RG RP ++ + C + Sbjct: 850 LEASD--LVRMMLKLELCYEQDPSDPNSLLLIPSILEEGRG--RPQRWQLIAPDCV---Y 902
Query: 562 IERRWSVADSNCTFLTPGIFP 624 R DS+ FLTPG FP Sbjct: 903 SGRHLECDDSSHMFLTPGFFP 923
>tr|Q9FJ57|Q9FJ57_ARATH Gb|AAD39572.1 OS=Arabidopsis thaliana GN=At5g55540 PE=4 SV=1 Length = 1380
Score = 56.2 bits (134), Expect = 2e-06 Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 5/208 (2%) Frame = +1
Query: 28 LCYR*IPPLITKERFHNLCQKHLGIESKEMCEVVALSLSSTGDLIYFPSLELVVIDTQWF 207 LC +P L K R N+ +E++ +A L G++IYF L +++D +WF Sbjct: 741 LCQFKVPSLRIKSRNENIQI----VETRR--HAIATCLHQMGEVIYFDDLGFLILDYEWF 794
Query: 208 CKKIMGELIHFNMDFLDSEQVFFPLQLLQSCFEKE--MS*RPVSKWDFSWVRGP---SKT 372 C +++ +LI ++ QS E+ +S + + K S ++ P + Sbjct: 795 CGEVLTQLIKLDV-------------RKQSTGERNGFVSRKELEKTLRSSLQSPIPGMTS 841
Query: 373 HELNKVSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATLSSARGRIRPSKYLKLDESCAT 552 L +VK++ + L +D + DS + +P+ L RG+ + K+ C Sbjct: 842 KVLEHFDACDLVKMMKKVELCYEQDPSSPDSSLLVPSILEEGRGKTQ--KWQINTHDCV- 898
Query: 553 YSFIERRWSVADSNCTFLTPGIFPLVQV 636 + R DS+ FLT G FP +QV Sbjct: 899 --YSGRHLQCDDSSHMFLTAGFFPRLQV 924
>tr|Q75LL9|Q75LL9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=OSJNBa0047E24.18 PE=4 SV=1 Length = 1239
Score = 40.0 bits (92), Expect = 0.12 Identities = 43/203 (21%), Positives = 93/203 (45%) Frame = +1
Query: 28 LCYR*IPPLITKERFHNLCQKHLGIESKEMCEVVALSLSSTGDLIYFPSLELVVIDTQWF 207 +C IP L + R H+ +K ++++ VA SL G++I+F L +++++ +WF Sbjct: 704 ICQLSIPVLRLRSR-HDNAEK---LDTRR--HAVAKSLHDLGEIIFFEELGVLIMNCEWF 757
Query: 208 CKKIMGELIHFNMDFLDSEQVFFPLQLLQSCFEKEMS*RPVSKWDFSWVRGPSKTHELNK 387 C+ I+ +L +++ F Q L+ ++++ + + +W G S Sbjct: 758 CQDILSQLGALKSIKIENSG-FVRKQDLEKILQEKLC-NQIQR--SNWRAGAS------- 806
Query: 388 VSGYAVVKLLMGLRLACPRDYNQEDSDIFIPATLSSARGRIRPSKYLKLDESCATYSFIE 567 + ++ +L+ L L +D ++ + +PA L ++ I+ + + + Sbjct: 807 LQSGDIINMLLKLELCYEQDPGNPNTLLLVPAMLEESKEGIQ-----RWQLTMPECRYAG 861
Query: 568 RRWSVADSNCTFLTPGIFPLVQV 636 R D++ FLT FP +QV Sbjct: 862 RHMECEDTH-MFLTNDFFPRLQV 883
>tr|B8AJX0|B8AJX0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13527 PE=4 SV=1 Length = 1156
Score = 36.6 bits (83), Expect = 1.4 Identities = 20/68 (29%), Positives = 40/68 (58%) Frame = +1
Query: 28 LCYR*IPPLITKERFHNLCQKHLGIESKEMCEVVALSLSSTGDLIYFPSLELVVIDTQWF 207 +C IP L + R H+ +K ++++ VA SL G++I+F L +++++ +WF Sbjct: 750 ICQLSIPVLRLRSR-HDNAEK---LDTRR--HAVAKSLHDLGEIIFFEELGVLIMNCEWF 803
Query: 208 CKKIMGEL 231 C+ I+ +L Sbjct: 804 CQDILSQL 811
>tr|Q4KJK9|Q4KJK9_PSEF5 Polyhydroxyalkanoate granule-associated protein GA2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0430 PE=4 SV=1 Length = 290
Score = 35.4 bits (80), Expect = 3.0 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2
Query: 466 QSPLGCSPLGKPAAGPLEVSPRHSPKPCSAHGFLMAP*PMKNPTC*PAFSSFPSQN 299 + P+ P KPAA P + +P P S+ AP P PT PA ++ SQ+ Sbjct: 235 KKPVAAKPAAKPAAKPAVAAKPAAPAPASSANSAAAPSPAATPTAAPAPATPSSQS 290
>tr|Q70WQ8|Q70WQ8_THETE Phosphoenolpyruvate synthetase OS=Thermoproteus tenax GN=pps PE=4 SV=1 Length = 810
Score = 35.0 bits (79), Expect = 3.9 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +2
Query: 209 VKKLWGSLYTLIWIFWTQSKCFSHSNCYRAVLRRK*AEGRSASGIF 346 VK++W SLYT I++ + SH N AV+ +K RSA +F Sbjct: 151 VKRVWASLYTARAIYYREQMGISHDNVSIAVVVQKLVNARSAGVMF 196
>tr|A5IXV9|A5IXV9_MYCAP Putative uncharacterized protein OS=Mycoplasma agalactiae (strain PG2) GN=MAG1700 PE=4 SV=1 Length = 622
Score = 34.7 bits (78), Expect = 5.1 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%) Frame = -3
Query: 192 DYHKLKGRKINQISSTTERE--RNHLTHLFRFN----AEVLLAKVVKPFFGNQRRNLSVA 31 DY+K+K N I ST + E RN +T+LF FN A L+ +V G + LS+A Sbjct: 386 DYYKIK----NYIESTKDSEEFRNKMTYLFNFNGTSKAAPLITGLVSRLQGELNKELSIA 441
Query: 30 EKFLL 16 + LL Sbjct: 442 KVKLL 446
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