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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956595
Clone id TST39A01NGRL0026_C11
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_C11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTTGAGGACCGGTTTCAATAAGGAGGGAGGGCTCTTTACTCGGCCGGCCCATCGCCATTG
CTCATACACCGTCACACAGAGCTACCAGTCAGGTGTGCAAGGTGTACCCTAGTTGGTTGC
CATGTCATCGGATAGCTCATCTGGCGTTGAATATGTGAAGGATGCCATAGGCGAGAAGTT
TCAGGACTTGCCAGCATCTACCTACTCTGAGGCGGGGGAGGAGTCTTCATCAGCTGTTAA
AGCACGCCTATTCAATCGGCAGAGATCTCTGCATCAGATTCTTGGGGGTGGAAAGGCTGC
TGATACATTTTTATGGAAGGATAAGTTCGTGTCTGCGGGGATACTAGCTGGTGCTACTGT
GGTTTATCTCATTCTTGAACACTCAGGATACACACTTCTGACAATCCTCTCAAATCTATT
CCTGGTCACTTTGGTCGTGCTGTTTGTCTGGTCAAATGCCGCGGTGTTTTTGAACAGGTC
TCCGCCTCCTTTGCCCAACCTTTATGTTTCCGAAGAAGTAGCAAACAGTCTTGCTCTTGC
CTTGCGGGCGGAGATAAACAAAGTGTTGGCAATTTATTAAAGACATAGCTTTAGGGAAGG
ATTTCAAGC
■■Homology search results ■■ -
sp_hit_id P33495
Definition sp|P33495|VGLG_TRTV Major surface glycoprotein G OS=Turkey rhinotracheitis virus
Align length 33
Score (bit) 30.4
E-value 7.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956595|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_C11, 5'
         (609 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33495|VGLG_TRTV Major surface glycoprotein G OS=Turkey rhino...    30   7.4  

>sp|P33495|VGLG_TRTV Major surface glycoprotein G OS=Turkey
           rhinotracheitis virus GN=G PE=2 SV=1
          Length = 391

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 604 KSFPKAMSLINCQHFVYLRPQGKSKTVCYFFGN 506
           +S P   + INC+HF    PQGK K +CY  G+
Sbjct: 307 QSLPTTQNSINCEHF---DPQGKEK-ICYRVGS 335
tr_hit_id Q4VDB8
Definition tr|Q4VDB8|Q4VDB8_9BRYO M-160-3_1 (Fragment) OS=Polytrichum juniperinum
Align length 151
Score (bit) 123.0
E-value 2.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956595|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_C11, 5'
         (609 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4VDB8|Q4VDB8_9BRYO M-160-3_1 (Fragment) OS=Polytrichum junip...   123   2e-27
tr|B3TLN1|B3TLN1_ELAGV 24 kDa seed maturation protein OS=Elaeis ...   121   4e-26
tr|Q2PYX0|Q2PYX0_SOLTU Putative 24 kDa seed maturation protein-l...   116   1e-24
tr|Q65X89|Q65X89_ORYSJ Os05g0526400 protein OS=Oryza sativa subs...   115   3e-24
tr|B4F9B1|B4F9B1_MAIZE Putative uncharacterized protein OS=Zea m...   114   6e-24
tr|A9TJT2|A9TJT2_PHYPA Predicted protein OS=Physcomitrella paten...   110   7e-24
tr|B6TGL5|B6TGL5_MAIZE Seed maturation protein OS=Zea mays PE=2 ...   112   2e-23
tr|B3TLV6|B3TLV6_ELAGV 24 kDa seed maturation protein OS=Elaeis ...   112   2e-23
tr|A2Y6P9|A2Y6P9_ORYSI Putative uncharacterized protein OS=Oryza...   112   2e-23
tr|A9TWT8|A9TWT8_PHYPA Predicted protein OS=Physcomitrella paten...   111   4e-23
tr|A9PAK3|A9PAK3_POPTR Putative uncharacterized protein OS=Popul...   110   6e-23
tr|A9TWT4|A9TWT4_PHYPA Predicted protein OS=Physcomitrella paten...   110   8e-23
tr|A9RZ19|A9RZ19_PHYPA Predicted protein OS=Physcomitrella paten...   109   1e-22
tr|B4F8J5|B4F8J5_MAIZE Putative uncharacterized protein OS=Zea m...   109   1e-22
tr|A7QNG2|A7QNG2_VITVI Chromosome chr2 scaffold_132, whole genom...   109   1e-22
tr|Q9AWY7|Q9AWY7_ORYSJ Putative uncharacterized protein P0492F05...   108   2e-22
tr|B6T616|B6T616_MAIZE Seed maturation protein OS=Zea mays PE=2 ...   108   2e-22
tr|A2WMA1|A2WMA1_ORYSI Putative uncharacterized protein OS=Oryza...   108   2e-22
tr|Q8S2K0|Q8S2K0_ORYSJ cDNA clone:J013002H02, full insert sequen...   108   3e-22
tr|B6TQ43|B6TQ43_MAIZE Seed maturation protein OS=Zea mays PE=2 ...   108   3e-22
tr|A7PNZ7|A7PNZ7_VITVI Chromosome chr8 scaffold_23, whole genome...   107   5e-22
tr|A2WUU6|A2WUU6_ORYSI Putative uncharacterized protein OS=Oryza...   107   5e-22
tr|B8LPJ1|B8LPJ1_PICSI Putative uncharacterized protein OS=Picea...   107   7e-22
tr|B6TAF1|B6TAF1_MAIZE Seed maturation protein OS=Zea mays PE=2 ...   107   7e-22
tr|B4F9U6|B4F9U6_MAIZE Putative uncharacterized protein OS=Zea m...   107   7e-22
tr|A9P8N5|A9P8N5_POPTR Putative uncharacterized protein OS=Popul...   107   7e-22
tr|A9RJX3|A9RJX3_PHYPA Predicted protein OS=Physcomitrella paten...   105   8e-22
tr|Q9SUT9|Q9SUT9_ARATH Putative uncharacterized protein AT4g1122...   106   9e-22
tr|A9PDM7|A9PDM7_POPTR Putative uncharacterized protein OS=Popul...   106   9e-22
tr|Q0DJ95|Q0DJ95_ORYSJ Os05g0312500 protein OS=Oryza sativa subs...   105   2e-21

>tr|Q4VDB8|Q4VDB8_9BRYO M-160-3_1 (Fragment) OS=Polytrichum
           juniperinum GN=m-160-3 PE=2 SV=1
          Length = 185

 Score =  123 bits (309), Expect(2) = 2e-27
 Identities = 60/151 (39%), Positives = 92/151 (60%)
 Frame = +2

Query: 122 MSSDSSSGVEYVKDAIGEKFQDLPASTYSEAGEESSSAVKARLFNRQRSLHQILGGGKAA 301
           MS  S +   YV DA  E    LPAS  +   ++ +  V  R   + +++HQ+LGGG+AA
Sbjct: 1   MSEQSDAAQSYV-DAAEETVNRLPASQPAPNSDQYTKPVSQRFLTKDKTVHQLLGGGRAA 59

Query: 302 DTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNAAVFLNRS 481
           D+ LW+DK++S G L G+TV++ +LE SGYT LT+L N           W+N A  L+R+
Sbjct: 60  DSALWRDKYLSIGTLVGSTVIWFLLEKSGYTFLTLLCNILMFGVDILFVWANVAALLHRN 119

Query: 482 PPPLPNLYVSEEVANSLALALRAEINKVLAI 574
            PP+P L +SEE   ++A ++R E+NK + +
Sbjct: 120 GPPVPELSLSEEFVTNIARSVRIELNKAMGV 150



 Score = 22.7 bits (47), Expect(2) = 2e-27
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 579 KDIALGKDFK 608
           +D+ALGKDFK
Sbjct: 152 RDVALGKDFK 161


>tr|B3TLN1|B3TLN1_ELAGV 24 kDa seed maturation protein OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 254

 Score =  121 bits (303), Expect = 4e-26
 Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
 Frame = +2

Query: 125 SSDSSSGVEYVKDAIGEKFQDLPASTYS----EAGEESSSAVKA---RLFNRQRSLHQIL 283
           S ++SS  E + + I EK     +S+ S    E  E S+S+VKA   RLF R+  +H++L
Sbjct: 5   SEEASSKPESLMEKIAEKLHGDDSSSSSDSDNEKSEPSASSVKAKIYRLFGREEPVHKVL 64

Query: 284 GGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNAA 463
           GGGK AD FLW++K +SAG+L GAT V+++ E   Y LLT++ +           WSNA+
Sbjct: 65  GGGKPADVFLWRNKKISAGVLGGATAVWVLFELLDYHLLTLVGHCLVLSLAILFLWSNAS 124

Query: 464 VFLNRSPPPLPNLYVSEEVANSLALALRAEINKVLAI 574
            F+N+ PP +P + + E+VA ++AL+LR EIN+  A+
Sbjct: 125 TFINKIPPHIPEVSIPEDVAINVALSLRYEINRAFAV 161


>tr|Q2PYX0|Q2PYX0_SOLTU Putative 24 kDa seed maturation protein-like
           protein OS=Solanum tuberosum PE=2 SV=1
          Length = 255

 Score =  116 bits (290), Expect = 1e-24
 Identities = 63/158 (39%), Positives = 97/158 (61%), Gaps = 7/158 (4%)
 Frame = +2

Query: 125 SSDSSSGVEYVKDAIGEKFQDLPASTY-SEAGEESSSAVKA------RLFNRQRSLHQIL 283
           + +  S VE V + I +K  D  +S+  SE  +E  S+V A      RLF R+R +H++L
Sbjct: 5   AGEHESVVESVMEKINDKLHDHDSSSSDSEDDKEKISSVDAVKAKIYRLFGRERPVHKVL 64

Query: 284 GGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNAA 463
           GGGK AD FLW+DK ++AG+L  AT ++++ E   Y LLT++ +           WSNA+
Sbjct: 65  GGGKPADIFLWRDKKITAGVLGFATSLWVLFELLQYHLLTLVCHILILALAVLFLWSNAS 124

Query: 464 VFLNRSPPPLPNLYVSEEVANSLALALRAEINKVLAIY 577
            F+N+SPP +P++ + E++   +A ALR EINK L I+
Sbjct: 125 TFINKSPPQIPDVILPEDIVLGVAAALRIEINKALEIF 162


>tr|Q65X89|Q65X89_ORYSJ Os05g0526400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1593_C11.13 PE=2 SV=1
          Length = 251

 Score =  115 bits (287), Expect = 3e-24
 Identities = 62/157 (39%), Positives = 97/157 (61%), Gaps = 5/157 (3%)
 Frame = +2

Query: 116 VAMSSDSSSGVEYVKDAIGEKFQDL--PASTYSEAGEESSSAVKA---RLFNRQRSLHQI 280
           +A   +  S VE V D I +K       +S+ S++  E ++ +KA   RLF R++ +H +
Sbjct: 1   MAEHKEEESLVESVMDKISDKLHGRGGSSSSSSDSDGERTADLKAKIYRLFGREKPVHSV 60

Query: 281 LGGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNA 460
           LGGGK AD FLW++K +S G+LAGAT ++L+ E   Y LLT+L +           WSNA
Sbjct: 61  LGGGKPADLFLWRNKKISVGVLAGATAIWLLFEVMDYHLLTLLCHCIILTLAMLFLWSNA 120

Query: 461 AVFLNRSPPPLPNLYVSEEVANSLALALRAEINKVLA 571
           + F+N+SPP +P + + E++A ++A +LR EIN+  A
Sbjct: 121 STFINKSPPNIPEVKIPEDLAVNVARSLRFEINRGFA 157


>tr|B4F9B1|B4F9B1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 253

 Score =  114 bits (284), Expect = 6e-24
 Identities = 62/151 (41%), Positives = 93/151 (61%), Gaps = 12/151 (7%)
 Frame = +2

Query: 155 VKDAIGEKFQDLPASTYSEAGEE------SSSAVKA------RLFNRQRSLHQILGGGKA 298
           V D I EKF    +S+ S++ +E      S+SA +A      RLF R+R +H +LGGGK 
Sbjct: 10  VMDKISEKFHGGDSSSSSDSDDEKKKGSSSASATEAMKAKIYRLFGRERPVHSVLGGGKP 69

Query: 299 ADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNAAVFLNR 478
           AD  LW++K +S G+LAGAT ++L+ E   Y LLT++ +           WSNA+ F+N+
Sbjct: 70  ADLVLWRNKKISGGVLAGATAIWLLFEVMEYHLLTLVCHCLIVSLAILFLWSNASSFINK 129

Query: 479 SPPPLPNLYVSEEVANSLALALRAEINKVLA 571
           SPP +P + + E+V+ ++AL LR EIN+  A
Sbjct: 130 SPPNIPEVKIPEDVSVNVALTLRYEINRGFA 160


>tr|A9TJT2|A9TJT2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_146650 PE=4 SV=1
          Length = 220

 Score =  110 bits (276), Expect(2) = 7e-24
 Identities = 53/110 (48%), Positives = 73/110 (66%)
 Frame = +2

Query: 245 RLFNRQRSLHQILGGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXX 424
           R   + +++HQILGGG+AAD FLWKD+ +SA IL G+T+V+ +LE SGYT LT+LSN   
Sbjct: 17  RFLTKDKNVHQILGGGRAADAFLWKDRNLSAIILGGSTLVWFLLEKSGYTFLTLLSNILM 76

Query: 425 XXXXXXXXWSNAAVFLNRSPPPLPNLYVSEEVANSLALALRAEINKVLAI 574
                   W+N A  LNR+ PP+P L +SE+     A  +R E+NK L+I
Sbjct: 77  FSVIILFVWANVAALLNRAGPPVPELSLSEDFVLRTASTVRVELNKALSI 126



 Score = 23.5 bits (49), Expect(2) = 7e-24
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 561 KCWQFIKDIALGKDFK 608
           K     +D+ALGKDFK
Sbjct: 122 KALSIARDVALGKDFK 137


>tr|B6TGL5|B6TGL5_MAIZE Seed maturation protein OS=Zea mays PE=2
           SV=1
          Length = 257

 Score =  112 bits (280), Expect = 2e-23
 Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 12/153 (7%)
 Frame = +2

Query: 149 EYVKDAIGEKFQDLPASTYSEAGEE---------SSSAVKA---RLFNRQRSLHQILGGG 292
           E V D I EKF    +S+ S   ++         ++ A+KA   RLF R+R +H +LGGG
Sbjct: 11  ESVMDKITEKFHGGDSSSSSSDSDDEKKGSSLASAAEAMKAKIYRLFGRERPVHSVLGGG 70

Query: 293 KAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNAAVFL 472
           K AD  LW+++ +S G+LAGAT ++L+ E   Y LLT++ +           WSNA+ F+
Sbjct: 71  KPADLILWRNRKISGGVLAGATAIWLLFEVMEYHLLTLVCHCLILSLAILFLWSNASTFI 130

Query: 473 NRSPPPLPNLYVSEEVANSLALALRAEINKVLA 571
           N+SPP +P + + E+VA ++AL+LR EIN+  A
Sbjct: 131 NKSPPNIPEVKIPEDVAVNVALSLRYEINRGFA 163


>tr|B3TLV6|B3TLV6_ELAGV 24 kDa seed maturation protein OS=Elaeis
           guineensis var. tenera PE=2 SV=1
          Length = 252

 Score =  112 bits (280), Expect = 2e-23
 Identities = 62/155 (40%), Positives = 98/155 (63%), Gaps = 6/155 (3%)
 Frame = +2

Query: 116 VAMSSDSSSGVEYVKDAIGEKFQDLPASTY---SEAGEESSSAVKA---RLFNRQRSLHQ 277
           +A + + S G E V + I EKF D  +S+    +E  + SSS VK+   RLF R++ +H 
Sbjct: 1   MAENKEESVG-ESVMEKIMEKFHDDDSSSSDSDNEKSKPSSSPVKSQIYRLFGREKPVHT 59

Query: 278 ILGGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSN 457
           +LGGG  AD FLW++K +SAG+L GAT ++++ E   Y LL ++ +           WSN
Sbjct: 60  VLGGGTPADVFLWRNKKISAGVLGGATAIWVLFELMEYHLLALVCHCLILSLAILFLWSN 119

Query: 458 AAVFLNRSPPPLPNLYVSEEVANSLALALRAEINK 562
           A+ F+++SPP +P + + E+VA ++AL+LR EIN+
Sbjct: 120 ASTFIHKSPPRIPEVSIPEDVAVNVALSLRYEINR 154


>tr|A2Y6P9|A2Y6P9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20691 PE=4 SV=1
          Length = 251

 Score =  112 bits (280), Expect = 2e-23
 Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 5/157 (3%)
 Frame = +2

Query: 116 VAMSSDSSSGVEYVKDAIGEKFQDL--PASTYSEAGEESSSAVKA---RLFNRQRSLHQI 280
           +A   +  S VE V D I +K       +S+ S++  E ++ +KA   RLF R++ +H +
Sbjct: 1   MAEHKEEESLVESVMDKISDKLHGRGGSSSSSSDSDGERTADLKAKIYRLFGREKPVHSV 60

Query: 281 LGGGKAADTFLWKDKFVSAGILAGATVVYLILEHSGYTLLTILSNXXXXXXXXXXXWSNA 460
           LGGGK AD FLW++K +S G+L GAT ++L+ E   Y LLT+L +           WSNA
Sbjct: 61  LGGGKPADLFLWRNKKISVGVLTGATAIWLLFEVMDYHLLTLLCHCIILTLAMLFLWSNA 120

Query: 461 AVFLNRSPPPLPNLYVSEEVANSLALALRAEINKVLA 571
           + F+N+SPP +P + + E++A ++A ++R EIN+  A
Sbjct: 121 STFINKSPPNIPEVKIPEDLAVNVARSVRFEINRGFA 157


>tr|A9TWT8|A9TWT8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_151993 PE=4 SV=1
          Length = 218

 Score =  111 bits (277), Expect = 4e-23
 Identities = 54/129 (41%), Positives = 84/129 (65%)
 Frame = +2

Query: 188 LPASTYSEAGEESSSAVKARLFNRQRSLHQILGGGKAADTFLWKDKFVSAGILAGATVVY 367
           +PAS  + A E    A ++R   + +++HQ+LGGG+AAD+ LW+DK++SAG L G+T+++
Sbjct: 1   MPASQTAPASEY---APRSRFLMKDKNVHQLLGGGRAADSALWRDKYLSAGTLGGSTLIW 57

Query: 368 LILEHSGYTLLTILSNXXXXXXXXXXXWSNAAVFLNRSPPPLPNLYVSEEVANSLALALR 547
            +LE SGYTL+T+L N           WSN A  L+R  PP+P L + E++  S A  +R
Sbjct: 58  FLLEKSGYTLVTLLCNILLFVIVILFLWSNVASLLHRPGPPVPELTLPEDLVLSTANVVR 117

Query: 548 AEINKVLAI 574
            E+NK L++
Sbjct: 118 IEVNKALSV 126