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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956522
Clone id TST39A01NGRL0025_P10
Library
Length 604
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_P10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGACATTGACGAGGAGAAACTTCGAGAAGTGGTGTCGGAGGAAAAAATAACATCAGTGCC
AACATTTAGGTACTTTCGTGGTGGCAAATCGGTTGGAGAATTGATTGGCGCTGACGCACG
TTTGTTAAAGGATAAAGTTGCAGCACTCTGTGGGTACTAGCTGTCTTGGGCTTCGGAATG
AAATCGATAGGGAGATTCTGCACCTCGTAGAGAGTCTTTGCTAAAAGTCACGCAATTTCG
TTAGCTGTGGCAAGTTGTATCCAATTTTTGCAGCTTTTTTGATACAAAGAAATTGAGGCC
ATTGTGCCGTGTACAGGTTTTTGGACAGTCTAGACATGAAACAAGATACTTGTGAGGCGA
TGCAGTTTGATATGATCAACTTTCTGCTCTTTGAGCTGAAATGCGAGATGGGGTTTAGAA
GCAAGCAGAAAAAGTGTCATAGGACTAGGCTATTTTGTCCATTTGGACTGATGAGGATGA
TGAAACCATAGTTTTTTCCATACACTTCCAGGCGGAAAATGCGTACAGGTATGGAGTATG
GTCGGAGTATATTCCTACCCTGAAATATACGACCCTAATTTTATTTAAAAAAAAAAAAAA
AAAA
■■Homology search results ■■ -
sp_hit_id Q7KQL8
Definition sp|Q7KQL8|THIO_PLAF7 Thioredoxin OS=Plasmodium falciparum (isolate 3D7)
Align length 45
Score (bit) 42.4
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956522|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_P10, 5'
         (586 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7KQL8|THIO_PLAF7 Thioredoxin OS=Plasmodium falciparum (isola...    42   0.002
sp|Q5XJ54|GLRX3_DANRE Glutaredoxin 3 OS=Danio rerio GN=glrx3 PE=...    42   0.003
sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana GN=SB09...    41   0.004
sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae G...    38   0.033
sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae G...    38   0.033
sp|P82460|THIO_PIG Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3          38   0.043
sp|P29451|THIO_MACMU Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2    38   0.043
sp|P10599|THIO_HUMAN Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3      38   0.043
sp|P29429|THIO_EMENI Thioredoxin OS=Emericella nidulans GN=TRX1 ...    38   0.043
sp|Q9BDJ3|THIO_CALJA Thioredoxin OS=Callithrix jacchus GN=TXN PE...    37   0.056
sp|P08628|THIO_RABIT Thioredoxin OS=Oryctolagus cuniculus GN=TXN...    37   0.095
sp|O97680|THIO_BOVIN Thioredoxin OS=Bos taurus GN=TXN PE=3 SV=3        37   0.095
sp|Q8LDI5|TRXL4_ARATH Thioredoxin-like 4 OS=Arabidopsis thaliana...    36   0.12 
sp|Q9C9Y6|TRXH9_ARATH Thioredoxin H-type 9 OS=Arabidopsis thalia...    36   0.16 
sp|Q9UW02|THIO_COPCM Thioredoxin OS=Coprinus comatus PE=1 SV=1         36   0.16 
sp|Q86VQ3|TXND2_HUMAN Thioredoxin domain-containing protein 2 OS...    35   0.21 
sp|Q38879|TRXH2_ARATH Thioredoxin H-type 2 OS=Arabidopsis thalia...    35   0.21 
sp|Q9ZPH2|GRS17_ARATH Monothiol glutaredoxin-S17 OS=Arabidopsis ...    35   0.21 
sp|P34723|THIO_PENCH Thioredoxin OS=Penicillium chrysogenum GN=T...    35   0.28 
sp|O96952|THIO_GEOCY Thioredoxin OS=Geodia cydonium GN=THIO PE=3...    35   0.28 
sp|P08629|THIO_CHICK Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2     35   0.28 
sp|Q0IWL9|GRS11_ORYSJ Monothiol glutaredoxin-S11 OS=Oryza sativa...    35   0.28 
sp|Q5XHX6|TXND2_RAT Thioredoxin domain-containing protein 2 OS=R...    34   0.47 
sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1    34   0.47 
sp|Q39239|TRXH4_ARATH Thioredoxin H-type 4 OS=Arabidopsis thalia...    34   0.47 
sp|P10639|THIO_MOUSE Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3      34   0.47 
sp|P60226|THIO1_DROYA Thioredoxin-1 OS=Drosophila yakuba GN=dhd ...    34   0.47 
sp|P47938|THIO1_DROME Thioredoxin-1 OS=Drosophila melanogaster G...    34   0.47 
sp|P29448|TRXH1_ARATH Thioredoxin H-type 1 OS=Arabidopsis thalia...    34   0.62 
sp|O14463|TRX1_SCHPO Thioredoxin-1 OS=Schizosaccharomyces pombe ...    34   0.62 

>sp|Q7KQL8|THIO_PLAF7 Thioredoxin OS=Plasmodium falciparum (isolate
           3D7) GN=PF14_0545 PE=1 SV=1
          Length = 104

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/45 (40%), Positives = 30/45 (66%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKV 139
           +D +++ EV  +E ITS+PTF+ ++ G SV  L+GA+   LK  +
Sbjct: 55  VDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLI 99


>sp|Q5XJ54|GLRX3_DANRE Glutaredoxin 3 OS=Danio rerio GN=glrx3 PE=2
           SV=1
          Length = 326

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           ++ E + EV  + +ITSVPTF +F+GG+ +  L GA A  L +KV  L
Sbjct: 59  LEAEAVPEVSEKYEITSVPTFLFFKGGEKIDRLDGAHAPELTNKVQRL 106


>sp|O65049|TRXH_PICMA Thioredoxin H-type OS=Picea mariana GN=SB09
           PE=2 SV=1
          Length = 125

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 19/48 (39%), Positives = 33/48 (68%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           +D ++LR+V  E  + ++PTF + + GK+V +++GA    L+ KVAAL
Sbjct: 63  VDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAAL 110


>sp|P22803|TRX2_YEAST Thioredoxin-2 OS=Saccharomyces cerevisiae
           GN=TRX2 PE=1 SV=3
          Length = 104

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 13/47 (27%), Positives = 32/47 (68%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAA 145
           +D +++ +V  + +++S+PT  +++GGK V  ++GA+   +K  +A+
Sbjct: 56  LDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIAS 102


>sp|P22217|TRX1_YEAST Thioredoxin-1 OS=Saccharomyces cerevisiae
           GN=TRX1 PE=1 SV=3
          Length = 103

 Score = 38.1 bits (87), Expect = 0.033
 Identities = 14/47 (29%), Positives = 31/47 (65%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAA 145
           +D ++L +V  + +++++PT   F+ GK V +++GA+   +K  +AA
Sbjct: 55  LDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAA 101


>sp|P82460|THIO_PIG Thioredoxin OS=Sus scrofa GN=TXN PE=1 SV=3
          Length = 105

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 16/49 (32%), Positives = 31/49 (63%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           ++D +  ++V SE ++  +PTF++F+ G+ VGE  GA+   L+  +  L
Sbjct: 56  EVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104


>sp|P29451|THIO_MACMU Thioredoxin OS=Macaca mulatta GN=TXN PE=3 SV=2
          Length = 105

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 16/49 (32%), Positives = 31/49 (63%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           ++D +  ++V SE ++  +PTF++F+ G+ VGE  GA+   L+  +  L
Sbjct: 56  EVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104


>sp|P10599|THIO_HUMAN Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3
          Length = 105

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 16/49 (32%), Positives = 31/49 (63%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           ++D +  ++V SE ++  +PTF++F+ G+ VGE  GA+   L+  +  L
Sbjct: 56  EVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL 104


>sp|P29429|THIO_EMENI Thioredoxin OS=Emericella nidulans GN=TRX1
           PE=1 SV=2
          Length = 110

 Score = 37.7 bits (86), Expect = 0.043
 Identities = 18/48 (37%), Positives = 31/48 (64%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           ID ++L EV +E  I ++PTF  F+ G+ V +++GA+   L+  + AL
Sbjct: 61  IDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGIKAL 108


>sp|Q9BDJ3|THIO_CALJA Thioredoxin OS=Callithrix jacchus GN=TXN PE=3
           SV=3
          Length = 105

 Score = 37.4 bits (85), Expect = 0.056
 Identities = 15/43 (34%), Positives = 29/43 (67%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLK 130
           ++D +  ++V SE ++  +PTF++F+ G+ VGE  GA+   L+
Sbjct: 56  EVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98
tr_hit_id Q8GW51
Definition tr|Q8GW51|Q8GW51_ARATH Putative thioredoxin OS=Arabidopsis thaliana
Align length 49
Score (bit) 46.6
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956522|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0025_P10, 5'
         (586 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8GW51|Q8GW51_ARATH Putative thioredoxin OS=Arabidopsis thali...    47   0.001
tr|Q257C6|Q257C6_PEA Putative thioredoxin OS=Pisum sativum GN=tr...    47   0.001
tr|O64764|O64764_ARATH Putative thioredoxin (At2g35010) OS=Arabi...    47   0.001
tr|A3GI91|A3GI91_PICST Thioredoxin OS=Pichia stipitis GN=TRX1 PE...    44   0.005
tr|Q0UDG8|Q0UDG8_PHANO Putative uncharacterized protein OS=Phaeo...    44   0.007
tr|A9P227|A9P227_PICSI Putative uncharacterized protein OS=Picea...    44   0.009
tr|B4M6U2|B4M6U2_DROVI GJ16851 OS=Drosophila virilis GN=GJ16851 ...    44   0.009
tr|B2W831|B2W831_PYRTR Thioredoxin OS=Pyrenophora tritici-repent...    44   0.009
tr|A1DE58|A1DE58_NEOFI Thioredoxin TrxA OS=Neosartorya fischeri ...    43   0.015
tr|Q9LVI2|Q9LVI2_ARATH Thioredoxin-like protein OS=Arabidopsis t...    42   0.020
tr|Q8VWG7|Q8VWG7_ARATH Tetratricoredoxin (Putative HSC70-interac...    42   0.020
tr|Q8LG82|Q8LG82_ARATH Tetratricoredoxin OS=Arabidopsis thaliana...    42   0.020
tr|Q7XJ63|Q7XJ63_ARATH At3g17880 OS=Arabidopsis thaliana PE=2 SV=1     42   0.020
tr|Q9NIR2|Q9NIR2_PLAFA Thioredoxin 1 OS=Plasmodium falciparum GN...    42   0.020
tr|Q9NFK9|Q9NFK9_PLAFA Thioredoxin OS=Plasmodium falciparum GN=t...    42   0.020
tr|A5DPF9|A5DPF9_PICGU Putative uncharacterized protein OS=Pichi...    42   0.026
tr|A9VD12|A9VD12_MONBE Predicted protein OS=Monosiga brevicollis...    42   0.033
tr|Q8VZH4|Q8VZH4_TOBAC Tetratricoredoxin OS=Nicotiana tabacum PE...    41   0.044
tr|A9NWD4|A9NWD4_PICSI Putative uncharacterized protein OS=Picea...    41   0.044
tr|A9NL11|A9NL11_PICSI Putative uncharacterized protein OS=Picea...    41   0.044
tr|A9NJU5|A9NJU5_PICSI Putative uncharacterized protein OS=Picea...    41   0.044
tr|Q75CQ0|Q75CQ0_ASHGO ACL131Wp OS=Ashbya gossypii GN=ACL131W PE...    41   0.044
tr|Q84XS0|Q84XS0_CHLRE Thioredoxin o OS=Chlamydomonas reinhardti...    41   0.057
tr|Q655X0|Q655X0_ORYSJ Os06g0665900 protein OS=Oryza sativa subs...    41   0.057
tr|A0JNM2|A0JNM2_BOVIN Thioredoxin domain containing 8 (Spermato...    41   0.057
tr|Q1JT82|Q1JT82_TOXGO Thioredoxin, putative OS=Toxoplasma gondi...    41   0.057
tr|B6KQR5|B6KQR5_TOXGO Thioredoxin, putative OS=Toxoplasma gondi...    41   0.057
tr|A5K3I4|A5K3I4_PLAVI Thioredoxin, putative OS=Plasmodium vivax...    41   0.057
tr|Q5DHI0|Q5DHI0_SCHJA SJCHGC02159 protein OS=Schistosoma japoni...    40   0.074
tr|Q4N2X5|Q4N2X5_THEPA Thioredoxin, putative OS=Theileria parva ...    40   0.074

>tr|Q8GW51|Q8GW51_ARATH Putative thioredoxin OS=Arabidopsis thaliana
           GN=At2g35010 PE=4 SV=1
          Length = 96

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           DIDE  +   +S+  IT+VPT  +F+GG   GE++GAD   LK+ +  L
Sbjct: 46  DIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGADVTKLKNLMEQL 94


>tr|Q257C6|Q257C6_PEA Putative thioredoxin OS=Pisum sativum GN=trx
           PE=2 SV=1
          Length = 181

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGAD-ARL 124
           DID+E +++ +S  +ITSVPT  +F+ GK   ELIGAD ARL
Sbjct: 129 DIDQEAIQDTLSRLQITSVPTLHFFQNGKKTDELIGADVARL 170


>tr|O64764|O64764_ARATH Putative thioredoxin (At2g35010)
           OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1
          Length = 194

 Score = 46.6 bits (109), Expect = 0.001
 Identities = 21/49 (42%), Positives = 31/49 (63%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           DIDE  +   +S+  IT+VPT  +F+GG   GE++GAD   LK+ +  L
Sbjct: 144 DIDEGGISNTISKLNITAVPTLHFFKGGSKKGEVVGADVTKLKNLMEQL 192


>tr|A3GI91|A3GI91_PICST Thioredoxin OS=Pichia stipitis GN=TRX1 PE=4
           SV=1
          Length = 103

 Score = 44.3 bits (103), Expect = 0.005
 Identities = 19/47 (40%), Positives = 33/47 (70%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAA 145
           +D ++L E+  E +++S+PT  +F+GGK V ++IGA+   LK  +AA
Sbjct: 55  VDVDELGEIAQEYEVSSMPTIIFFKGGKIVTKVIGANPAALKQAIAA 101


>tr|Q0UDG8|Q0UDG8_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_10196 PE=4 SV=1
          Length = 169

 Score = 43.9 bits (102), Expect = 0.007
 Identities = 22/51 (43%), Positives = 34/51 (66%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAALCG 154
           ++DE+  RE+ +   ++++PTF  F+GGK VGE+ GAD R LK  V  + G
Sbjct: 58  NVDEQ--RELAATHGVSAMPTFVLFKGGKRVGEVRGADVRELKRVVEGVVG 106


>tr|A9P227|A9P227_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 183

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 21/49 (42%), Positives = 29/49 (59%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAAL 148
           DID + L   +    +TSVPTF +++ G  V +LIGAD   LK+ V  L
Sbjct: 133 DIDLDTLSNSLQTSGVTSVPTFHFYKNGAKVADLIGADPHRLKEIVGNL 181


>tr|B4M6U2|B4M6U2_DROVI GJ16851 OS=Drosophila virilis GN=GJ16851
           PE=4 SV=1
          Length = 106

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 18/49 (36%), Positives = 33/49 (67%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAALC 151
           ++ +K  E+V + K+ S+PTF + +G +S+G++IGAD   L   +A +C
Sbjct: 57  VNVDKFDELVEKYKVRSMPTFVFLKGNRSLGKIIGADEHKLTRMMAKVC 105


>tr|B2W831|B2W831_PYRTR Thioredoxin OS=Pyrenophora tritici-repentis
           (strain Pt-1C-BFP) GN=PTRG_05969 PE=4 SV=1
          Length = 164

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 20/50 (40%), Positives = 31/50 (62%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAALCG 154
           I+ ++ RE+  +  +T++PTF  F+ GK V E+ GAD R LK+ V    G
Sbjct: 58  INVDEQREIAGQYGVTAMPTFMLFKEGKKVDEVRGADVRALKEMVERAAG 107


>tr|A1DE58|A1DE58_NEOFI Thioredoxin TrxA OS=Neosartorya fischeri
           (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_075950
           PE=4 SV=1
          Length = 110

 Score = 42.7 bits (99), Expect = 0.015
 Identities = 18/48 (37%), Positives = 33/48 (68%)
 Frame = +2

Query: 2   DIDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVAA 145
           +ID ++L EV +E  + ++PTF +F+GG+ V E++GA+   L+  + A
Sbjct: 60  EIDVDELSEVAAELGVRAMPTFMFFKGGEKVNEVVGANPPALEAAIKA 107


>tr|Q9LVI2|Q9LVI2_ARATH Thioredoxin-like protein OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 175

 Score = 42.4 bits (98), Expect = 0.020
 Identities = 19/46 (41%), Positives = 30/46 (65%)
 Frame = +2

Query: 5   IDEEKLREVVSEEKITSVPTFRYFRGGKSVGELIGADARLLKDKVA 142
           +D +K  +V +   I+SVPTF + R GK V +++GAD   L+ K+A
Sbjct: 83  VDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQKIA 128