DK956412 |
Clone id |
TST39A01NGRL0025_K19 |
Library |
TST39 |
Length |
586 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_K19. 5' end sequence. |
Accession |
DK956412 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTCTCTTCTTGATGGTGTGGAGAAGGGGGGGACTTAGTCCCCTTGGGAGGGAGCGCGGCG TTCGGCGTTTTTTGCCATGATAAAAATAATACGTTGAGTCGCAAAGGACAGATTTTGGCT CTTGAGTTAAGATCCACATTTTCTATTTAGGCCAATTTGGAGACATCTATCAGGAGAATT TTTTTATCGATATTTTGAAGTATGACATCAAAATTGTCAAGGAGCTTCCTAATGAATTGC AATCCCTTGACCTTGATGCGATAGGAAGCATTGTATCGGATATGGATGTGCCAAAAGAGG CTAAACCGAGCTTTTTCATTAATTACATACTGCCAATACTTCTACGCAATCGTGTTGTGC ACTTCTTTGGCTTTGGAAACCGATTATCTTTTGATCCAATACCCTTTGACTTGCAGAGAC TTAGATGCAAATGCAACTTTTATGCATTAAAGTTTATTCCAAAGATTCAGAGAGCGGCCG GACTGCTGGTCAGAAGGATGCGTGAGCAAGACAAGAGATGGGGCCCTGAGATGACACAAG GTGAGGGTAGTAGCACCCTGGCTGTTGCTCAGTCAAAGGGGTTGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8W486 |
Definition |
sp|Q8W486|Y1491_ARATH DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana |
Align length |
118 |
Score (bit) |
60.8 |
E-value |
4.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SQS1 |
Definition |
tr|A9SQS1|A9SQS1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
133 |
Score (bit) |
184.0 |
E-value |
2.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956412|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_K19, 5' (571 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SQS1|A9SQS1_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 2e-45 tr|A9SJD4|A9SJD4_PHYPA Predicted protein OS=Physcomitrella paten... 180 4e-44 tr|Q67XL6|Q67XL6_ARATH MRNA, complete cds, clone: RAFL25-35-C17 ... 179 7e-44 tr|O48796|O48796_ARATH F24O1.5 OS=Arabidopsis thaliana PE=4 SV=1 179 7e-44 tr|A7QDI3|A7QDI3_VITVI Chromosome chr10 scaffold_81, whole genom... 178 2e-43 tr|Q67VE2|Q67VE2_ORYSJ Putative auxin-independent growth promote... 176 8e-43 tr|B8B4G3|B8B4G3_ORYSI Putative uncharacterized protein OS=Oryza... 176 8e-43 tr|A3BA44|A3BA44_ORYSJ Putative uncharacterized protein OS=Oryza... 176 8e-43 tr|O65380|O65380_ARATH F12F1.14 protein OS=Arabidopsis thaliana ... 175 1e-42 tr|A7R0N0|A7R0N0_VITVI Chromosome chr10 scaffold_312, whole geno... 174 2e-42 tr|Q5Z5W7|Q5Z5W7_ORYSJ Os06g0545900 protein OS=Oryza sativa subs... 166 1e-39 tr|B8B3L3|B8B3L3_ORYSI Putative uncharacterized protein OS=Oryza... 166 1e-39 tr|A3BCJ5|A3BCJ5_ORYSJ Putative uncharacterized protein OS=Oryza... 166 1e-39 tr|B4FG68|B4FG68_MAIZE Putative uncharacterized protein OS=Zea m... 162 9e-39 tr|B2ZAU8|B2ZAU8_GOSAR Putative growth regulator OS=Gossypium ar... 162 1e-38 tr|Q6DXT1|Q6DXT1_GOSHI Putative growth regulator OS=Gossypium hi... 162 2e-38 tr|B6SV40|B6SV40_MAIZE Growth regulator OS=Zea mays PE=2 SV=1 160 4e-38 tr|Q6DXR7|Q6DXR7_GOSHI Putative growth regulator OS=Gossypium hi... 160 6e-38 tr|B2ZAT4|B2ZAT4_9ROSI Putative growth regulator OS=Gossypioides... 159 1e-37 tr|Q9LP49|Q9LP49_ARATH F28N24.11 protein OS=Arabidopsis thaliana... 142 1e-32 tr|Q5BPY9|Q5BPY9_ARATH Putative uncharacterized protein OS=Arabi... 142 1e-32 tr|B3H6X4|B3H6X4_ARATH Uncharacterized protein At1g29200.3 OS=Ar... 142 1e-32 tr|Q5BQ14|Q5BQ14_ARATH Putative uncharacterized protein (Express... 116 1e-24 tr|A9RI83|A9RI83_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|Q2PEZ0|Q2PEZ0_TRIPR Putative uncharacterized protein (Fragmen... 89 2e-16 tr|B6UFP0|B6UFP0_MAIZE Auxin-independent growth promoter-like pr... 88 4e-16 tr|Q9FKP3|Q9FKP3_ARATH Similarity to auxin-independent growth pr... 87 6e-16 tr|Q8RWD4|Q8RWD4_ARATH Putative uncharacterized protein At5g6547... 87 6e-16 tr|Q0WUZ5|Q0WUZ5_ARATH Putative uncharacterized protein At5g6547... 87 6e-16 tr|Q9SVE6|Q9SVE6_ARATH Putative growth regulator protein OS=Arab... 87 8e-16
>tr|A9SQS1|A9SQS1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_133634 PE=4 SV=1 Length = 494
Score = 184 bits (468), Expect = 2e-45 Identities = 79/133 (59%), Positives = 110/133 (82%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIY+EN+FID LK D++IVKELP EL++LDL+AI +++++ D+PKEAKPSF++N +L Sbjct: 117 QFGDIYEENYFIDYLKDDVRIVKELPPELKALDLEAIEAVMTEFDIPKEAKPSFYLNQVL 176
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMREQD 497 P+LLR RVV F GFGNRL FDP+PFD+QRLRC+CNF+AL+F+P++Q+ ++ RMR++ Sbjct: 177 PLLLRTRVVLFEGFGNRLGFDPVPFDIQRLRCRCNFHALRFVPELQKLGKVIAERMRDKH 236
Query: 498 KRWGPEMTQGEGS 536 RWGP G + Sbjct: 237 SRWGPSDDDGSAA 249
>tr|A9SJD4|A9SJD4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_57984 PE=4 SV=1 Length = 435
Score = 180 bits (457), Expect = 4e-44 Identities = 80/125 (64%), Positives = 107/125 (85%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIY E +F++ LK D++IVKELP ELQSLDL+AI ++V+++DVPKEAKPSF++ +IL Sbjct: 50 QFGDIYDEAYFMNHLKEDVRIVKELPLELQSLDLEAIEAVVTEIDVPKEAKPSFYLKHIL 109
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMREQD 497 P+L+ +VV F GFGNRL+FDP+PFD+QRLRC+CNF+ALKF+PK+ GL+V RMR++ Sbjct: 110 PLLMEKQVVLFEGFGNRLAFDPVPFDIQRLRCRCNFHALKFVPKLLELGGLIVERMRDKH 169
Query: 498 KRWGP 512 RWGP Sbjct: 170 PRWGP 174
>tr|Q67XL6|Q67XL6_ARATH MRNA, complete cds, clone: RAFL25-35-C17 OS=Arabidopsis thaliana PE=2 SV=1 Length = 652
Score = 179 bits (455), Expect = 7e-44 Identities = 83/125 (66%), Positives = 102/125 (81%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQ FI L DI+IVK+LP ELQSLDL+AIGS+V+D+DV KEAKP F++ +IL Sbjct: 270 QFGDIYQVEHFIKYLSPDIRIVKKLPKELQSLDLEAIGSVVTDIDVMKEAKPGFYMKHIL 329
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMREQD 497 P+LL+NRVVHF GFGNRL+FDPIPF+LQRLRC+CNF+AL F+PKIQ +LVRR+R+ Sbjct: 330 PLLLKNRVVHFLGFGNRLAFDPIPFELQRLRCRCNFHALNFVPKIQETGAILVRRLRDSG 389
Query: 498 KRWGP 512 P Sbjct: 390 SHLAP 394
>tr|O48796|O48796_ARATH F24O1.5 OS=Arabidopsis thaliana PE=4 SV=1 Length = 683
Score = 179 bits (455), Expect = 7e-44 Identities = 83/125 (66%), Positives = 102/125 (81%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQ FI L DI+IVK+LP ELQSLDL+AIGS+V+D+DV KEAKP F++ +IL Sbjct: 301 QFGDIYQVEHFIKYLSPDIRIVKKLPKELQSLDLEAIGSVVTDIDVMKEAKPGFYMKHIL 360
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMREQD 497 P+LL+NRVVHF GFGNRL+FDPIPF+LQRLRC+CNF+AL F+PKIQ +LVRR+R+ Sbjct: 361 PLLLKNRVVHFLGFGNRLAFDPIPFELQRLRCRCNFHALNFVPKIQETGAILVRRLRDSG 420
Query: 498 KRWGP 512 P Sbjct: 421 SHLAP 425
>tr|A7QDI3|A7QDI3_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035851001 PE=4 SV=1 Length = 629
Score = 178 bits (452), Expect = 2e-43 Identities = 80/120 (66%), Positives = 104/120 (86%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQE++FI+I+K +++IVKELP L+SLD++AIGS+++D D+PKEAKP ++ +L Sbjct: 246 QFGDIYQEDYFINIMKDELEIVKELPPHLESLDMEAIGSLITDADIPKEAKPIEYVQKVL 305
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMREQD 497 P+LLRN VVHF GFGNRL FDP+PF LQRLRCKCNF+ALKF+PKIQR LLV+R+R+ D Sbjct: 306 PLLLRNGVVHFLGFGNRLGFDPLPFKLQRLRCKCNFHALKFVPKIQRVGSLLVQRIRKYD 365
>tr|Q67VE2|Q67VE2_ORYSJ Putative auxin-independent growth promoter OS=Oryza sativa subsp. japonica GN=OSJNBa0052G07.27 PE=4 SV=1 Length = 585
Score = 176 bits (446), Expect = 8e-43 Identities = 84/116 (72%), Positives = 100/116 (86%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQE++FI+ LK DI+IVKELP ELQSLDL+AIGS+V+D DV KEAKPS ++ IL Sbjct: 210 QFGDIYQEDYFINYLKSDIRIVKELPVELQSLDLEAIGSLVNDTDVMKEAKPSLYVKKIL 269
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRM 485 PILL+NRVVH GFGNRLSFDPIPF+LQRLRC+CNF+AL+F+ KIQ LLV R+ Sbjct: 270 PILLKNRVVHLVGFGNRLSFDPIPFELQRLRCRCNFHALRFVHKIQETGALLVERL 325
>tr|B8B4G3|B8B4G3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22331 PE=4 SV=1 Length = 845
Score = 176 bits (446), Expect = 8e-43 Identities = 84/116 (72%), Positives = 100/116 (86%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQE++FI+ LK DI+IVKELP ELQSLDL+AIGS+V+D DV KEAKPS ++ IL Sbjct: 210 QFGDIYQEDYFINYLKSDIRIVKELPVELQSLDLEAIGSLVNDTDVMKEAKPSLYVKKIL 269
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRM 485 PILL+NRVVH GFGNRLSFDPIPF+LQRLRC+CNF+AL+F+ KIQ LLV R+ Sbjct: 270 PILLKNRVVHLVGFGNRLSFDPIPFELQRLRCRCNFHALRFVHKIQETGALLVERL 325
>tr|A3BA44|A3BA44_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019916 PE=4 SV=1 Length = 829
Score = 176 bits (446), Expect = 8e-43 Identities = 84/116 (72%), Positives = 100/116 (86%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQE++FI+ LK DI+IVKELP ELQSLDL+AIGS+V+D DV KEAKPS ++ IL Sbjct: 149 QFGDIYQEDYFINYLKSDIRIVKELPVELQSLDLEAIGSLVNDTDVMKEAKPSLYVKKIL 208
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRM 485 PILL+NRVVH GFGNRLSFDPIPF+LQRLRC+CNF+AL+F+ KIQ LLV R+ Sbjct: 209 PILLKNRVVHLVGFGNRLSFDPIPFELQRLRCRCNFHALRFVHKIQETGALLVERL 264
>tr|O65380|O65380_ARATH F12F1.14 protein OS=Arabidopsis thaliana GN=F12F1.14 PE=4 SV=1 Length = 627
Score = 175 bits (444), Expect = 1e-42 Identities = 79/117 (67%), Positives = 102/117 (87%) Frame = +3
Query: 138 QFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINYIL 317 QFGDIYQE F++ L DI+IVKELP ELQSL+L+ IGS+V+D++V KEAKP F++ +IL Sbjct: 239 QFGDIYQEEHFMEYLSPDIRIVKELPKELQSLNLEEIGSVVTDIEVMKEAKPDFYMTHIL 298
Query: 318 PILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMR 488 PILL+NRV+HF GFGNRL+FDP+PF+LQRLRC+CNF+AL F+P+IQ A LLV+R+R Sbjct: 299 PILLKNRVIHFVGFGNRLAFDPLPFELQRLRCRCNFHALNFVPRIQETAALLVKRLR 355
>tr|A7R0N0|A7R0N0_VITVI Chromosome chr10 scaffold_312, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011507001 PE=4 SV=1 Length = 510
Score = 174 bits (442), Expect = 2e-42 Identities = 81/127 (63%), Positives = 105/127 (82%) Frame = +3
Query: 132 LGQFGDIYQENFFIDILKYDIKIVKELPNELQSLDLDAIGSIVSDMDVPKEAKPSFFINY 311 + QF DIYQE F++ L DI+IVKELP ELQSLDL+AIGS+V+D+D+ KE++ SF+ Sbjct: 127 VSQFSDIYQEEHFVNYLTPDIRIVKELPKELQSLDLEAIGSVVTDVDIMKESRLSFYRKN 186
Query: 312 ILPILLRNRVVHFFGFGNRLSFDPIPFDLQRLRCKCNFYALKFIPKIQRAAGLLVRRMRE 491 ILPILL+ RVVHF GFGNRL+FDPIPF+LQRLRC+CNF+AL+F+PKIQ LL+++MR+ Sbjct: 187 ILPILLQKRVVHFVGFGNRLAFDPIPFELQRLRCRCNFHALRFVPKIQETGALLLKKMRQ 246
Query: 492 QDKRWGP 512 +R GP Sbjct: 247 NVRRSGP 253
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