DK956374 |
Clone id |
TST39A01NGRL0025_J05 |
Library |
TST39 |
Length |
615 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_J05. 5' end sequence. |
Accession |
DK956374 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1903Contig1 |
Sequence |
CACGGAGAGAGGCACACAGCAAGGAGGGTTTTGTCTGCAGGGAGAGGCGCCCGGCGAAGA TCTGAAAGAGCGAAAACGCAATGGCGTCCCCACCCAAAGAAGAGGTAGCAGTGGCAGCGT CTCCCCCGGCAGCCTCACCGCCAATCACTCTCAGAAAGCCCACCTTCGTAAAAGTAGATC AGCTGCGCCCGGGCACATCTGGCCACACTCTCACTGTCAAGGTTGTCAGCTCCAAGGTTG TTTTGCAAAAGGCTCGCCCTGATGGTACCCACCTTCGCCATGTCCGCATCTCGGAGTGCC TTGTTGGTGATGATACTGGAGTTATTGTATTCACAGCAAGAAATGACCAAGTTGATGTTG TGAAGGAGGGAGTCACCGTGATACTACGGAATGCAAAAATTGACATGTTTAAAGGATCAA TGCGTCTGGCTGTGGACAAATGGGGACGTATTGAAGTAACCGAACCAGCAAGCTTCACTG TGAAGGAGGAGAACAACCTCTCTTTAGTGGAGTATGAGCTTGTGCAAGTGGAAGGACAAT AGAGGCTGGTTGTGTTGGCTTTAAACCTTAGCATTTGGATAAGAATGGAAGAAAGATCGT GAAACTGCTGCTGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O49453 |
Definition |
sp|O49453|Y4844_ARATH Uncharacterized protein At4g28440 OS=Arabidopsis thaliana |
Align length |
134 |
Score (bit) |
155.0 |
E-value |
2.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TST7 |
Definition |
tr|A9TST7|A9TST7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
128 |
Score (bit) |
195.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956374|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_J05, 5' (615 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TST7|A9TST7_PHYPA Predicted protein OS=Physcomitrella paten... 195 2e-48 tr|A7QNV6|A7QNV6_VITVI Chromosome chr1 scaffold_135, whole genom... 191 2e-47 tr|A7PMA7|A7PMA7_VITVI Chromosome chr14 scaffold_21, whole genom... 191 4e-47 tr|A5C3Z4|A5C3Z4_VITVI Putative uncharacterized protein OS=Vitis... 189 8e-47 tr|Q45NM5|Q45NM5_MEDSA Putative uncharacterized protein (Fragmen... 187 4e-46 tr|A9NK64|A9NK64_PICSI Putative uncharacterized protein OS=Picea... 186 7e-46 tr|A9NWD2|A9NWD2_PICSI Putative uncharacterized protein OS=Picea... 186 9e-46 tr|B7FKB1|B7FKB1_MEDTR Putative uncharacterized protein OS=Medic... 186 1e-45 tr|A9PCK0|A9PCK0_POPTR Putative uncharacterized protein OS=Popul... 184 5e-45 tr|Q9ZUC0|Q9ZUC0_ARATH F5O8.30 protein (Putative uncharacterized... 183 6e-45 tr|A7PJ85|A7PJ85_VITVI Chromosome chr12 scaffold_18, whole genom... 181 3e-44 tr|A9PCG5|A9PCG5_POPTR Putative uncharacterized protein OS=Popul... 179 1e-43 tr|A9T5G0|A9T5G0_PHYPA Predicted protein OS=Physcomitrella paten... 178 2e-43 tr|A9P929|A9P929_POPTR Putative uncharacterized protein OS=Popul... 177 4e-43 tr|B6SHT0|B6SHT0_MAIZE OB-fold nucleic acid binding domain conta... 173 6e-42 tr|Q5JML8|Q5JML8_ORYSJ cDNA clone:J013108H01, full insert sequen... 172 2e-41 tr|B8A9R0|B8A9R0_ORYSI Putative uncharacterized protein OS=Oryza... 171 3e-41 tr|A5BEE0|A5BEE0_VITVI Putative uncharacterized protein OS=Vitis... 171 4e-41 tr|A2WML6|A2WML6_ORYSI Putative uncharacterized protein OS=Oryza... 170 5e-41 tr|Q9FTU2|Q9FTU2_ORYSJ cDNA clone:J033067D04, full insert sequen... 170 7e-41 tr|B4FR03|B4FR03_MAIZE OB-fold nucleic acid binding domain conta... 169 9e-41 tr|Q8RYC3|Q8RYC3_ARATH Expressed protein (Putative uncharacteriz... 169 2e-40 tr|A7QPS6|A7QPS6_VITVI Chromosome chr10 scaffold_138, whole geno... 167 4e-40 tr|Q5W707|Q5W707_ORYSJ Os05g0244600 protein OS=Oryza sativa subs... 166 8e-40 tr|A2Y2A8|A2Y2A8_ORYSI Putative uncharacterized protein OS=Oryza... 166 8e-40 tr|A5AJH4|A5AJH4_VITVI Putative uncharacterized protein OS=Vitis... 165 2e-39 tr|Q9XIJ0|Q9XIJ0_ARATH T10O24.24 OS=Arabidopsis thaliana GN=At1g... 163 6e-39 tr|Q93W05|Q93W05_ARATH Putative uncharacterized protein At1g1059... 163 6e-39 tr|A7Q767|A7Q767_VITVI Chromosome chr18 scaffold_59, whole genom... 162 1e-38 tr|A9P1W6|A9P1W6_PICSI Putative uncharacterized protein OS=Picea... 158 2e-37
>tr|A9TST7|A9TST7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110528 PE=4 SV=1 Length = 137
Score = 195 bits (496), Expect = 2e-48 Identities = 97/128 (75%), Positives = 106/128 (82%) Frame = +3
Query: 147 TLRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVI 326 +LRKP FVKVDQLRPGT+GH QKARPDG +R VRI+ECLVGDDTGVI Sbjct: 7 SLRKPVFVKVDQLRPGTAGHTLTVKVVSTKLVLQKARPDGNQVRQVRIAECLVGDDTGVI 66
Query: 327 VFTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSL 506 VFTARNDQVD++KEGVTVILRNAKIDMFKGSMRLAVDKWGR+E+TE A F VKE+NN SL Sbjct: 67 VFTARNDQVDLMKEGVTVILRNAKIDMFKGSMRLAVDKWGRVELTEAADFVVKEDNNFSL 126
Query: 507 VEYELVQV 530 VEYELV V Sbjct: 127 VEYELVNV 134
>tr|A7QNV6|A7QNV6_VITVI Chromosome chr1 scaffold_135, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002689001 PE=4 SV=1 Length = 137
Score = 191 bits (486), Expect = 2e-47 Identities = 92/127 (72%), Positives = 106/127 (83%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKP F K++QLRPGTSGH QK RPDG +R +RI+ECLVGD+TG+I+ Sbjct: 8 LRKPVFTKIEQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMII 67
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++KEG TV+LRNAKIDMFKGSMRLAVDKWGR+EVTEPASF+VKE+NNLSLV Sbjct: 68 FTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLSLV 127
Query: 510 EYELVQV 530 EYELV V Sbjct: 128 EYELVNV 134
>tr|A7PMA7|A7PMA7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020747001 PE=4 SV=1 Length = 137
Score = 191 bits (484), Expect = 4e-47 Identities = 94/127 (74%), Positives = 104/127 (81%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 +RKP F KVDQLRPGTSGH QK RPDG +R +RI+ECLVGD+TG+IV Sbjct: 8 MRKPVFTKVDQLRPGTSGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMIV 67
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++K TVILRNAKIDMFKGSMRLAVDKWGR+EVTEPASFTVKE+NNLSLV Sbjct: 68 FTARNDQVDLMKPDTTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLV 127
Query: 510 EYELVQV 530 EYELV V Sbjct: 128 EYELVNV 134
>tr|A5C3Z4|A5C3Z4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018558 PE=4 SV=1 Length = 137
Score = 189 bits (481), Expect = 8e-47 Identities = 91/127 (71%), Positives = 105/127 (82%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKP F K++QLRPGT GH QK RPDG +R +RI+ECLVGD+TG+I+ Sbjct: 8 LRKPVFTKIEQLRPGTXGHTLTVKVVSSKMVLQKGRPDGPQVRQMRIAECLVGDETGMII 67
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++KEG TV+LRNAKIDMFKGSMRLAVDKWGR+EVTEPASF+VKE+NNLSLV Sbjct: 68 FTARNDQVDLMKEGSTVVLRNAKIDMFKGSMRLAVDKWGRVEVTEPASFSVKEDNNLSLV 127
Query: 510 EYELVQV 530 EYELV V Sbjct: 128 EYELVNV 134
>tr|Q45NM5|Q45NM5_MEDSA Putative uncharacterized protein (Fragment) OS=Medicago sativa PE=2 SV=1 Length = 164
Score = 187 bits (475), Expect = 4e-46 Identities = 91/127 (71%), Positives = 104/127 (81%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKPTF KVDQLRPGTSGH QK RPDG R +RI+E LVGD+TG+I+ Sbjct: 36 LRKPTFTKVDQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMII 95
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++K+G T+ILRNAKIDMFKGSMRLAVDKWGR+EVT+PA FTVKE+NNLSL+ Sbjct: 96 FTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLSLI 155
Query: 510 EYELVQV 530 EYELV V Sbjct: 156 EYELVNV 162
>tr|A9NK64|A9NK64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 140
Score = 186 bits (473), Expect = 7e-46 Identities = 91/128 (71%), Positives = 106/128 (82%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKP F K+DQLRPGTSGH QK RPD + +R +RI+ECL+GD+TG+++ Sbjct: 12 LRKPVFTKIDQLRPGTSGHNLIVKVTSAKIVLQKGRPD-SQVRQMRIAECLIGDETGIVI 70
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARN+QVD++KEG TVILRNAKIDMFKGSMRLAVDKWGRIEVTEPA F+VKEENNLSLV Sbjct: 71 FTARNEQVDLMKEGSTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPAEFSVKEENNLSLV 130
Query: 510 EYELVQVE 533 EYELV V+ Sbjct: 131 EYELVNVQ 138
>tr|A9NWD2|A9NWD2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 137
Score = 186 bits (472), Expect = 9e-46 Identities = 92/127 (72%), Positives = 103/127 (81%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 +RKP F KVDQLRPGTSGH QK RPDG+ +R +RI+ECLVGD+TGVIV Sbjct: 8 MRKPVFTKVDQLRPGTSGHTLTVKVVTAKMVLQKGRPDGSQVRQMRIAECLVGDETGVIV 67
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARN+QVD+VK G TVILRNAKIDMF+GSMRLAVDKWGR+EVTE A F VKE+NNLSLV Sbjct: 68 FTARNEQVDLVKAGSTVILRNAKIDMFRGSMRLAVDKWGRVEVTEDADFEVKEDNNLSLV 127
Query: 510 EYELVQV 530 EYELV V Sbjct: 128 EYELVNV 134
>tr|B7FKB1|B7FKB1_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 136
Score = 186 bits (471), Expect = 1e-45 Identities = 90/127 (70%), Positives = 104/127 (81%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKPTF KV+QLRPGTSGH QK RPDG R +RI+E LVGD+TG+I+ Sbjct: 8 LRKPTFTKVEQLRPGTSGHTLTVKVVNTKMVMQKGRPDGPQPRQMRIAESLVGDETGMII 67
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++K+G T+ILRNAKIDMFKGSMRLAVDKWGR+EVT+PA FTVKE+NNLSL+ Sbjct: 68 FTARNDQVDLLKDGSTIILRNAKIDMFKGSMRLAVDKWGRVEVTDPADFTVKEDNNLSLI 127
Query: 510 EYELVQV 530 EYELV V Sbjct: 128 EYELVNV 134
>tr|A9PCK0|A9PCK0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 138
Score = 184 bits (466), Expect = 5e-45 Identities = 90/127 (70%), Positives = 102/127 (80%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 LRKP F KV+QLRPGT GH QK R DG +R +RI+ECLVGD+TG+I+ Sbjct: 9 LRKPVFTKVEQLRPGTFGHTLTVKVVSVKMVLQKGRADGPQVRQMRIAECLVGDETGLII 68
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++KE TVILRNAKIDMFKGSMRLAVDKWGR+EVTEPA FTVKE+NNLSL+ Sbjct: 69 FTARNDQVDLMKEDSTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPADFTVKEDNNLSLI 128
Query: 510 EYELVQV 530 EYELV V Sbjct: 129 EYELVNV 135
>tr|Q9ZUC0|Q9ZUC0_ARATH F5O8.30 protein (Putative uncharacterized protein At1g23750) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g23750 PE=2 SV=1 Length = 137
Score = 183 bits (465), Expect = 6e-45 Identities = 90/127 (70%), Positives = 101/127 (79%) Frame = +3
Query: 150 LRKPTFVKVDQLRPGTSGHXXXXXXXXXXXXXQKARPDGTHLRHVRISECLVGDDTGVIV 329 L+KP F KVDQLRPGTSGH QK R DG R +RISEC+VGD+TGVIV Sbjct: 9 LKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDETGVIV 68
Query: 330 FTARNDQVDVVKEGVTVILRNAKIDMFKGSMRLAVDKWGRIEVTEPASFTVKEENNLSLV 509 FTARNDQVD++KEG TV LRNAKIDM+KGSMRLAVDKWGR+EVTEPASF VKE+ N+SL+ Sbjct: 69 FTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDTNMSLI 128
Query: 510 EYELVQV 530 EYELV V Sbjct: 129 EYELVNV 135
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