DK956327 |
Clone id |
TST39A01NGRL0025_H06 |
Library |
TST39 |
Length |
594 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0025_H06. 5' end sequence. |
Accession |
DK956327 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1286Contig1 |
Sequence |
GTGCCAAGGAGATACGGTTCAAGAGATAGAGGGCGGAGCTACAGCCGCAGCCCAAGTAGG AGTTGGGGTAGAAGTCGTAGCCGAAGCCGGAGCCGGAGTCCAAGCCGAAGTGTAAGCAGA AGTCGGAGCCGAAGTCGCAGCTATGATAGACACAGTGATGATCGTAGAAGATGGTCTCCG TATAGAGGACGTGGTTCATACAGGAGTAGAACACCAAGTTCTCGATCACCCCTCCGCAGC CGCTCTCCACTAAGCAAACCTGTAAAGGCTGCCCCAGTGACTAATGTTTTGGGTGTAGAA GAGAGGAAGTCACCCGCCATTCTGGAAGCCCCAATCACTGAAGAAGCTAATGGTTATTCA GCTAATGAACGTGTATCGGAAGCTAATGTGCCTGTGTCGGAGCCAGTAGCTGCATCAGCT CCTCTCGAAGAAATAGCCGAAGATTCAATTAAGCTGGTGGATGGTCCCATTGAGCCATTG GCCATTGATGGTACCTCTATTGCGCCTGATGACCAGTAGAATATCTTGATGCGCAAGATT TGTTACATGCTTCCTTTATTCAAAAACAGGTGCATGCTCCCCTGTAATGGGAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8A014 |
Definition |
sp|Q8A014|LPXD_BACTN UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase OS=Bacteroides thetaiotaomicron |
Align length |
40 |
Score (bit) |
33.1 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7UR99 |
Definition |
tr|A7UR99|A7UR99_ANOGA AGAP007563-PA OS=Anopheles gambiae |
Align length |
83 |
Score (bit) |
40.8 |
E-value |
0.059 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956327|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0025_H06, 5' (594 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7UR99|A7UR99_ANOGA AGAP007563-PA OS=Anopheles gambiae GN=AGA... 41 0.059 tr|B6G891|B6G891_9ACTN Putative uncharacterized protein OS=Colli... 38 0.38 tr|A1C839|A1C839_ASPCL PT repeat family protein OS=Aspergillus c... 38 0.50 tr|Q0EZ74|Q0EZ74_9PROT Translation initiation factor IF-2 OS=Mar... 37 1.1 tr|Q1I778|Q1I778_PSEE4 Putative uncharacterized protein OS=Pseud... 36 1.5 tr|B4W8H9|B4W8H9_9CAUL TonB-dependent receptor domain protein OS... 36 1.9 tr|A9VBW6|A9VBW6_MONBE Predicted protein OS=Monosiga brevicollis... 36 1.9 tr|B0S5J7|B0S5J7_DANRE Aspartate beta-hydroxylase OS=Danio rerio... 35 4.3 tr|Q470H5|Q470H5_RALEJ Probable proline-rich protein OS=Ralstoni... 35 4.3 tr|A4WX08|A4WX08_RHOS5 Antenna complex, alpha/beta subunit OS=Rh... 35 4.3 tr|B5HTP5|B5HTP5_9ACTO Putative uncharacterized protein OS=Strep... 35 4.3 tr|Q9W072|Q9W072_DROME CG13924 OS=Drosophila melanogaster GN=CG1... 35 4.3 tr|Q9PUR8|Q9PUR8_PSEAM Pepsinogen A form IIb OS=Pseudopleuronect... 34 5.5 tr|A7JX56|A7JX56_PASHA Putative uncharacterized protein OS=Mannh... 34 5.6 tr|B8BDD3|B8BDD3_ORYSI Putative uncharacterized protein OS=Oryza... 34 5.6 tr|A1R566|A1R566_ARTAT Translation initiation factor IF-3 OS=Art... 34 7.3 tr|B6MZJ1|B6MZJ1_BRAFL Putative uncharacterized protein OS=Branc... 34 7.3 tr|Q0UV52|Q0UV52_PHANO Putative uncharacterized protein OS=Phaeo... 34 7.3 tr|A7ELN0|A7ELN0_SCLS1 Putative uncharacterized protein OS=Scler... 34 7.3 tr|Q894M3|Q894M3_CLOTE Putative uncharacterized protein OS=Clost... 33 9.4 tr|Q6BGT4|Q6BGT4_DEBHA DEHA2G24112p OS=Debaryomyces hansenii GN=... 33 9.4 tr|Q6HCJ0|Q6HCJ0_BACHK Cell division protein OS=Bacillus thuring... 33 9.5 tr|A3PG62|A3PG62_RHOS1 Antenna complex, alpha/beta subunit OS=Rh... 33 9.5 tr|Q7RF78|Q7RF78_PLAYO Neurofilament protein H form H2 OS=Plasmo... 33 9.5 tr|Q23635|Q23635_CAEEL Putative uncharacterized protein OS=Caeno... 33 9.5
>tr|A7UR99|A7UR99_ANOGA AGAP007563-PA OS=Anopheles gambiae GN=AGAP007563 PE=4 SV=1 Length = 15844
Score = 40.8 bits (94), Expect = 0.059 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Frame = +1
Query: 262 VKAAPVTNVLGVEERKSPAIL-EAPITEEANGYSANERVSEANVPVSEPVAASAPLEEIA 438 V AAPV VL V ++ A+ E P E+A V+E + VS+P+ +AP+E + Sbjct: 12465 VAAAPVEEVLDVAVEQTDAVTAELPQEEQAAASEIPSAVTETPI-VSKPILEAAPIEAVL 12523
Query: 439 EDSIKLVDGPIEPLAIDGTSIAP 507 E ++ G + L ++G +AP Sbjct: 12524 EQQVE-ETGTADALKLEGEQLAP 12545
Score = 33.5 bits (75), Expect = 9.5 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +1
Query: 256 KPV-KAAPVTNVLG--VEERKSPAILEAPITEEANGYSANERVSEANVPVSEPVAASAPL 426 KP+ +AAP+ VL VEE + L+ E+ + +E + ++P +AP+ Sbjct: 12511 KPILEAAPIEAVLEQQVEETGTADALKLE-GEQLAPVEVPDDATEKPLVQAKPTLEAAPM 12569
Query: 427 EEIAEDSIKLVDGPIEPLAIDGTSIAPDD 513 EE+ E ++ D + LA+D +AP D Sbjct: 12570 EELLEQQVEETDN-VPSLALDTVQVAPSD 12597
>tr|B6G891|B6G891_9ACTN Putative uncharacterized protein OS=Collinsella stercoris DSM 13279 GN=COLSTE_00281 PE=4 SV=1 Length = 338
Score = 38.1 bits (87), Expect = 0.38 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = -2
Query: 398 DTGTLASDTRSLAE*PLASSVIGASRMAGDFLSSTPK 288 DT +LA +R+LAE P+ +IG SRMA DF S TP+ Sbjct: 111 DTFSLAEASRALAERPVDGVIIGMSRMAPDFESFTPQ 147
>tr|A1C839|A1C839_ASPCL PT repeat family protein OS=Aspergillus clavatus GN=ACLA_076000 PE=4 SV=1 Length = 1885
Score = 37.7 bits (86), Expect = 0.50 Identities = 24/86 (27%), Positives = 38/86 (44%) Frame = +1
Query: 256 KPVKAAPVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANVPVSEPVAASAPLEEI 435 +P P+ VEE + +EAP + E V E PV +PVA P EE+ Sbjct: 1296 EPAAEEPIAEAAAVEEPVAEKQVEAP--------AVVEHVQEEEKPVEKPVAVVEPQEEV 1347
Query: 436 AEDSIKLVDGPIEPLAIDGTSIAPDD 513 A + D +P+ +D + A ++ Sbjct: 1348 AAEPAVTQDLAEDPVVVDEVAKAVEE 1373
>tr|Q0EZ74|Q0EZ74_9PROT Translation initiation factor IF-2 OS=Mariprofundus ferrooxydans PV-1 GN=SPV1_07641 PE=3 SV=1 Length = 1045
Score = 36.6 bits (83), Expect = 1.1 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +1
Query: 259 PVKAAPVTNVLGVEERKSPAILEAPITEEANGYSA-NERVSEANVPVSEPVAASAP 423 P AAP L +R + A+ + +TE AN +A ++ ++A SEP AA AP Sbjct: 119 PAAAAPKAKPLAPAQRAAAAVEQRKLTEAANKAAAEQQKAADAKAAASEPAAAEAP 174
>tr|Q1I778|Q1I778_PSEE4 Putative uncharacterized protein OS=Pseudomonas entomophila (strain L48) GN=PSEEN3788 PE=4 SV=1 Length = 308
Score = 36.2 bits (82), Expect = 1.5 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +1
Query: 259 PVKAAPVTNVLGVEERKSPAILEA--PITEEANGYSANERVSEANVPVSEPVAASAPLEE 432 PV A P + + P +L P+ E A E V+EAN+PV V A+ P+ Sbjct: 75 PVAARPFAEP---QAKVLPTVLPPLQPVPEPAAAVVDTEVVAEANIPVLTEVQAAEPVAP 131
Query: 433 IAEDSIKLVDGPIEPLAIDG 492 + + + P+ P +DG Sbjct: 132 LVDVHLPAPAAPVPPATVDG 151
>tr|B4W8H9|B4W8H9_9CAUL TonB-dependent receptor domain protein OS=Brevundimonas sp. BAL3 GN=BBAL3_1307 PE=4 SV=1 Length = 673
Score = 35.8 bits (81), Expect = 1.9 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 18/100 (18%) Frame = +1
Query: 259 PVKAAPVTNVLGVEERKSPAILEAPITEEANGYSANE----------------RVSEANV 390 P A +T V+G+ ER S +L+ + E +A S+ Sbjct: 117 PYGAGALTGVIGLTERDSGGVLDLSVAERGGARAAGSGSTMLGPVGVTLSGLYEASDGYT 176
Query: 391 PVSEPVAASA--PLEEIAEDSIKLVDGPIEPLAIDGTSIA 504 PV P A +A PL+ + + VD P++ L ++G +++ Sbjct: 177 PVRGPAAGAADTPLDLDSRSAALRVDAPLDGLNLEGANLS 216
>tr|A9VBW6|A9VBW6_MONBE Predicted protein OS=Monosiga brevicollis GN=34462 PE=4 SV=1 Length = 550
Score = 35.8 bits (81), Expect = 1.9 Identities = 26/83 (31%), Positives = 32/83 (38%) Frame = +1
Query: 268 AAPVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANVPVSEPVAASAPLEEIAEDS 447 AAP VEE +P AP E A A EA P E +AP EE A + Sbjct: 217 AAPTEESAPVEEAAAPTEEPAPAEESAPAEEAAAPAEEAAAPAEETAEEAAPAEEAAAPA 276
Query: 448 IKLVDGPIEPLAIDGTSIAPDDQ 516 + P E A AP ++ Sbjct: 277 EE--SAPTEEAAAPAEEAAPAEE 297
>tr|B0S5J7|B0S5J7_DANRE Aspartate beta-hydroxylase OS=Danio rerio GN=asph PE=4 SV=1 Length = 472
Score = 34.7 bits (78), Expect = 4.3 Identities = 24/71 (33%), Positives = 36/71 (50%) Frame = +1
Query: 265 KAAPVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANVPVSEPVAASAPLEEIAED 444 + APV + VEE ++EA EEA + E N+PV EPV P+EE E+ Sbjct: 304 ETAPVEEAVEVEEEAVEEVVEA---EEAVEELESVDEVEENLPVEEPVEDLEPVEEPVEE 360
Query: 445 SIKLVDGPIEP 477 + ++ + EP Sbjct: 361 TEQVEEAFEEP 371
>tr|Q470H5|Q470H5_RALEJ Probable proline-rich protein OS=Ralstonia eutropha (strain JMP134) GN=Reut_A1843 PE=4 SV=1 Length = 207
Score = 34.7 bits (78), Expect = 4.3 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = +1
Query: 274 PVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANVPVSEPVAASAPLEEIAEDS 447 PVT L V K+PA AP TE++N +S PVAA +P E A S Sbjct: 68 PVTEALPVSPSKAPAQASAPATEDSNLFSLYAMRRVEAPAAQAPVAALSPASEDAVHS 125
>tr|A4WX08|A4WX08_RHOS5 Antenna complex, alpha/beta subunit OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=Rsph17025_3038 PE=3 SV=1 Length = 239
Score = 34.7 bits (78), Expect = 4.3 Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 5/62 (8%) Frame = +1
Query: 268 AAPVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANV-----PVSEPVAASAPLEE 432 AAP VEE +PA AP+ E A V EA V P +EPVA +A EE Sbjct: 111 AAPAEEAAPVEEAAAPAEEAAPVEEAAAPAEEAAPVEEAVVAEEAAPAAEPVAEAAAAEE 170
Query: 433 IA 438 A Sbjct: 171 AA 172
Score = 33.9 bits (76), Expect = 7.3 Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 3/63 (4%) Frame = +1
Query: 259 PVKAAPVTNVLGVEERKSPAILEAPITEEANGYSANERVSEANVPVSE--PV-AASAPLE 429 PV+ A V VEE +PA AP+ E A V EA P E PV A+AP E Sbjct: 82 PVEEAAVEEAAPVEEAAAPAEEAAPVEEAAAPAEEAAPVEEAAAPAEEAAPVEEAAAPAE 141
Query: 430 EIA 438 E A Sbjct: 142 EAA 144
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