DK955988
Clone id TST39A01NGRL0024_J01
Library
Length 596
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CGAAGCTTGGTTTGTAAAATGTAAATATAAATATTCTGATTTTAGAATCACAACCCAGAA
ATATCTTTGAGTGGCGTCTATTTGAAAAGCTCCTCTTTTGTGGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGG
GGTGGTGGCGGAGGTTATAGCTCAGGCGAAGGTGGTGGAGGAAGAGGTGGAGATGGAGGT
GGAAATGCTTGCTACACTTGCGACAAATCTGGTCACTTCTCCCCAGACTTCCTCGAGCAG
AGTGGATACCGATGTACCAATGTTTTTTCCCCTCATCATGTTGGTTTTGGTGGAAGCTAT
TCCCTCCTGCTATGAGACTAGATGAGACGATTCACATCTCTTTTTCTTAAAGCTTTGTTT
TTCATTCCAGGGCTGCTATTATGTTAGTTTTGTTATTCTTCTACTGGTTGAAGCAGAGAG
CGAAATGCCTAATGTTAGCTGGTCTTCATTGGTGGCTGCCCGTTCATTGGGAACAAGAAT
TGGCACAATCTCGACCCGTCATGTTGATCCTTATTCTTTCGAGTGGAGAACATCTG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955988|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J01, 5'
(596 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A6WEV4
Definition tr|A6WEV4|A6WEV4_KINRD Putative conserved membrane protein OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216)
Align length 37
Score (bit) 37.0
E-value 0.86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955988|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J01, 5'
(596 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6WEV4|A6WEV4_KINRD Putative conserved membrane protein OS=Ki... 37 0.86
tr|Q4IXT7|Q4IXT7_AZOVI Phosphatidate cytidylyltransferase OS=Azo... 34 7.3

>tr|A6WEV4|A6WEV4_KINRD Putative conserved membrane protein
OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM
14245 / SRS30216) GN=Krad_3880 PE=4 SV=1
Length = 375

Score = 37.0 bits (84), Expect = 0.86
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +3

Query: 471 KQRAKCLMLAGLHWWLPV-HWEQELAQSRPVMLILIL 578
++ L+LAGL W LPV HW LAQ+RP+ L++++
Sbjct: 314 RRHGPLLVLAGLPWLLPVLHWGPVLAQTRPLSLLVLV 350


>tr|Q4IXT7|Q4IXT7_AZOVI Phosphatidate cytidylyltransferase
OS=Azotobacter vinelandii DJ GN=AvinDRAFT_3592 PE=3 SV=1
Length = 271

Score = 33.9 bits (76), Expect = 7.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3

Query: 432 AAIMLVLLFFYWLKQRAKCLMLAGLHWWL 518
AA+ +LL YWL A +ML G+ WWL
Sbjct: 60 AAVAALLLLLYWLPALAAGVMLLGILWWL 88