DK955966 |
Clone id |
TST39A01NGRL0024_I03 |
Library |
TST39 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_I03. 5' end sequence. |
Accession |
DK955966 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CCCGTGTTCTTGTGCTCTCTCTGTGTGTGCGTACGAGAGAGCGAGAAACCATGGGTCTCA CCTTCACCAAGCTCTTCCAGCGATTGTTCGCCAAGAAGGAGATGCGCATCTTGATGGTTG GTCTCGATGCTGCTGGAAAAACCACCATTCTCTACAAGCTCAAGCTTGGCGAGATCGTGA CTACCATTCCAACCATAGGGTTTAATGTTGAAACTGTGGAGTACAAGAACATCAGCTTCA CAGTGTGGGATGTTGGAGGCCAAGATAAGATTCGCCCTCTTTGGAGGCACTACTTCCAGA ATACCCAAGGCCTGATCTTTGTCGTGGACAGTAATGACAGGGATCGTGTGGTGGAAGCTC GCGATGAACTTCATAGAATGCTTAATGAGGATGAGCTACGGGATGCTGTGCTTCTTGTCT TCGCAAACAAGCAGGATCTTCCCAATGCTATGAATGCAGCTGAGATCACAGACAAATTGG GCCTACACTCTCTTCGTCAACGCCACTGGTATATTCAGAGTACATGTGCCACATCAGGCG AAGGTCTTTACGAGGGCTTGGATTGGCTCTCTGGTAACATTGCCAGCAAGGGTTAAGAGA AGGTTTCCTAATAAACATGAACTTTTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q06396 |
Definition |
sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica |
Align length |
180 |
Score (bit) |
358.0 |
E-value |
1.0e-98 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q677H6 |
Definition |
tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis |
Align length |
192 |
Score (bit) |
362.0 |
E-value |
8.0e-99 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955966|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_I03, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hya... 362 8e-99 tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea... 361 2e-98 tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativ... 360 4e-98 tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago tru... 360 4e-98 tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subs... 359 9e-98 tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medic... 359 9e-98 tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza... 359 9e-98 tr|Q0JIB5|Q0JIB5_ORYSJ cDNA clone:001-047-G02, full insert seque... 358 1e-97 tr|B8AB93|B8AB93_ORYSI Putative uncharacterized protein OS=Oryza... 358 1e-97 tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medic... 358 1e-97 tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Popul... 358 1e-97 tr|Q5XUV1|Q5XUV1_WHEAT ADP-ribosylation factor OS=Triticum aesti... 358 1e-97 tr|Q8W4Z3|Q8W4Z3_GOSHI ADP-ribosylation factor (ADP-ribosylation... 358 2e-97 tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea m... 358 2e-97 tr|Q76ME3|Q76ME3_WHEAT ADP-ribosylation factor OS=Triticum aesti... 357 2e-97 tr|Q70XK1|Q70XK1_HORVD ADP-ribosylation factor 1-like protein OS... 357 2e-97 tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus car... 357 2e-97 tr|Q0DH67|Q0DH67_ORYSJ Os05g0489600 protein OS=Oryza sativa subs... 357 2e-97 tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medic... 357 2e-97 tr|B3TLZ8|B3TLZ8_ELAGV ADP-ribosylation factor OS=Elaeis guineen... 357 2e-97 tr|A9TBY9|A9TBY9_PHYPA Arf1_5/ArfA-family small GTPase OS=Physco... 357 2e-97 tr|A9SED7|A9SED7_PHYPA Predicted protein OS=Physcomitrella paten... 357 2e-97 tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Popul... 357 2e-97 tr|A7QNZ2|A7QNZ2_VITVI Chromosome chr1 scaffold_135, whole genom... 357 2e-97 tr|A7Q0T1|A7Q0T1_VITVI Chromosome chr7 scaffold_42, whole genome... 357 2e-97 tr|A7PRL9|A7PRL9_VITVI Chromosome chr14 scaffold_27, whole genom... 357 2e-97 tr|A2Y5Z6|A2Y5Z6_ORYSI Putative uncharacterized protein OS=Oryza... 357 2e-97 tr|Q9LYJ3|Q9LYJ3_ARATH ADP-ribosylation factor-like protein OS=A... 357 3e-97 tr|Q3HVM8|Q3HVM8_SOLTU Putative uncharacterized protein OS=Solan... 357 3e-97 tr|Q3HVL9|Q3HVL9_SOLTU ARF-like small GTPase-like protein OS=Sol... 357 3e-97
>tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis GN=ARF PE=2 SV=1 Length = 199
Score = 362 bits (930), Expect = 8e-99 Identities = 180/192 (93%), Positives = 183/192 (95%) Frame = +3
Query: 18 SLCVRTRERETMGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 197 SL ++ MGL+FTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI Sbjct: 8 SLSLKPLSHVEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 67
Query: 198 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 377 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR Sbjct: 68 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 127
Query: 378 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 557 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG Sbjct: 128 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 187
Query: 558 LDWLSGNIASKG 593 LDWLS NIASKG Sbjct: 188 LDWLSNNIASKG 199
>tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 361 bits (926), Expect = 2e-98 Identities = 178/180 (98%), Positives = 179/180 (99%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIA+K Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180
>tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativa GN=ARF1 PE=2 SV=1 Length = 181
Score = 360 bits (924), Expect = 4e-98 Identities = 178/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
>tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago truncatula GN=arf1 PE=2 SV=1 Length = 181
Score = 360 bits (924), Expect = 4e-98 Identities = 178/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
>tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0033J23.16 PE=3 SV=1 Length = 181
Score = 359 bits (921), Expect = 9e-98 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
>tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 359 bits (921), Expect = 9e-98 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIA+K Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180
>tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14032 PE=4 SV=1 Length = 354
Score = 359 bits (921), Expect = 9e-98 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT+GEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIASK 180
>tr|Q0JIB5|Q0JIB5_ORYSJ cDNA clone:001-047-G02, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=1 Length = 181
Score = 358 bits (920), Expect = 1e-97 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
>tr|B8AB93|B8AB93_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04181 PE=4 SV=1 Length = 181
Score = 358 bits (920), Expect = 1e-97 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
>tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 358 bits (920), Expect = 1e-97 Identities = 177/180 (98%), Positives = 178/180 (98%) Frame = +3
Query: 51 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 230 MGL+FTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 231 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 410 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 411 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSGNIASK 590 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLS NIASK Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
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