DK955842 |
Clone id |
TST39A01NGRL0024_C20 |
Library |
TST39 |
Length |
553 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_C20. 5' end sequence. |
Accession |
DK955842 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL437Contig1 |
Sequence |
AGCAAATCCTGGTGTGCCTGTGGTGGACATAGATGGAGATGGAAGCTTTCTAATGAATGT CCAAGAATTGGCCACTATTTGCGTCGAGCAGTTGCCGGTGAAGATTATGATCTTAAATAA TCAACATCTTGGGATGGTTGTGCAGTGGGAGGATAGGTTTTACAAGGGAAATAGAGCGCA TACTTATCTGGGGGACCCAAGGGATGAAGAAGCTATTTTCCCCGATTTCTTGAAGATGGC AGAGGGATGCAAGGTTCCGTCTTCTCGTGTGATGAAGAAGTCTGACTTGAGAAGCGCAAT AGAGTTGATGATAAATACACCAGGGCCATATTTATTGGATGTTATTGTGCCCCATCAAGA GCATGTGCTTCCCATGATTCCTAGTGGTGGTTCATTCAATGACATCATCACCGAGGGAGA TGGAAGGAGGACGTACTAATGCAGCAGTTCTGAGTAATCACCTTGAGCCTTTTGTCTGCT TAGGAAGGCACCGATTTTGATGTGTTGTGTCAACCCTCCATCTGTTGGTGAAATTTGAAT CTCCTTTTTTGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P09114 |
Definition |
sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum |
Align length |
138 |
Score (bit) |
228.0 |
E-value |
1.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955842|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_C20, 5' (532 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic OS=... 228 1e-59 sp|P09342|ILVB1_TOBAC Acetolactate synthase 1, chloroplastic OS=... 228 1e-59 sp|P17597|ILVB_ARATH Acetolactate synthase, chloroplastic OS=Ara... 224 2e-58 sp|P27819|ILVB3_BRANA Acetolactate synthase 3, chloroplastic OS=... 222 1e-57 sp|P27818|ILVB1_BRANA Acetolactate synthase 1, chloroplastic OS=... 222 1e-57 sp|Q6K2E8|ILVB1_ORYSJ Acetolactate synthase 1, chloroplastic OS=... 218 2e-56 sp|Q41768|ILVB1_MAIZE Acetolactate synthase 1, chloroplastic OS=... 216 4e-56 sp|Q41769|ILVB2_MAIZE Acetolactate synthase 2, chloroplastic OS=... 212 1e-54 sp|Q7XKQ8|ILVB2_ORYSJ Probable acetolactate synthase 2, chloropl... 199 7e-51 sp|P14874|ILVB2_BRANA Acetolactate synthase 2, chloroplastic OS=... 194 3e-49 sp|P00892|ILVG_ECOLI Acetolactate synthase isozyme 2 large subun... 107 5e-23 sp|P36620|ILVB_SCHPO Acetolactate synthase, mitochondrial OS=Sch... 105 2e-22 sp|O19929|ILVB_CYACA Acetolactate synthase large subunit OS=Cyan... 99 1e-20 sp|Q57725|ILVB_METJA Probable acetolactate synthase large subuni... 98 2e-20 sp|P07342|ILVB_YEAST Acetolactate synthase catalytic subunit, mi... 97 6e-20 sp|Q1XDF6|ILVB_PORYE Acetolactate synthase large subunit OS=Porp... 95 2e-19 sp|P42463|ILVB_CORGL Acetolactate synthase large subunit OS=Cory... 89 1e-17 sp|P69684|ILVB_PORUM Acetolactate synthase large subunit OS=Porp... 86 1e-16 sp|P69683|ILVB_PORPU Acetolactate synthase large subunit OS=Porp... 86 1e-16 sp|O08353|ILVB_METAO Probable acetolactate synthase large subuni... 86 1e-16 sp|O78518|ILVB_GUITH Acetolactate synthase large subunit OS=Guil... 84 3e-16 sp|Q6SSJ3|ILVB_CRYNV Acetolactate synthase, mitochondrial OS=Cry... 84 3e-16 sp|Q5KPJ5|ILVB_CRYNE Acetolactate synthase, mitochondrial OS=Cry... 84 3e-16 sp|P45261|ILVI_HAEIN Acetolactate synthase large subunit OS=Haem... 84 6e-16 sp|P08142|ILVB_ECOLI Acetolactate synthase isozyme 1 large subun... 83 7e-16 sp|Q59498|ILVB_MYCAV Acetolactate synthase OS=Mycobacterium aviu... 82 2e-15 sp|Q9RQ65|ILVI_BUCSC Acetolactate synthase large subunit OS=Buch... 81 3e-15 sp|P37251|ILVB_BACSU Acetolactate synthase large subunit OS=Baci... 80 6e-15 sp|P40811|ILVI_SALTY Acetolactate synthase isozyme 3 large subun... 79 1e-14 sp|P0A622|ILVB_MYCTU Acetolactate synthase OS=Mycobacterium tube... 79 1e-14
>sp|P09114|ILVB2_TOBAC Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1 Length = 664
Score = 228 bits (582), Expect = 1e-59 Identities = 107/138 (77%), Positives = 122/138 (88%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MNVQELATI VE LPVKIM+LNNQHLGMVVQWEDRFYK NRAHTYLG+P Sbjct: 527 VDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPS 586
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 +E IFP+ LK AE C VP++RV + DLR+AI+ M++TPGPYLLDVIVPHQEHVLPMIP Sbjct: 587 NEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIP 646
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+ITEGDGR +Y Sbjct: 647 SGGAFKDVITEGDGRSSY 664
>sp|P09342|ILVB1_TOBAC Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1 Length = 667
Score = 228 bits (582), Expect = 1e-59 Identities = 107/138 (77%), Positives = 122/138 (88%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MNVQELATI VE LPVKIM+LNNQHLGMVVQWEDRFYK NRAHTYLG+P Sbjct: 530 VDIDGDGSFIMNVQELATIKVENLPVKIMLLNNQHLGMVVQWEDRFYKANRAHTYLGNPS 589
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 +E IFP+ LK AE C VP++RV + DLR+AI+ M++TPGPYLLDVIVPHQEHVLPMIP Sbjct: 590 NEAEIFPNMLKFAEACGVPAARVTHRDDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIP 649
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+ITEGDGR +Y Sbjct: 650 SGGAFKDVITEGDGRSSY 667
>sp|P17597|ILVB_ARATH Acetolactate synthase, chloroplastic OS=Arabidopsis thaliana GN=CSR 1.2 PE=1 SV=1 Length = 670
Score = 224 bits (571), Expect = 2e-58 Identities = 103/138 (74%), Positives = 120/138 (86%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MNVQELATI VE LPVK+++LNNQHLGMV+QWEDRFYK NRAHT+LGDP Sbjct: 533 VDIDGDGSFIMNVQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKANRAHTFLGDPA 592
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 E+ IFP+ L A C +P++RV KK+DLR AI+ M++TPGPYLLDVI PHQEHVLPMIP Sbjct: 593 QEDEIFPNMLLFAAACGIPAARVTKKADLREAIQTMLDTPGPYLLDVICPHQEHVLPMIP 652
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+FND+ITEGDGR Y Sbjct: 653 SGGTFNDVITEGDGRIKY 670
>sp|P27819|ILVB3_BRANA Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 652
Score = 222 bits (565), Expect = 1e-57 Identities = 103/138 (74%), Positives = 118/138 (85%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MNVQELATI VE LPVKI++LNNQHLGMV+QWEDRFYK NRAHTYLGDP Sbjct: 515 VDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPA 574
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 E IFP+ L+ A C +P++RV KK +LR AI+ M++TPGPYLLDVI PHQEHVLPMIP Sbjct: 575 RENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIP 634
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+ITEGDGR Y Sbjct: 635 SGGTFKDVITEGDGRTKY 652
>sp|P27818|ILVB1_BRANA Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 655
Score = 222 bits (565), Expect = 1e-57 Identities = 103/138 (74%), Positives = 118/138 (85%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MNVQELATI VE LPVKI++LNNQHLGMV+QWEDRFYK NRAHTYLGDP Sbjct: 518 VDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVMQWEDRFYKANRAHTYLGDPA 577
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 E IFP+ L+ A C +P++RV KK +LR AI+ M++TPGPYLLDVI PHQEHVLPMIP Sbjct: 578 RENEIFPNMLQFAGACGIPAARVTKKEELREAIQTMLDTPGPYLLDVICPHQEHVLPMIP 637
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+ITEGDGR Y Sbjct: 638 SGGTFKDVITEGDGRTKY 655
>sp|Q6K2E8|ILVB1_ORYSJ Acetolactate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS1 PE=2 SV=1 Length = 644
Score = 218 bits (554), Expect = 2e-56 Identities = 99/138 (71%), Positives = 119/138 (86%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSFLMN+QELA I +E LPVK+M+LNNQHLGMVVQWEDRFYK NRAHTYLG+P Sbjct: 507 VDIDGDGSFLMNIQELALIRIENLPVKVMVLNNQHLGMVVQWEDRFYKANRAHTYLGNPE 566
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 E I+PDF+ +A+G +P+ RV KKS++R+AI+ M+ TPGPYLLD+IVPHQEHVLPMIP Sbjct: 567 CESEIYPDFVTIAKGFNIPAVRVTKKSEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIP 626
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+I +GDGR Y Sbjct: 627 SGGAFKDMILDGDGRTVY 644
>sp|Q41768|ILVB1_MAIZE Acetolactate synthase 1, chloroplastic OS=Zea mays GN=ALS1 PE=3 SV=1 Length = 638
Score = 216 bits (551), Expect = 4e-56 Identities = 98/138 (71%), Positives = 119/138 (86%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSFLMNVQELA I +E LPVK+ +LNNQHLGMVVQWEDRFYK NRAHTYLG+P Sbjct: 501 VDIDGDGSFLMNVQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTYLGNPE 560
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 +E I+PDF+ +A+G +P+ RV KK+++R+AI+ M+ TPGPYLLD+IVPHQEHVLPMIP Sbjct: 561 NESEIYPDFVTIAKGFNIPAVRVTKKNEVRAAIKKMLETPGPYLLDIIVPHQEHVLPMIP 620
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+I +GDGR Y Sbjct: 621 SGGAFKDMILDGDGRTVY 638
>sp|Q41769|ILVB2_MAIZE Acetolactate synthase 2, chloroplastic OS=Zea mays GN=ALS2 PE=3 SV=1 Length = 638
Score = 212 bits (539), Expect = 1e-54 Identities = 95/138 (68%), Positives = 117/138 (84%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSFLMN+QELA I +E LPVK+ +LNNQHLGMVVQWEDRFYK NRAHT+LG+P Sbjct: 501 VDIDGDGSFLMNIQELAMIRIENLPVKVFVLNNQHLGMVVQWEDRFYKANRAHTFLGNPE 560
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 +E I+PDF+ +A+G +P+ RV KKS++ +AI+ M+ PGPYLLD+IVPHQEHVLPMIP Sbjct: 561 NESEIYPDFVAIAKGFNIPAVRVTKKSEVHAAIKKMLEAPGPYLLDIIVPHQEHVLPMIP 620
Query: 362 SGGSFNDIITEGDGRRTY 415 SGG+F D+I +GDGR Y Sbjct: 621 SGGAFKDMILDGDGRTVY 638
>sp|Q7XKQ8|ILVB2_ORYSJ Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 PE=2 SV=2 Length = 663
Score = 199 bits (506), Expect = 7e-51 Identities = 92/140 (65%), Positives = 114/140 (81%), Gaps = 2/140 (1%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGS LMN+QELA + VE LPVK+M+LNNQHLGMVVQWEDRFY NRAHTYLG+P Sbjct: 524 VDIDGDGSLLMNIQELAMVRVEDLPVKVMVLNNQHLGMVVQWEDRFYDANRAHTYLGNPA 583
Query: 182 DEEA--IFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPM 355 ++PDF+ +A G +P++RV +K ++R+A+E M+ PGPYLLDV+VPHQEHVLPM Sbjct: 584 ANGGGEVYPDFVTIAGGFGIPAARVTRKGEVRAAVEEMMAAPGPYLLDVVVPHQEHVLPM 643
Query: 356 IPSGGSFNDIITEGDGRRTY 415 IPS G+F DII +GDGR +Y Sbjct: 644 IPSNGAFKDIIVDGDGRSSY 663
>sp|P14874|ILVB2_BRANA Acetolactate synthase 2, chloroplastic OS=Brassica napus PE=3 SV=1 Length = 637
Score = 194 bits (492), Expect = 3e-49 Identities = 85/129 (65%), Positives = 109/129 (84%) Frame = +2
Query: 2 VDIDGDGSFLMNVQELATICVEQLPVKIMILNNQHLGMVVQWEDRFYKGNRAHTYLGDPR 181 VDIDGDGSF+MN+QELATI VE LPVK++++NNQHLGMV+QWED FY NRA ++LGDP Sbjct: 508 VDIDGDGSFIMNIQELATIRVENLPVKVLLINNQHLGMVLQWEDHFYAANRADSFLGDPA 567
Query: 182 DEEAIFPDFLKMAEGCKVPSSRVMKKSDLRSAIELMINTPGPYLLDVIVPHQEHVLPMIP 361 + EA+FPD L A C +P++RV ++ DLR AI+ M++TPGP+LLDV+ PHQ+HVLP+IP Sbjct: 568 NPEAVFPDMLLFAASCGIPAARVTRREDLREAIQTMLDTPGPFLLDVVCPHQDHVLPLIP 627
Query: 362 SGGSFNDII 388 SGG+F DII Sbjct: 628 SGGTFKDII 636
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RWH6 |
Definition |
tr|A9RWH6|A9RWH6_PHYPA Acetolactate synthase OS=Physcomitrella patens subsp. patens |
Align length |
138 |
Score (bit) |
235.0 |
E-value |
1.0e-60 |
Report |
|