DK955695 |
Clone id |
TST39A01NGRL0023_M16 |
Library |
TST39 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_M16. 5' end sequence. |
Accession |
DK955695 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATGAGCTTGTGCTGAAGCTTCCAAGCGCTCTCAAAGAAGCGGGGGTTGTGGATGATGATT ATTCATTGACGGTTAATTTGAGAAGGCTCCATCAACTGCAGCTAAACAGGCCCCTGGCGA ATGATAGCTTGTTTGTAGACCTCGCTGGTTTACTCGAGAATTTTAACAACCTTGAAGATG AGGTTGTACAACTTACACTTCTGAATATGTTTCTTCACGTCGTCTGGTGTTTAAAGTCCA TAGATTTTGACAACCCGGATGAAGCTGGAATGTCCTCTTTGATATCAAAGCGTGATACTT TACTTAAGCAGCTAGAGTCCTTCGCAGGGAGTACCCTTGACAGCTACAAACAGGGGAATG CAAGAAGTCTTTTGTGCTGTACGATATGTGTGATTCTGTCAGACCTCTGGAGTTTTTTCA GCAAAGCTAAGCTATCGGCAACGAAGCTGCCGTCTCTGGGGGTCTCTCCATCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P21709 |
Definition |
sp|P21709|EPHA1_HUMAN Ephrin type-A receptor 1 OS=Homo sapiens |
Align length |
32 |
Score (bit) |
32.7 |
E-value |
0.85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TBQ3 |
Definition |
tr|A9TBQ3|A9TBQ3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
149.0 |
E-value |
5.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955695|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_M16, 5' (475 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TBQ3|A9TBQ3_PHYPA Predicted protein (Fragment) OS=Physcomit... 149 5e-35 tr|B8AYW5|B8AYW5_ORYSI Putative uncharacterized protein OS=Oryza... 119 1e-25 tr|Q6UB39|Q6UB39_ORYSJ SCC3 OS=Oryza sativa subsp. japonica PE=2... 118 2e-25 tr|Q60D95|Q60D95_ORYSJ Os05g0188500 protein OS=Oryza sativa subs... 118 2e-25 tr|A7PU08|A7PU08_VITVI Chromosome chr7 scaffold_31, whole genome... 115 1e-24 tr|A5BEN5|A5BEN5_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-21 tr|A3B0Q1|A3B0Q1_ORYSJ Putative uncharacterized protein OS=Oryza... 101 2e-20 tr|Q8LFH0|Q8LFH0_ARATH Putative sister-chromatide cohesion prote... 97 5e-19 tr|O82265|O82265_ARATH Putative putative sister-chromatide cohes... 97 5e-19 tr|B8NFH2|B8NFH2_ASPFL Putative uncharacterized protein OS=Asper... 37 0.49 tr|Q1VAV0|Q1VAV0_VIBAL Putative uncharacterized protein OS=Vibri... 35 2.4 tr|Q2U7G9|Q2U7G9_ASPOR Predicted protein OS=Aspergillus oryzae G... 33 5.4 tr|B5A967|B5A967_HUMAN Soluble EPHA1 variant 2 OS=Homo sapiens G... 33 9.2 tr|B5A966|B5A966_HUMAN Soluble EPHA1 variant 1 OS=Homo sapiens G... 33 9.2 tr|A8K2T6|A8K2T6_HUMAN Ephrin receptor OS=Homo sapiens PE=2 SV=1 33 9.2 tr|A1L3V3|A1L3V3_HUMAN Ephrin receptor OS=Homo sapiens GN=EPHA1 ... 33 9.2 tr|Q7V3Q9|Q7V3Q9_PROMP Signal recognition particle docking prote... 33 9.3
>tr|A9TBQ3|A9TBQ3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143170 PE=4 SV=1 Length = 988
Score = 149 bits (377), Expect = 5e-35 Identities = 72/157 (45%), Positives = 107/157 (68%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 +L++KL SA+ +A +D+YSL V +++ LF DL G+L +++NLEDE Sbjct: 561 DLLVKLRSAITQAVESEDEYSLAVNLRRLYQLQLAVNFSDNRLFTDLLGILNDYSNLEDE 620
Query: 183 VVQLTLLNMFLHVVWCLKSIDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGNA 362 V++L LLN+FLH+ W LKSID DNPDE + +++KR+ ++QL+S S L+S++Q +A Sbjct: 621 VIRLVLLNVFLHLAWALKSIDLDNPDENFVKEVVTKRNKFMEQLQSVLQSLLESWEQDDA 680
Query: 363 RSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSPS 473 R +L CT+C +LSDLW FS+AKL TKL +L PS Sbjct: 681 RYILTCTMCAVLSDLWCLFSRAKLEGTKLQALSFCPS 717
>tr|B8AYW5|B8AYW5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18752 PE=4 SV=1 Length = 1149
Score = 119 bits (297), Expect = 1e-25 Identities = 58/156 (37%), Positives = 91/156 (58%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 ELVLK+ +A+KE DD+YSL V ND LF D+ +L + ++++E Sbjct: 669 ELVLKVKTAIKEVEAGDDEYSLMVNLKRFYELQLSKPVKNDGLFEDMCRILSHLKDMDNE 728
Query: 183 VVQLTLLNMFLHVVWCLKSIDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGNA 362 V LLNM+L + WCL +ID +NP EA + L+S++ +L ++L + K+G + Sbjct: 729 VKSFLLLNMYLQLAWCLNAIDGENPSEASIDELLSRQSSLFEKLYYYLVVLPTYQKEGRS 788
Query: 363 RSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 ++L C +CVI +++W F K K S+T+L SLG P Sbjct: 789 TTILSCRVCVITAEMWCLFKKPKYSSTRLESLGYLP 824
>tr|Q6UB39|Q6UB39_ORYSJ SCC3 OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 978
Score = 118 bits (295), Expect = 2e-25 Identities = 58/156 (37%), Positives = 91/156 (58%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 ELVLK+ +A+KE DD+YSL V ND LF D+ +L + ++++E Sbjct: 498 ELVLKVKTAIKEVEAGDDEYSLMVNLKRFYELQLSKPVKNDGLFEDMYRILSHLKDMDNE 557
Query: 183 VVQLTLLNMFLHVVWCLKSIDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGNA 362 V LLNM+L + WCL +ID +NP EA + L+S++ +L ++L + K+G + Sbjct: 558 VKSFLLLNMYLQLAWCLNAIDGENPSEASIDELLSRQSSLFEKLYYYLVVLPTYQKEGRS 617
Query: 363 RSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 ++L C +CVI +++W F K K S+T+L SLG P Sbjct: 618 TTILSCRVCVITAEMWCLFKKPKYSSTRLESLGYLP 653
>tr|Q60D95|Q60D95_ORYSJ Os05g0188500 protein OS=Oryza sativa subsp. japonica GN=B1007D10.7 PE=2 SV=1 Length = 1116
Score = 118 bits (295), Expect = 2e-25 Identities = 58/156 (37%), Positives = 91/156 (58%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 ELVLK+ +A+KE DD+YSL V ND LF D+ +L + ++++E Sbjct: 636 ELVLKVKTAIKEVEAGDDEYSLMVNLKRFYELQLSKPVKNDGLFEDMYRILSHLKDMDNE 695
Query: 183 VVQLTLLNMFLHVVWCLKSIDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGNA 362 V LLNM+L + WCL +ID +NP EA + L+S++ +L ++L + K+G + Sbjct: 696 VKSFLLLNMYLQLAWCLNAIDGENPSEASIDELLSRQSSLFEKLYYYLVVLPTYQKEGRS 755
Query: 363 RSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 ++L C +CVI +++W F K K S+T+L SLG P Sbjct: 756 TTILSCRVCVITAEMWCLFKKPKYSSTRLESLGYLP 791
>tr|A7PU08|A7PU08_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023612001 PE=4 SV=1 Length = 1130
Score = 115 bits (288), Expect = 1e-24 Identities = 62/157 (39%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 EL+ KL +A+KE DD+YSL V +SL+ D+ +L++ +++DE Sbjct: 620 ELIAKLKTAIKEVADGDDEYSLLVNLKRLYELQLSRSVPIESLYEDMVMILKSSKSMDDE 679
Query: 183 VVQLTLLNMFLHVVWCLKSI-DFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGN 359 VV L NM LHV WCL +I + D E +SSL+SKR TL +QLE F + + ++G Sbjct: 680 VVSFLLHNMSLHVAWCLHAIINSDTVSEESLSSLLSKRTTLFEQLEHFLYAHTEVQEEGK 739
Query: 360 ARSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 + C +C+IL+ +W F K K S+TKL SLG P Sbjct: 740 RANQPACRVCIILAQVWCLFKKTKFSSTKLESLGYCP 776
>tr|A5BEN5|A5BEN5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016664 PE=4 SV=1 Length = 1616
Score = 105 bits (261), Expect = 1e-21 Identities = 63/183 (34%), Positives = 91/183 (49%), Gaps = 27/183 (14%) Frame = +3
Query: 3 ELVLKLPSALKEAGVV--------------------------DDDYSLTVXXXXXXXXXX 104 EL+ KL +A+KE V DD+YSL V Sbjct: 1015 ELIAKLKTAIKEVAVYLMHLSFSCLLAKDKGCEITCLRLQDGDDEYSLLVNLKRLYELQL 1074
Query: 105 XXXXANDSLFVDLAGLLENFNNLEDEVVQLTLLNMFLHVVWCLKSI-DFDNPDEAGMSSL 281 +SL+ D+ +L++ +++DEVV L NM LHV WCL +I + D E +SSL Sbjct: 1075 SRSVPIESLYEDMVMILKSSKSMDDEVVSFLLHNMSLHVAWCLHAIINSDTVSEESLSSL 1134
Query: 282 ISKRDTLLKQLESFAGSTLDSYKQGNARSLLCCTICVILSDLWSFFSKAKLSATKLPSLG 461 +SKR TL +QLE F + + ++G + C +C+IL+ +W F K K S+TKL SLG Sbjct: 1135 LSKRXTLFEQLEHFLHAHTEVQEEGKRANQPACRVCIILAQVWCLFKKTKFSSTKLESLG 1194
Query: 462 VSP 470 P Sbjct: 1195 YCP 1197
>tr|A3B0Q1|A3B0Q1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016623 PE=4 SV=1 Length = 1121
Score = 101 bits (251), Expect = 2e-20 Identities = 55/159 (34%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXA---NDSLFVDLAGLLENFNNL 173 ELVLK+ +A+KE V YS ++ ND LF D+ +L + ++ Sbjct: 639 ELVLKVKTAIKEVEVCMS-YSQSLCFKAMKRFYELQLSKPVKNDGLFEDMYRILSHLKDM 697
Query: 174 EDEVVQLTLLNMFLHVVWCLKSIDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQ 353 ++EV LLNM+L + WCL +ID +NP EA + L+S++ +L ++L + K+ Sbjct: 698 DNEVKSFLLLNMYLQLAWCLNAIDGENPSEASIDELLSRQSSLFEKLYYYLVVLPTYQKE 757
Query: 354 GNARSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 G + ++L C +CVI +++W F K K S+T+L SLG P Sbjct: 758 GRSTTILSCRVCVITAEMWCLFKKPKYSSTRLESLGYLP 796
>tr|Q8LFH0|Q8LFH0_ARATH Putative sister-chromatide cohesion protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 1098
Score = 96.7 bits (239), Expect = 5e-19 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 1/157 (0%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 EL+ K+ SA++E +D+YSL V +S+F ++A L NF NL++E Sbjct: 639 ELLDKITSAIREVKDGNDEYSLLVNLKRLYELQLSKPVLVESMFDEIALTLHNFRNLDEE 698
Query: 183 VVQLTLLNMFLHVVWCLKS-IDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGN 359 V+ LLNM +++ W L S I+ + EA +SSLISKRDTL ++L F +S K GN Sbjct: 699 VICFLLLNMHMYLAWYLHSIINCEAISEASLSSLISKRDTLFEELSYFLNGIEESKKYGN 758
Query: 360 ARSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 L IC IL++ W F K+ + KL LG P Sbjct: 759 Q---LSNRICAILAETWCLFRKSNYDSGKLERLGYCP 792
>tr|O82265|O82265_ARATH Putative putative sister-chromatide cohesion protein (Stromalin protein) OS=Arabidopsis thaliana GN=SA PE=2 SV=2 Length = 1098
Score = 96.7 bits (239), Expect = 5e-19 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 1/157 (0%) Frame = +3
Query: 3 ELVLKLPSALKEAGVVDDDYSLTVXXXXXXXXXXXXXXANDSLFVDLAGLLENFNNLEDE 182 EL+ K+ SA++E +D+YSL V +S+F ++A L NF NL++E Sbjct: 639 ELLDKITSAIREVKDGNDEYSLLVNLKRLYELQLSKPVLVESMFDEIALTLHNFRNLDEE 698
Query: 183 VVQLTLLNMFLHVVWCLKS-IDFDNPDEAGMSSLISKRDTLLKQLESFAGSTLDSYKQGN 359 V+ LLNM +++ W L S I+ + EA +SSLISKRDTL ++L F +S K GN Sbjct: 699 VICFLLLNMHMYLAWYLHSIINCEAISEASLSSLISKRDTLFEELSYFLNGIEESKKYGN 758
Query: 360 ARSLLCCTICVILSDLWSFFSKAKLSATKLPSLGVSP 470 L IC IL++ W F K+ + KL LG P Sbjct: 759 Q---LSNRICAILAETWCLFRKSNYDSGKLERLGYCP 792
>tr|B8NFH2|B8NFH2_ASPFL Putative uncharacterized protein OS=Aspergillus flavus NRRL3357 GN=AFLA_063060 PE=4 SV=1 Length = 706
Score = 37.0 bits (84), Expect = 0.49 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 17/112 (15%) Frame = +3
Query: 144 AGLLENFNNLEDEVVQLTL------LNMFLHVVWCLKSIDFDNPDEAGMSSLISKR---- 293 A LL+ F N +D V + T+ L FL C S FD + G L +R Sbjct: 348 AWLLDKFRNHDDLVAERTIAFSQQALTWFLEFPNCEASFMFDG-GKGGKHELWIRREYGF 406
Query: 294 ---DTLLKQLESFAGSTLDSYKQ----GNARSLLCCTICVILSDLWSFFSKA 428 DT + L++ GST D Q G RS ++ +LWSFFS++ Sbjct: 407 DPNDTSIGSLKTMTGSTGDYSMQSSVPGPGRSFWGMSLVDYKGELWSFFSRS 458
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