DK955652
Clone id TST39A01NGRL0023_K20
Library
Length 340
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_K20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTGTGCTGGGTTTCTTGTGTGATGGTTGGATATGCCACCCATGGGCTTTCAACACAGGGG
ATGCTGCCAAGGATAAAGTTTTGTTTACAGGATGTAGACTAATCAGCTCTCTTTATTCTT
GGCAACTGTGCTTCTCCCCTTGTTTGTACTGTGTATACAATGTCATTTATTGTATTAATT
TTGCAAATAAATCTCTTTCCCTTCAGGTGTATTCGCCATTCTAAGTACATTGCATCAGAC
TTACTGTTCTTATTGAAGCTGTATAGTCCTGATCATTTATTTATCAACAGCATTGGCCGA
CCTTCAAAGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955652|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K20, 5'
(312 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id B0AA80
Definition tr|B0AA80|B0AA80_9CLOT Putative uncharacterized protein OS=Clostridium bartlettii DSM 16795
Align length 63
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955652|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0023_K20, 5'
(312 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0AA80|B0AA80_9CLOT Putative uncharacterized protein OS=Clost... 34 3.2
tr|Q4T758|Q4T758_TETNG Chromosome undetermined SCAF8305, whole g... 33 7.2
tr|B8D232|B8D232_9FIRM Radical SAM domain protein OS=Halothermot... 33 7.2

>tr|B0AA80|B0AA80_9CLOT Putative uncharacterized protein
OS=Clostridium bartlettii DSM 16795 GN=CLOBAR_02035 PE=4
SV=1
Length = 161

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +1

Query: 106 ALFILGNCASPLVCTVYTMSFIVLILQINLFPFRCIRHSKYIASDLLFLLKLYSPDHLFI 285
ALF G+ L T + + F++ ++ + L + + K+ + D + L+ Y P+HLF+
Sbjct: 42 ALFYAGDIIKDLTFTTFLLGFLLALIVMPL-TVKDLEKGKFSSQDSVHKLEKYLPNHLFV 100

Query: 286 NSI 294
SI
Sbjct: 101 FSI 103


>tr|Q4T758|Q4T758_TETNG Chromosome undetermined SCAF8305, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00005914001 PE=3 SV=1
Length = 343

Score = 33.1 bits (74), Expect = 7.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3

Query: 120 WQLCFSPCLYCVYNVIYCINFANKSLSLQVYSPF*VHC 233
W F P + C+ Y ++F+N S S++V +P VHC
Sbjct: 288 WGYTFLPIISCIQTGKYRVDFSNFSKSVRVSTPHCVHC 325


>tr|B8D232|B8D232_9FIRM Radical SAM domain protein
OS=Halothermothrix orenii H 168 GN=Hore_05010 PE=4 SV=1
Length = 415

Score = 33.1 bits (74), Expect = 7.2
Identities = 18/71 (25%), Positives = 29/71 (40%)
Frame = +3

Query: 6 LGFLCDGWICHPWAFNTGDAAKDKVLFTGCRLISSLYSWQLCFSPCLYCVYNVIYCINFA 185
+G G ICH W+ + + K+LFT YC+Y+ YCIN
Sbjct: 34 MGNTASGGICHSWSDDGRCISLLKILFTN------------------YCIYDCAYCINRI 75

Query: 186 NKSLSLQVYSP 218
+ + ++P
Sbjct: 76 SNDIPRASFTP 86