DK955630 |
Clone id |
TST39A01NGRL0023_J22 |
Library |
TST39 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_J22. 5' end sequence. |
Accession |
DK955630 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGCCTTTGCGTACAGATTCCACCTTGGCTTCCTCATGTCGAGAGCTCCTCGCCATTTCTG TATTTGCCCCAATTCTACACTCGCAGCTCCATAGCCGGCCTTCAATTCCTGCTCGACACT CTCTTTTTCTGTGGGGAAGTCAGCCTCGATCTTCCCCTTCTCCATGGCTACTCCCCCCCA TGCGATCCTCCATCGATCCTCCATCCTTCCATCAGGCCTTCCTCCTGCCGCTGATGAGCT TCTACAGCGGATGCTCCTCATGGCAACCGATTTTGTCGGCTCCCCTGCAGGTCTGCATTA TCAACATCGCGAGAGACATACAGGTAAAACCCTCAGAACCCCCAAGTTGTCGGTACTAGG GTTTGCATCCCTGCTTTTAGGCATCTCCTCCACCTTGATGCTGTTTGGTTCCTTTGCTTT CTTGTTGGGCTTCATGCTCATGCCCCTCATTTTACCTACCAGCATCGTTGTATGCGTAAC TGCACAGTTTCCAGCTTTCAAGGAAGGTCGCTCCCTTTGCTCGGTATCATCCATGTCAAT GTGGGGCAGTAAGATTTTGCAGCAAGAAGCAAGGTGTTAGCTATGGATTGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05755 |
Definition |
sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense |
Align length |
83 |
Score (bit) |
32.0 |
E-value |
2.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B5TV75 |
Definition |
tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camellia sinensis |
Align length |
74 |
Score (bit) |
55.5 |
E-value |
2.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955630|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_J22, 5' (592 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camel... 55 2e-06 tr|A7QP35|A7QP35_VITVI Chromosome chr1 scaffold_136, whole genom... 54 9e-06 tr|A9PJ93|A9PJ93_POPJC Putative uncharacterized protein OS=Popul... 53 1e-05 tr|A9PFD3|A9PFD3_POPTR Putative uncharacterized protein OS=Popul... 53 1e-05 tr|A9NMY2|A9NMY2_PICSI Putative uncharacterized protein OS=Picea... 52 3e-05 tr|Q9FZK6|Q9FZK6_ARATH F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1 49 2e-04 tr|Q94F23|Q94F23_ARATH Putative uncharacterized protein F17L21.8... 49 2e-04 tr|A9NXB6|A9NXB6_PICSI Putative uncharacterized protein OS=Picea... 44 0.005 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein OS=Oryza sativa subs... 42 0.034 tr|B8BDB8|B8BDB8_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.034 tr|Q8RYH1|Q8RYH1_ORYSJ cDNA clone:J023064M05, full insert sequen... 41 0.045 tr|A3A119|A3A119_ORYSJ Putative uncharacterized protein OS=Oryza... 41 0.045 tr|B6TAH5|B6TAH5_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077 tr|B6TAE9|B6TAE9_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077 tr|B6SQ42|B6SQ42_MAIZE Putative uncharacterized protein OS=Zea m... 40 0.077 tr|A2WYI0|A2WYI0_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.077 tr|B0D1X1|B0D1X1_LACBS Predicted protein OS=Laccaria bicolor (st... 39 0.29 tr|A3C0G7|A3C0G7_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.38 tr|A8ICH4|A8ICH4_CHLRE Predicted protein OS=Chlamydomonas reinha... 37 0.65 tr|A8H2G4|A8H2G4_SHEPA Polysaccharide biosynthesis protein OS=Sh... 37 0.85 tr|B3MXQ9|B3MXQ9_DROAN GF19392 OS=Drosophila ananassae GN=GF1939... 37 1.1 tr|B6TN46|B6TN46_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.4 tr|B0DH81|B0DH81_LACBS Predicted protein OS=Laccaria bicolor (st... 35 4.2 tr|A8WVN6|A8WVN6_CAEBR Putative uncharacterized protein (Fragmen... 34 5.5 tr|A2SPE5|A2SPE5_METLZ Putative uncharacterized protein OS=Metha... 34 5.5 tr|A2VV23|A2VV23_9BURK Metallophosphoesterase OS=Burkholderia ce... 34 7.1 tr|A3URT6|A3URT6_VIBSP RfbJ protein OS=Vibrio splendidus 12B01 G... 34 7.2 tr|Q667M9|Q667M9_YERPS Putative Nucleobase:Cation symporter, NCS... 33 9.2 tr|Q1CFI8|Q1CFI8_YERPN Permease OS=Yersinia pestis bv. Antiqua (... 33 9.2 tr|Q1CAJ3|Q1CAJ3_YERPA Putative permease OS=Yersinia pestis bv. ... 33 9.2
>tr|B5TV75|B5TV75_CAMSI Putative uncharacterized protein OS=Camellia sinensis PE=2 SV=1 Length = 129
Score = 55.5 bits (132), Expect = 2e-06 Identities = 36/74 (48%), Positives = 41/74 (55%) Frame = +2
Query: 338 TPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSL 517 TP +S GFASLLLGIS LML GS F +GFMLMP +L +V V Sbjct: 49 TPPISPAGFASLLLGISLALMLCGSVTFFIGFMLMPWVLGLVMVFYVVG----------- 97
Query: 518 CSVSSMSMWGSKIL 559 VSS+SM G IL Sbjct: 98 -IVSSLSMIGRAIL 110
>tr|A7QP35|A7QP35_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002783001 PE=4 SV=1 Length = 127
Score = 53.5 bits (127), Expect = 9e-06 Identities = 29/58 (50%), Positives = 36/58 (62%) Frame = +2
Query: 281 SPAGLHYQHRERHTGKTLRTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLIL 454 SPA E +T + T ++S GFASLLLGIS LML GS F +GF+LMP +L Sbjct: 28 SPAPFSEHSPEVYTSRRPTTTQISPAGFASLLLGISLALMLCGSVTFFIGFILMPWVL 85
>tr|A9PJ93|A9PJ93_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 129
Score = 52.8 bits (125), Expect = 1e-05 Identities = 32/75 (42%), Positives = 43/75 (57%) Frame = +2
Query: 335 RTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRS 514 R P+++ GFASLLLG+S TLML GS F +GF+LMP +L +V V Sbjct: 47 RLPEITPAGFASLLLGMSLTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAG---------- 96
Query: 515 LCSVSSMSMWGSKIL 559 VS++SM G +L Sbjct: 97 --IVSTISMLGRSLL 109
>tr|A9PFD3|A9PFD3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 129
Score = 52.8 bits (125), Expect = 1e-05 Identities = 32/75 (42%), Positives = 43/75 (57%) Frame = +2
Query: 335 RTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRS 514 R P+++ GFASLLLG+S TLML GS F +GF+LMP +L +V V Sbjct: 47 RLPEITPAGFASLLLGMSLTLMLCGSVTFFIGFLLMPWVLGLVMVFYVAG---------- 96
Query: 515 LCSVSSMSMWGSKIL 559 VS++SM G +L Sbjct: 97 --IVSTISMLGRSLL 109
>tr|A9NMY2|A9NMY2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 133
Score = 52.0 bits (123), Expect = 3e-05 Identities = 25/51 (49%), Positives = 36/51 (70%) Frame = +2
Query: 332 LRTPKLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTA 484 +R ++ +GFASLL GI+STLM GS AF++G M+MPL+ ++V V A Sbjct: 49 VRKSHMTPVGFASLLFGIASTLMFIGSTAFMIGVMMMPLVAMVAMVFSVIA 99
>tr|Q9FZK6|Q9FZK6_ARATH F17L21.8 OS=Arabidopsis thaliana PE=4 SV=1 Length = 142
Score = 49.3 bits (116), Expect = 2e-04 Identities = 32/71 (45%), Positives = 39/71 (54%) Frame = +2
Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSLCSV 526 +S GFASLLLGIS LML GS F +GF+LMP +L +V V V Sbjct: 63 ISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAG------------IV 110
Query: 527 SSMSMWGSKIL 559 S++SM G IL Sbjct: 111 SAISMVGRSIL 121
>tr|Q94F23|Q94F23_ARATH Putative uncharacterized protein F17L21.8 (Putative uncharacterized protein At1g27290; F17L21.8) OS=Arabidopsis thaliana GN=At1g27290/F17L21.8 PE=2 SV=1 Length = 142
Score = 49.3 bits (116), Expect = 2e-04 Identities = 32/71 (45%), Positives = 39/71 (54%) Frame = +2
Query: 347 LSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIVVCVTAQFPAFKEGRSLCSV 526 +S GFASLLLGIS LML GS F +GF+LMP +L +V V V Sbjct: 64 ISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAG------------IV 111
Query: 527 SSMSMWGSKIL 559 S++SM G IL Sbjct: 112 SAISMVGRSIL 122
>tr|A9NXB6|A9NXB6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 128
Score = 44.3 bits (103), Expect = 0.005 Identities = 26/83 (31%), Positives = 42/83 (50%) Frame = +2
Query: 221 PPAADELLQRMLLMATDFVGSPAGLHYQHRERHTGKTLRTPKLSVLGFASLLLGISSTLM 400 P AD+L + + L+ + P + H L+ +G LL GI+S LM Sbjct: 18 PHQADDLFRDLGLLLFSILDCPISTNLSFVRTH---------LTPVGLTWLLFGIASALM 68
Query: 401 LFGSFAFLLGFMLMPLILPTSIV 469 L GS AF++G M+MP++ ++V Sbjct: 69 LVGSVAFMIGIMMMPVVAIVAMV 91
>tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2 SV=1 Length = 124
Score = 41.6 bits (96), Expect = 0.034 Identities = 20/42 (47%), Positives = 28/42 (66%) Frame = +2
Query: 344 KLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIV 469 +++ G AS+LLG S LML GS F+LGF LMP ++ + V Sbjct: 49 QVTAAGVASMLLGASVALMLCGSVTFMLGFFLMPWVIGLACV 90
>tr|B8BDB8|B8BDB8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31968 PE=4 SV=1 Length = 139
Score = 41.6 bits (96), Expect = 0.034 Identities = 20/42 (47%), Positives = 28/42 (66%) Frame = +2
Query: 344 KLSVLGFASLLLGISSTLMLFGSFAFLLGFMLMPLILPTSIV 469 +++ G AS+LLG S LML GS F+LGF LMP ++ + V Sbjct: 49 QVTAAGVASMLLGASVALMLCGSVTFMLGFFLMPWVIGLACV 90
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