DK955400 |
Clone id |
TST39A01NGRL0022_P23 |
Library |
TST39 |
Length |
609 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_P23. 5' end sequence. |
Accession |
DK955400 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTAGCAGGAGGATTCCATTAGCATATCGAGCCTACTGAATGCAGAGGAGCGATGCCGCCC AAGCAAGGAGCCCCCGCAAAGCCCAAGTCTAAAACTCAAGCGCCCACTCCCGTCGCTCCA GCGAAGCCTTCGATTGAAGATCTCTACTCGTCTTTGGATCGATGCGTCCAAACCAACGAT TACAGGCAAATCGTGAAGATTTCCGATCAAATTCTTGCTGATGCTCCTGAGGAGCTGAAT GCTCTTCTCTGCAAAGTGGTTGCTCTCATACAAGATGACAAAGTGGATGATGCACTTTCT ACTCTTAACTCGAGCGCAACATCAGATAACTCGTTAAATTTCCATAAGGGTTAGAAAAGA ATGAAGGAGTACTCCAACTTGAGGCTCAAATCTTGTACAGACAAGGTGAATTCAATGCAT GCATAGCCAGCTACCAAGCCCTCTCACAAAAGTTTGGTATGGATTCAACGGAGCTGAAGA CAAACCTAATTGCATCCTATATTTCTGGTGGAAAGTCTGATGAGGTTTCTTCATTAATGG AGAGCCTGAAAGTTACTCCTCGCAGCAGTCTTGAGTTAGCTTACAATGCTGCATGTGCAT TGATTGAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33731 |
Definition |
sp|P33731|SRP72_CANFA Signal recognition particle 72 kDa protein OS=Canis familiaris |
Align length |
75 |
Score (bit) |
47.8 |
E-value |
3.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955400|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_P23, 5' (609 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P33731|SRP72_CANFA Signal recognition particle 72 kDa protein... 48 3e-11 sp|O76094|SRP72_HUMAN Signal recognition particle 72 kDa protein... 48 7e-11 sp|Q54EP7|SRP72_DICDI Signal recognition particle 72 kDa protein... 55 3e-07 sp|P49965|SRP72_SCHMA Signal recognition particle 72 kDa protein... 54 5e-07 sp|P91240|SRP72_CAEEL Signal recognition particle 72 kDa protein... 32 2e-04 sp|P0C1S5|ISDA_STAAU Iron-regulated surface determinant protein ... 35 0.23 sp|Q6GHV6|ISDA_STAAR Iron-regulated surface determinant protein ... 35 0.23 sp|P25655|NOT1_YEAST General negative regulator of transcription... 33 1.5 sp|A9WPV8|IF2_RENSM Translation initiation factor IF-2 OS=Reniba... 33 1.5 sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-rich pr... 32 2.0 sp|P19706|MYSB_ACACA Myosin heavy chain IB OS=Acanthamoeba caste... 32 2.0 sp|Q8GYM2|PP393_ARATH Pentatricopeptide repeat-containing protei... 32 2.5 sp|Q55BR6|ORC3_DICDI Origin recognition complex subunit 3 OS=Dic... 32 2.6 sp|A9MIF9|ZIPA_SALAR Cell division protein zipA homolog OS=Salmo... 32 3.3 sp|P22670|RFX1_HUMAN MHC class II regulatory factor RFX1 OS=Homo... 32 3.3 sp|Q9NWA0|MED9_HUMAN Mediator of RNA polymerase II transcription... 31 4.4 sp|Q9W1X7|MED23_DROME Mediator of RNA polymerase II transcriptio... 31 4.4 sp|Q7A152|ISDA_STAAW Iron-regulated surface determinant protein ... 31 4.4 sp|A8Z1R0|ISDA_STAAT Iron-regulated surface determinant protein ... 31 4.4 sp|Q6GA85|ISDA_STAAS Iron-regulated surface determinant protein ... 31 4.4 sp|Q7A655|ISDA_STAAN Iron-regulated surface determinant protein ... 31 4.4 sp|Q99UX4|ISDA_STAAM Iron-regulated surface determinant protein ... 31 4.4 sp|A6QG31|ISDA_STAAE Iron-regulated surface determinant protein ... 31 4.4 sp|Q5HGV4|ISDA_STAAC Iron-regulated surface determinant protein ... 31 4.4 sp|A5IS16|ISDA_STAA9 Iron-regulated surface determinant protein ... 31 4.4 sp|Q2FZE9|ISDA_STAA8 Iron-regulated surface determinant protein ... 31 4.4 sp|Q2FHV1|ISDA_STAA3 Iron-regulated surface determinant protein ... 31 4.4 sp|A6U0U7|ISDA_STAA2 Iron-regulated surface determinant protein ... 31 4.4 sp|A7X148|ISDA_STAA1 Iron-regulated surface determinant protein ... 31 4.4 sp|Q8NP40|IF2_CORGL Translation initiation factor IF-2 OS=Coryne... 31 4.4
>sp|P33731|SRP72_CANFA Signal recognition particle 72 kDa protein OS=Canis familiaris GN=SRP72 PE=1 SV=3 Length = 671
Score = 47.8 bits (112), Expect(2) = 3e-11 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Frame = +1
Query: 130 SIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDALSTLN 309 S+ L+S ++R Q D+ + +K ++IL +++ AL CKVV LIQ+ +AL+ +N Sbjct: 10 SVPALWSEVNRYGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVIN 69
Query: 310 --SSATSDNSLNFHK 348 + ++NSL+F K Sbjct: 70 THTKVLANNSLSFEK 84
Score = 40.4 bits (93), Expect(2) = 3e-11 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +3
Query: 354 EKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMD-STELKTNLIASYISGGKSDEVS 530 ++ + + +L Q+LYR ++ C+A Y+ L + D E KTNL S + +S+ Sbjct: 106 QQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNL--SAVVAAQSNWEK 163
Query: 531 SLMESLKVTPRSSLELAYNAACALI 605 + E+L + + EL YNAACALI Sbjct: 164 VVPENLGL-QEGTHELCYNAACALI 187
>sp|O76094|SRP72_HUMAN Signal recognition particle 72 kDa protein OS=Homo sapiens GN=SRP72 PE=1 SV=3 Length = 671
Score = 47.8 bits (112), Expect(2) = 7e-11 Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Frame = +1
Query: 130 SIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDALSTLN 309 S+ L+S ++R Q D+ + +K ++IL +++ AL CKVV LIQ+ +AL+ +N Sbjct: 10 SVPALWSEVNRYGQNGDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVIN 69
Query: 310 --SSATSDNSLNFHK 348 + ++NSL+F K Sbjct: 70 THTKVLANNSLSFEK 84
Score = 38.9 bits (89), Expect(2) = 7e-11 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 1/85 (1%) Frame = +3
Query: 354 EKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMD-STELKTNLIASYISGGKSDEVS 530 ++ + + +L Q+LYR ++ C+A Y+ L + D E KTNL S + +S+ Sbjct: 106 QQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNL--SAVVAAQSNWEK 163
Query: 531 SLMESLKVTPRSSLELAYNAACALI 605 + E+L + + EL YN ACALI Sbjct: 164 VVPENLGL-QEGTHELCYNTACALI 187
>sp|Q54EP7|SRP72_DICDI Signal recognition particle 72 kDa protein homolog OS=Dictyostelium discoideum GN=srp72 PE=3 SV=1 Length = 672
Score = 55.1 bits (131), Expect = 3e-07 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Frame = +3
Query: 372 LQLEAQILYRQGEFNACIASYQALSQKFGM-DSTELKTNLIASYISGGKSDEVSSLMESL 548 L+LEAQI Y+ + I+ Y++L K G DS E TNL A Y+ GK +E L+ Sbjct: 107 LELEAQIYYKLENYQKTISIYESLLSKPGYSDSIEFITNLCAVYLDAGKFNECQELLNKN 166
Query: 549 KVTPRSSLELAYNAACALI 605 K + ELA+N+AC I Sbjct: 167 KSQQTKTHELAFNSACLAI 185
>sp|P49965|SRP72_SCHMA Signal recognition particle 72 kDa protein OS=Schistosoma mansoni GN=SRP72 PE=3 SV=1 Length = 707
Score = 54.3 bits (129), Expect = 5e-07 Identities = 31/98 (31%), Positives = 49/98 (50%) Frame = +1
Query: 130 SIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDALSTLN 309 +++ YS L++ Y +I+ IS +IL P E A CKVVALI+ +K +D LS L Sbjct: 8 NLQSAYSDLNKACSAQAYDKIINISGKILTKFPGETKAFQCKVVALIRAEKYEDCLSFLK 67
Query: 310 SSATSDNSLNFHKG*KRMKEYSNLRLKSCTDKVNSMHA 423 + T + + F K Y RL T+ ++ + Sbjct: 68 KNPTLSSHVIFEKA------YVEYRLNRLTEAAKTLES 99
>sp|P91240|SRP72_CAEEL Signal recognition particle 72 kDa protein homolog OS=Caenorhabditis elegans GN=F08D12.1 PE=2 SV=2 Length = 635
Score = 32.3 bits (72), Expect(2) = 2e-04 Identities = 23/79 (29%), Positives = 39/79 (49%) Frame = +3
Query: 372 LQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEVSSLMESLK 551 L+L+AQ+ Y+Q + Y L + DS EL+ A++++ E + +++ Sbjct: 109 LELKAQVFYKQENYQQAYDIYLYLLKNHSDDSDELRR---ANFLAVQARLEAQGVKQAVA 165
Query: 552 VTPRSSLELAYNAACALIE 608 T S +L YN AC IE Sbjct: 166 ETEDSYSQL-YNRACVEIE 183
Score = 32.0 bits (71), Expect(2) = 2e-04 Identities = 15/56 (26%), Positives = 31/56 (55%) Frame = +1
Query: 148 SSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDALSTLNSS 315 + + R + DY++ + +++++ P+E A CK+VA IQ + DAL + + Sbjct: 14 TDISRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYADALELIRKT 69
>sp|P0C1S5|ISDA_STAAU Iron-regulated surface determinant protein A OS=Staphylococcus aureus GN=isdA PE=1 SV=1 Length = 354
Score = 35.4 bits (80), Expect = 0.23 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 13/113 (11%) Frame = +1
Query: 31 PTECRGAMP----PKQGAPAKPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVK 198 PT A P P Q PA+PK+ T+ PV P ++ ++ + N+ RQ K Sbjct: 181 PTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEKVKPAVTAPSK----NENRQTTK 236
Query: 199 -ISDQILADAPEELNALLCKVVALIQDDK--------VDDALSTLNSSATSDN 330 +S + D + +A K QD V A S N+ A SDN Sbjct: 237 VVSSEATKDQSQTQSARTVKTTQTAQDQNKVQTPVKDVATAKSESNNQAVSDN 289
>sp|Q6GHV6|ISDA_STAAR Iron-regulated surface determinant protein A OS=Staphylococcus aureus (strain MRSA252) GN=isdA PE=2 SV=1 Length = 354
Score = 35.4 bits (80), Expect = 0.23 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 13/113 (11%) Frame = +1
Query: 31 PTECRGAMP----PKQGAPAKPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVK 198 PT A P P Q PA+PK+ T+ PV P ++ ++ + N+ RQ K Sbjct: 181 PTLADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEKVKPAVTAPSK----NENRQTTK 236
Query: 199 -ISDQILADAPEELNALLCKVVALIQDDK--------VDDALSTLNSSATSDN 330 +S + D + +A K QD V A S N+ A SDN Sbjct: 237 VVSSEATKDQSQTQSARTVKTTQTAQDQNKVQTPVKDVATAKSESNNQAVSDN 289
>sp|P25655|NOT1_YEAST General negative regulator of transcription subunit 1 OS=Saccharomyces cerevisiae GN=NOT1 PE=1 SV=2 Length = 2108
Score = 32.7 bits (73), Expect = 1.5 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Frame = +1
Query: 124 KPSIEDLYSSLDRCVQTNDYRQIVK-----ISDQILADAPEELNALLCKVVALIQDDKVD 288 K + +D+ SLDR Q ND++ I + + L PE L + L ++ ++ + ++ Sbjct: 139 KSANKDIIESLDRSSQINDFKTIKMNHTNYLRNFFLQTTPETLESNLRDLLHSLEGESLN 198
Query: 289 DALSTLNSSATSDNSLN 339 D L+ L S S S N Sbjct: 199 DLLALLLSEILSPGSQN 215
>sp|A9WPV8|IF2_RENSM Translation initiation factor IF-2 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=infB PE=3 SV=1 Length = 956
Score = 32.7 bits (73), Expect = 1.5 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +1
Query: 28 EPTECRGAMPPKQG-APAKPKSKTQAPTPVAPAKPSIED 141 +P E + ++ P + APA P + A TPVAPA P++++ Sbjct: 87 KPAEAQASVKPVETQAPATPAAAKAAATPVAPAAPAVKE 125
>sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-rich protein kinase OS=Homo sapiens GN=STK39 PE=1 SV=2 Length = 547
Score = 32.3 bits (72), Expect = 2.0 Identities = 21/69 (30%), Positives = 30/69 (43%) Frame = +1
Query: 49 AMPPKQGAPAKPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAP 228 A P A A P + T AP P APA P+ + + V R ++ + I + A Sbjct: 17 AAPVTAAAAAAPAAATAAPAPAAPAAPAPAPAPAPAAQAVGWPICRDAYELQEVIGSGAT 76
Query: 229 EELNALLCK 255 + A LCK Sbjct: 77 AVVQAALCK 85
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9THX6 |
Definition |
tr|A9THX6|A9THX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
87 |
Score (bit) |
107.0 |
E-value |
1.0e-41 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955400|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_P23, 5' (609 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9THX6|A9THX6_PHYPA Predicted protein OS=Physcomitrella paten... 107 1e-41 tr|Q9FXD4|Q9FXD4_ARATH F12A21.17 (Putative uncharacterized prote... 84 2e-31 tr|A5BSZ0|A5BSZ0_VITVI Putative uncharacterized protein OS=Vitis... 77 3e-28 tr|A7QBT9|A7QBT9_VITVI Chromosome chr1 scaffold_75, whole genome... 77 3e-28 tr|Q5N842|Q5N842_ORYSJ Putative signal recognition particle 72 (... 79 2e-26 tr|A2WXS7|A2WXS7_ORYSI Putative uncharacterized protein OS=Oryza... 79 2e-26 tr|A3A0D4|A3A0D4_ORYSJ Putative uncharacterized protein OS=Oryza... 79 4e-26 tr|Q9FXD1|Q9FXD1_ARATH F12A21.20 OS=Arabidopsis thaliana GN=At1g... 68 4e-24 tr|A8JH66|A8JH66_CHLRE Subunit of the signal recognition particl... 84 2e-23 tr|A0PJ97|A0PJ97_MOUSE Srp72 protein (Fragment) OS=Mus musculus ... 48 2e-10 tr|A0JLN1|A0JLN1_MOUSE Srp72 protein (Fragment) OS=Mus musculus ... 48 2e-10 tr|Q3UZL8|Q3UZL8_MOUSE Putative uncharacterized protein (Fragmen... 48 2e-10 tr|Q3UU23|Q3UU23_MOUSE Putative uncharacterized protein (Fragmen... 48 2e-10 tr|Q4S3T3|Q4S3T3_TETNG Chromosome 20 SCAF14744, whole genome sho... 49 4e-10 tr|Q71V07|Q71V07_HUMAN Putative signal recognition particle OS=H... 48 8e-10 tr|Q0D2M6|Q0D2M6_HUMAN SRP72 protein (Fragment) OS=Homo sapiens ... 48 8e-10 tr|Q86X80|Q86X80_HUMAN SRP72 protein (Fragment) OS=Homo sapiens ... 48 8e-10 tr|A0PJJ5|A0PJJ5_HUMAN SRP72 protein (Fragment) OS=Homo sapiens ... 48 8e-10 tr|Q7Z3C0|Q7Z3C0_HUMAN Putative uncharacterized protein DKFZp686... 46 2e-09 tr|Q5ZKZ5|Q5ZKZ5_CHICK Putative uncharacterized protein OS=Gallu... 46 4e-09 tr|Q6GNA6|Q6GNA6_XENLA MGC82921 protein OS=Xenopus laevis GN=srp... 45 6e-09 tr|B3S385|B3S385_TRIAD Putative uncharacterized protein OS=Trich... 49 2e-08 tr|Q84WF7|Q84WF7_ARATH Putative uncharacterized protein At1g6765... 61 6e-08 tr|B1H3C4|B1H3C4_XENTR LOC496794 protein OS=Xenopus tropicalis G... 41 8e-08 tr|Q28G76|Q28G76_XENTR Signal recognition particle 72kDa (Fragme... 41 8e-08 tr|A7RLD9|A7RLD9_NEMVE Predicted protein OS=Nematostella vectens... 59 2e-07 tr|Q5BXQ2|Q5BXQ2_SCHJA SJCHGC05887 protein (Fragment) OS=Schisto... 54 9e-06 tr|B4NFV7|B4NFV7_DROWI GK22456 OS=Drosophila willistoni GN=GK224... 41 2e-05 tr|B3NYW7|B3NYW7_DROER GG23989 OS=Drosophila erecta GN=GG23989 P... 41 2e-05 tr|B4PPQ1|B4PPQ1_DROYA GE25672 OS=Drosophila yakuba GN=GE25672 P... 40 3e-05
>tr|A9THX6|A9THX6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_195231 PE=4 SV=1 Length = 692
Score = 107 bits (266), Expect(2) = 1e-41 Identities = 50/87 (57%), Positives = 70/87 (80%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 GLE+N VLQLEAQILYR G++ CI+SY+ L ++ + + +LKTN++A+Y+ GG++ EV Sbjct: 122 GLERNVNVLQLEAQILYRNGDWEECISSYETLFKQHKVVANDLKTNIVAAYVVGGRAAEV 181
Query: 528 SSLMESLKVTPRSSLELAYNAACALIE 608 SLME+LKV PRS E+A+NAACAL+E Sbjct: 182 PSLMETLKVHPRSGFEIAHNAACALVE 208
Score = 86.7 bits (213), Expect(2) = 1e-41 Identities = 45/99 (45%), Positives = 65/99 (65%) Frame = +1
Query: 52 MPPKQGAPAKPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPE 231 +PP +G PA PK K Q V P P++EDL+++LD+ V+ +D+R IVK+SDQILA P Sbjct: 9 LPPAKGKPA-PKEKEQV---VEPTGPTVEDLFATLDKAVKADDFRNIVKVSDQILAKEPN 64
Query: 232 ELNALLCKVVALIQDDKVDDALSTLNSSATSDNSLNFHK 348 + A CKVVALIQ++++ AL + S+ + L F K Sbjct: 65 CVEAKHCKVVALIQENEISQALQVIESTRIAGLDLTFQK 103
>tr|Q9FXD4|Q9FXD4_ARATH F12A21.17 (Putative uncharacterized protein At1g67680) OS=Arabidopsis thaliana GN=At1g67680 PE=2 SV=1 Length = 664
Score = 84.0 bits (206), Expect(2) = 2e-31 Identities = 44/87 (50%), Positives = 58/87 (66%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 GLE++ L LEAQILYR G+ +AC+ YQ L++ L+ NL+A IS GK+ +V Sbjct: 120 GLERDTDTLVLEAQILYRLGKADACVDVYQKLTKS---QIETLEVNLVAGLISAGKASQV 176
Query: 528 SSLMESLKVTPRSSLELAYNAACALIE 608 +ESLK+ P SS ELAYN AC+LIE Sbjct: 177 QKTLESLKIKPTSSFELAYNTACSLIE 203
Score = 75.5 bits (184), Expect(2) = 2e-31 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 10/99 (10%) Frame = +1
Query: 82 PKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVV 261 PKSK ++ T + P+IEDL++SL + ++ Y + VK++DQ+L+ P + +A+ CKVV Sbjct: 3 PKSKEKSKTSNSQPPPAIEDLFTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVV 62
Query: 262 ALIQDDKVDD----------ALSTLNSSATSDNSLNFHK 348 ALI+DDK DD ALS +NS L FHK Sbjct: 63 ALIKDDKFDDYLIKDVKINGALSVINSFQKLPIDLGFHK 101
>tr|A5BSZ0|A5BSZ0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028102 PE=4 SV=1 Length = 1085
Score = 77.0 bits (188), Expect(2) = 3e-28 Identities = 41/90 (45%), Positives = 61/90 (67%) Frame = +1
Query: 79 KPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKV 258 KPK K A + P P IEDL++SL+ +Q + + Q VK++DQIL AP + +A+ CKV Sbjct: 426 KPKPKPTASSSSQPPPP-IEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKV 484
Query: 259 VALIQDDKVDDALSTLNSSATSDNSLNFHK 348 VALI++D+++DALST+ +S L+F K Sbjct: 485 VALIKEDRINDALSTIQASQRLPIDLSFFK 514
Score = 71.6 bits (174), Expect(2) = 3e-28 Identities = 39/85 (45%), Positives = 56/85 (65%) Frame = +3
Query: 354 EKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEVSS 533 E + + LE+QILYR G+ +ACI YQ L QK ++S E+ NL+A +S G+ +V Sbjct: 535 EGSSTAMLLESQILYRLGKMDACIDIYQKL-QKSKIESLEI--NLVAGLVSAGRGSDVQG 591
Query: 534 LMESLKVTPRSSLELAYNAACALIE 608 +++L+V SS ELAYN AC+LIE Sbjct: 592 TLDALRVKATSSFELAYNTACSLIE 616
>tr|A7QBT9|A7QBT9_VITVI Chromosome chr1 scaffold_75, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035105001 PE=4 SV=1 Length = 673
Score = 77.0 bits (188), Expect(2) = 3e-28 Identities = 41/90 (45%), Positives = 61/90 (67%) Frame = +1
Query: 79 KPKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKV 258 KPK K A + P P IEDL++SL+ +Q + + Q VK++DQIL AP + +A+ CKV Sbjct: 4 KPKPKPTASSSSQPPPP-IEDLFTSLNLHIQRSQFDQAVKVADQILLVAPSDEDAIRCKV 62
Query: 259 VALIQDDKVDDALSTLNSSATSDNSLNFHK 348 VALI++D+++DALST+ +S L+F K Sbjct: 63 VALIKEDRINDALSTIQASQRLPIDLSFFK 92
Score = 71.6 bits (174), Expect(2) = 3e-28 Identities = 39/85 (45%), Positives = 56/85 (65%) Frame = +3
Query: 354 EKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEVSS 533 E + + LE+QILYR G+ +ACI YQ L QK ++S E+ NL+A +S G+ +V Sbjct: 113 EGSSTAMLLESQILYRLGKMDACIDIYQKL-QKSKIESLEI--NLVAGLVSAGRGSDVQG 169
Query: 534 LMESLKVTPRSSLELAYNAACALIE 608 +++L+V SS ELAYN AC+LIE Sbjct: 170 TLDALRVKATSSFELAYNTACSLIE 194
>tr|Q5N842|Q5N842_ORYSJ Putative signal recognition particle 72 (Os01g0889000 protein) OS=Oryza sativa subsp. japonica GN=B1099D03.37 PE=4 SV=1 Length = 669
Score = 79.0 bits (193), Expect(2) = 2e-26 Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 7/94 (7%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 G E+ +LQLE+QI YR G N C+ SY+ L QKF ++S +LK N+IA+ ++ G++ EV Sbjct: 112 GQEETSAILQLESQIYYRLGRMNDCMNSYEKL-QKFKVESMDLKINIIAALVAAGRASEV 170
Query: 528 SSLMESLKVTPRS-------SLELAYNAACALIE 608 + M++ KV S S ELAYN+AC+LIE Sbjct: 171 QATMKAQKVDLSSRALRDTRSFELAYNSACSLIE 204
Score = 63.9 bits (154), Expect(2) = 2e-26 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +1
Query: 52 MPPKQGAPAKPKSKTQAPTPVAPAKP-SIEDLYSSLDRCVQTNDYRQIVKISDQILADAP 228 MPPK A A A A A+P ++EDL+++L R ++ ++ Q VK++DQ+LA AP Sbjct: 1 MPPKSKAAA-------AAAAAAAAQPVAVEDLFTTLHRHIEAGEFPQAVKVADQVLAAAP 53
Query: 229 EELNALLCKVVALIQDDKVDDALSTLNSSATSDNSLNFHK 348 + +A+ CKVVA I+ D ++ AL+ + ++ L++ K Sbjct: 54 GDEDAVRCKVVAHIKSDAIEKALAAIRAAERLPIDLSYCK 93
>tr|A2WXS7|A2WXS7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04729 PE=4 SV=1 Length = 670
Score = 79.0 bits (193), Expect(2) = 2e-26 Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 7/94 (7%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 G E+ +LQLE+QI YR G N C+ SY+ L QKF ++S +LK N+IA+ ++ G++ EV Sbjct: 112 GQEETSAILQLESQIYYRLGRMNDCMNSYEKL-QKFKVESMDLKINIIAALVAAGRASEV 170
Query: 528 SSLMESLKVTPRS-------SLELAYNAACALIE 608 + M++ KV S S ELAYN+AC+LIE Sbjct: 171 QATMKAQKVDLSSRALRDTRSFELAYNSACSLIE 204
Score = 63.9 bits (154), Expect(2) = 2e-26 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 1/100 (1%) Frame = +1
Query: 52 MPPKQGAPAKPKSKTQAPTPVAPAKP-SIEDLYSSLDRCVQTNDYRQIVKISDQILADAP 228 MPPK A A A A A+P ++EDL+++L R ++ ++ Q VK++DQ+LA AP Sbjct: 1 MPPKSKAAA-------AAAAAAAAQPVAVEDLFTTLHRHIEAGEFPQAVKVADQVLAAAP 53
Query: 229 EELNALLCKVVALIQDDKVDDALSTLNSSATSDNSLNFHK 348 + +A+ CKVVA I+ D ++ AL+ + ++ L++ K Sbjct: 54 GDEDAVRCKVVAHIKSDAIEKALAAIRAAERLPIDLSYCK 93
>tr|A3A0D4|A3A0D4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004256 PE=4 SV=1 Length = 669
Score = 79.0 bits (193), Expect(2) = 4e-26 Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 7/94 (7%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 G E+ +LQLE+QI YR G N C+ SY+ L QKF ++S +LK N+IA+ ++ G++ EV Sbjct: 112 GQEETSAILQLESQIYYRLGRMNDCMNSYEKL-QKFKVESMDLKINIIAALVAAGRASEV 170
Query: 528 SSLMESLKVTPRS-------SLELAYNAACALIE 608 + M++ KV S S ELAYN+AC+LIE Sbjct: 171 QATMKAQKVDLSSRALRDTRSFELAYNSACSLIE 204
Score = 62.8 bits (151), Expect(2) = 4e-26 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 2/91 (2%) Frame = +1
Query: 82 PKSKTQAPTPVAPAKP--SIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCK 255 PKSK A A A ++EDL+++L R ++ ++ Q VK++DQ+LA AP + +A+ CK Sbjct: 3 PKSKAAAAAAAAGAAQPVAVEDLFTTLHRHIEAGEFPQAVKVADQVLAAAPGDEDAVRCK 62
Query: 256 VVALIQDDKVDDALSTLNSSATSDNSLNFHK 348 VVA I+ D ++ AL+ + ++ L++ K Sbjct: 63 VVAHIKSDAIEKALAAIRAAERLPIDLSYCK 93
>tr|Q9FXD1|Q9FXD1_ARATH F12A21.20 OS=Arabidopsis thaliana GN=At1g67650 PE=4 SV=1 Length = 651
Score = 68.2 bits (165), Expect(2) = 4e-24 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 10/99 (10%) Frame = +1
Query: 82 PKSKTQAPTPVAPAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVV 261 PKSK T + P+IEDL++SL + ++ Y + VK++DQ+L+ P + +A+ CKVV Sbjct: 3 PKSKENPKT----STPAIEDLFTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVV 58
Query: 262 ALIQDDKVDD----------ALSTLNSSATSDNSLNFHK 348 ALI+DDK DD ALS +NS L FHK Sbjct: 59 ALIKDDKFDDYLIKDVKINGALSVINSFPI---DLGFHK 94
Score = 66.6 bits (161), Expect(2) = 4e-24 Identities = 40/87 (45%), Positives = 57/87 (65%) Frame = +3
Query: 348 GLEKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEV 527 GLE+ L LEAQIL G+ +AC+ YQ L+ K G+ E+ NL+A+ I GK+ +V Sbjct: 113 GLERESKTLLLEAQILNCLGKVDACVDVYQKLN-KSGIKLIEV--NLVAALIRAGKASQV 169
Query: 528 SSLMESLKVTPRSSLELAYNAACALIE 608 +ESLK+ P ++ +LAYN AC+LIE Sbjct: 170 ---LESLKIRPTTTYQLAYNTACSLIE 193
>tr|A8JH66|A8JH66_CHLRE Subunit of the signal recognition particle OS=Chlamydomonas reinhardtii GN=SRP72 PE=4 SV=1 Length = 746
Score = 84.0 bits (206), Expect(2) = 2e-23 Identities = 39/80 (48%), Positives = 57/80 (71%) Frame = +3
Query: 369 VLQLEAQILYRQGEFNACIASYQALSQKFGMDSTELKTNLIASYISGGKSDEVSSLMESL 548 +LQL+AQ+ YR+G CI +Y L Q++ DS ELKTN++A+Y++ G S E+ LM +L Sbjct: 114 LLQLQAQLEYRRGRSKDCINTYDKLFQQYKADSLELKTNVLAAYVAAGLSAELPDLMAAL 173
Query: 549 KVTPRSSLELAYNAACALIE 608 KV PR S E+A+N +C L+E Sbjct: 174 KVKPRDSFEVAFNRSCGLVE 193
Score = 48.5 bits (114), Expect(2) = 2e-23 Identities = 30/78 (38%), Positives = 43/78 (55%) Frame = +1
Query: 115 APAKPSIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDA 294 A A P +E + L CV+ +++ +K D+ILA AP + +AL CKVVA +Q + A Sbjct: 4 AEATP-LEAAFEKLAACVKNQQHKKALKACDEILALAPGDEDALRCKVVAHMQLQEFQPA 62
Query: 295 LSTLNSSATSDNSLNFHK 348 L+ LN S L F K Sbjct: 63 LTLLNKPPLSALPLGFEK 80
>tr|A0PJ97|A0PJ97_MOUSE Srp72 protein (Fragment) OS=Mus musculus GN=Srp72 PE=2 SV=1 Length = 559
Score = 48.1 bits (113), Expect(2) = 2e-10 Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 2/75 (2%) Frame = +1
Query: 130 SIEDLYSSLDRCVQTNDYRQIVKISDQILADAPEELNALLCKVVALIQDDKVDDALSTLN 309 S+ L+S ++R Q +D+ + +K ++IL +++ AL CKVV LIQ+ +AL+ +N Sbjct: 10 SVPALWSEVNRYGQNSDFTRALKTVNKILQINKDDVTALHCKVVCLIQNGSFKEALNVIN 69
Query: 310 --SSATSDNSLNFHK 348 + ++NSL+F K Sbjct: 70 THTKVLANNSLSFEK 84
Score = 40.4 bits (93), Expect(2) = 2e-10 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Frame = +3
Query: 354 EKNEGVLQLEAQILYRQGEFNACIASYQALSQKFGMD-STELKTNLIASYISGGKSDEVS 530 ++ + + +L Q+LYR ++ C+A Y+ L + D E KTNL S + +S+ Sbjct: 106 QQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDDYDEERKTNL--SAVVAAQSNWEK 163
Query: 531 SLMESLKVTPRSSLELAYNAACALI 605 + E+L + + EL YNAACALI Sbjct: 164 VVPENLGL-QEGTHELCYNAACALI 187
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