DK955260
Clone id TST39A01NGRL0022_J22
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGCAAAATGTCGGAGACGAAGGCGAAGGTGAAGGTGAAACACGAAGCAGAGACGAAGACG
AAGCTCGCCAAGTCTTCTCTAGCCGGCGATGCCAAGGTGAAGGTGAAGAAAGAGGAAATA
GAAGAGAGCCCGGTGACCAAGAAGCACTCTGTAGCTCCTTCAAAATCTGTGAAGAAGGAG
ACAGATGTTGCCGTGAAAGTCTCGAAAAGAGAAGAGAGCTCCAAGACCAAGAAGAGCGAA
GTCACAGGCAAGGTCAAGGTCGTCAAGAAGGAAGAGGCTGTGGTCTCAGTGGGCACCCCC
CCTAAGAAGAAGAAATCCTCAACTGATGAACCCGAGAAGAAAGAAAAGAAAGTATACAGC
TTTCCAGGCCAGAAACATGACCCTCCCGATGAGAGAGATCCATTGCGCATGTTCTACGAG
TCGCTGTACTCTCAAAACTCAGCAAGCGAGATGGCGGAAATATGGATGATGGAACATGGA
CTTCTGGAACATGATGTTGCAAAGAAGGCATTCGAACGTAAGAAGAAAAATCAGGCCAGC
CAGAAACTGGGATCT
■■Homology search results ■■ -
sp_hit_id Q8CBX9
Definition sp|Q8CBX9|BIVM_MOUSE Basic immunoglobulin-like variable motif-containing protein OS=Mus musculus
Align length 77
Score (bit) 31.2
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955260|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J22, 5'
(555 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CBX9|BIVM_MOUSE Basic immunoglobulin-like variable motif-co... 31 3.5
sp|Q5A660|PXR1_CANAL Protein PXR1 OS=Candida albicans GN=PXR1 PE... 31 3.6
sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20... 31 4.7
sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberel... 30 6.1
sp|P04275|VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF... 30 7.9
sp|A7TG30|PXR1_VANPO Protein PXR1 OS=Vanderwaltozyma polyspora (... 30 8.0

>sp|Q8CBX9|BIVM_MOUSE Basic immunoglobulin-like variable
motif-containing protein OS=Mus musculus GN=Bivm PE=2
SV=1
Length = 502

Score = 31.2 bits (69), Expect = 3.5
Identities = 16/77 (20%), Positives = 31/77 (40%)
Frame = +2

Query: 281 WSQWAPPLRRRNPQLMNPRRKKRKYTAFQARNMTLPMREIHCACSTSRCTLKTQQARWRK 460
W+ L +NP+ ++ R +R L R+ C + Q+ W++
Sbjct: 374 WADIVTDLNTQNPEFLDIRHLERG----------LQFRKTKKVGGNLHCIIAFQRLSWQR 423

Query: 461 YG*WNMDFWNMMLQRRH 511
+G WN F + + +H
Sbjct: 424 FGFWNFPFGTITQESQH 440


>sp|Q5A660|PXR1_CANAL Protein PXR1 OS=Candida albicans GN=PXR1 PE=3
SV=1
Length = 276

Score = 31.2 bits (69), Expect = 3.6
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1

Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRM-FYESLYSQNSAS 447
KKKK D+ +KK+KK K D D++D +R E+L S+ S++
Sbjct: 191 KKKKEKKDKKDKKDKKNKKDKKDKKDKKDKKDKIRTGSDETLVSKESSA 239


>sp|A7XDQ9|B3GTK_ARATH Probable beta-1,3-galactosyltransferase 20
OS=Arabidopsis thaliana GN=B3GALT20 PE=2 SV=1
Length = 684

Score = 30.8 bits (68), Expect = 4.7
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Frame = +1

Query: 319 STDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASE---MAEIWMMEHGLLE 489
ST P +K F + PP P R+F L + N SE + + WM +
Sbjct: 408 STSHPSFSPQKAIEFSSEWKAPPLPGTPFRLFMGVLSATNHFSERMAVRKTWMQHPSIKS 467

Query: 490 HDVAKKAF----ERKKKNQASQK 546
DV + F RK+ N +K
Sbjct: 468 SDVVARFFVALNPRKEVNAMLKK 490


>sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella
zeae GN=HAS1 PE=3 SV=1
Length = 590

Score = 30.4 bits (67), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1

Query: 301 PKKKKSSTDEPEKKEKKVYSFPGQKHDPPDE 393
P K K S+ P+KK KKV + HD P++
Sbjct: 19 PSKGKKSSSIPDKKSKKVKRAEPEPHDEPED 49


>sp|P04275|VWF_HUMAN von Willebrand factor OS=Homo sapiens GN=VWF PE=1
SV=2
Length = 2813

Score = 30.0 bits (66), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +2

Query: 284 SQWAPPLRRRNPQLMNPRRKKRKYTAFQARNMTLPMREI-------HCACSTSRC 427
SQWA P NP L+N + ++ Q RN++ P E+ +C TS C
Sbjct: 2519 SQWASP---ENPCLINECVRVKEEVFIQQRNVSCPQLEVPVCPSGFQLSCKTSAC 2570


>sp|A7TG30|PXR1_VANPO Protein PXR1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=PXR1 PE=3 SV=1
Length = 287

Score = 30.0 bits (66), Expect = 8.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1

Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERD 399
K KK T++ EKKEKK +K D D++D
Sbjct: 190 KDKKDKTEKKEKKEKKEKKEKKEKKDKKDKKD 221


tr_hit_id A9NNA3
Definition tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 84
Score (bit) 111.0
E-value 3.0e-23
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955260|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J22, 5'
(555 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea... 111 3e-23
tr|Q5TKF1|Q5TKF1_ORYSJ cDNA clone:002-140-D08, full insert seque... 105 1e-21
tr|B8AXI0|B8AXI0_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21
tr|A9RBZ3|A9RBZ3_PHYPA Predicted protein (Fragment) OS=Physcomit... 104 4e-21
tr|A9SRC3|A9SRC3_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21
tr|A7P574|A7P574_VITVI Chromosome chr4 scaffold_6, whole genome ... 103 6e-21
tr|Q10P22|Q10P22_ORYSJ Os03g0249900 protein OS=Oryza sativa subs... 100 7e-20
tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome... 100 7e-20
tr|A2XEK8|A2XEK8_ORYSI Putative uncharacterized protein OS=Oryza... 100 7e-20
tr|B6T7I9|B6T7I9_MAIZE Putative uncharacterized protein OS=Zea m... 99 2e-19
tr|B6TJW9|B6TJW9_MAIZE Putative uncharacterized protein OS=Zea m... 97 8e-19
tr|B7FL43|B7FL43_MEDTR Putative uncharacterized protein OS=Medic... 96 1e-18
tr|Q0DFE0|Q0DFE0_ORYSJ Os05g0596200 protein (Fragment) OS=Oryza ... 96 1e-18
tr|Q9LYD2|Q9LYD2_ARATH Putative uncharacterized protein F15N18_1... 95 3e-18
tr|Q9LNS7|Q9LNS7_ARATH T20H2.23 protein OS=Arabidopsis thaliana ... 91 3e-17
tr|A9P7U6|A9P7U6_POPTR Putative uncharacterized protein OS=Popul... 91 4e-17
tr|A3BZ42|A3BZ42_ORYSJ Putative uncharacterized protein OS=Oryza... 91 5e-17
tr|A9RY89|A9RY89_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14
tr|A9SMT4|A9SMT4_PHYPA Predicted protein OS=Physcomitrella paten... 80 6e-14
tr|B7E7K4|B7E7K4_ORYSJ cDNA clone:001-104-D04, full insert seque... 76 1e-12
tr|A4RTB1|A4RTB1_OSTLU Predicted protein OS=Ostreococcus lucimar... 73 9e-12
tr|Q0WSI8|Q0WSI8_ARATH Putative uncharacterized protein At5g1160... 65 2e-09
tr|Q22GC2|Q22GC2_TETTH Putative uncharacterized protein OS=Tetra... 57 9e-07
tr|A8IZE2|A8IZE2_CHLRE Predicted protein OS=Chlamydomonas reinha... 56 1e-06
tr|A0CWV6|A0CWV6_PARTE Chromosome undetermined scaffold_3, whole... 50 6e-05
tr|A0DQ61|A0DQ61_PARTE Chromosome undetermined scaffold_6, whole... 48 3e-04
tr|B8LC58|B8LC58_THAPS Predicted protein OS=Thalassiosira pseudo... 47 5e-04
tr|B7G3U0|B7G3U0_PHATR Predicted protein OS=Phaeodactylum tricor... 44 0.004
tr|Q5CTV7|Q5CTV7_CRYPV Putative uncharacterized protein OS=Crypt... 44 0.004
tr|Q5CL20|Q5CL20_CRYHO Putative uncharacterized protein OS=Crypt... 44 0.004

>tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 226

Score = 111 bits (277), Expect = 3e-23
Identities = 53/84 (63%), Positives = 62/84 (73%)
Frame = +1

Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGL 483
KK S + EK KKVYS GQKHDPP+ERDPLR+FY+SLY Q SEMA IWMMEHGL
Sbjct: 97 KKNSSPSKAKEKTVKKVYSLTGQKHDPPEERDPLRIFYQSLYEQIPTSEMATIWMMEHGL 156

Query: 484 LEHDVAKKAFERKKKNQASQKLGS 555
L + AKKA+ERK++ Q QK G+
Sbjct: 157 LPPEKAKKAYERKQRKQQQQKTGT 180


>tr|Q5TKF1|Q5TKF1_ORYSJ cDNA clone:002-140-D08, full insert sequence
OS=Oryza sativa subsp. japonica GN=OSJNBa0030I14.15 PE=2
SV=1
Length = 164

Score = 105 bits (263), Expect = 1e-21
Identities = 50/85 (58%), Positives = 63/85 (74%)
Frame = +1

Query: 301 PKKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHG 480
PK+ S+T K EKKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG
Sbjct: 31 PKRSASATGSRGKTEKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHG 90

Query: 481 LLEHDVAKKAFERKKKNQASQKLGS 555
LL + AKKA+E+K+K Q + G+
Sbjct: 91 LLSPERAKKAYEKKQKRQQQIRSGT 115


>tr|B8AXI0|B8AXI0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21244 PE=4 SV=1
Length = 164

Score = 105 bits (263), Expect = 1e-21
Identities = 50/85 (58%), Positives = 63/85 (74%)
Frame = +1

Query: 301 PKKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHG 480
PK+ S+T K EKKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG
Sbjct: 31 PKRSASATGSRGKTEKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHG 90

Query: 481 LLEHDVAKKAFERKKKNQASQKLGS 555
LL + AKKA+E+K+K Q + G+
Sbjct: 91 LLSPERAKKAYEKKQKRQQQIRSGT 115


>tr|A9RBZ3|A9RBZ3_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_26121 PE=4 SV=1
Length = 135

Score = 104 bits (259), Expect = 4e-21
Identities = 49/74 (66%), Positives = 57/74 (77%)
Frame = +1

Query: 334 EKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAF 513
+KKEKKVY PGQKHDPP+ERD LR+FY +L Q SEMAEIW+MEHGLL H A+KAF
Sbjct: 2 QKKEKKVYDLPGQKHDPPEERDALRIFYSTLREQIPESEMAEIWLMEHGLLSHAEAQKAF 61

Query: 514 ERKKKNQASQKLGS 555
ERK+K S K G+
Sbjct: 62 ERKQKRGQSSKHGT 75


>tr|A9SRC3|A9SRC3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_82929 PE=4 SV=1
Length = 369

Score = 103 bits (257), Expect = 6e-21
Identities = 48/74 (64%), Positives = 58/74 (78%)
Frame = +1

Query: 334 EKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAF 513
++KEKKVY PGQKH+PP+ERD LR+FY +L Q SEMAEIW+MEHGLL HD A+KAF
Sbjct: 232 QRKEKKVYDLPGQKHEPPEERDALRVFYSTLREQIPESEMAEIWLMEHGLLLHDEAQKAF 291

Query: 514 ERKKKNQASQKLGS 555
ERK+K S K G+
Sbjct: 292 ERKQKKGQSSKHGT 305


>tr|A7P574|A7P574_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032425001
PE=4 SV=1
Length = 194

Score = 103 bits (257), Expect = 6e-21
Identities = 47/84 (55%), Positives = 63/84 (75%)
Frame = +1

Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGL 483
K +T + +EKKVY+ PGQKHDPP+ER+PLR+FYESL Q +SEMAE WMMEHGL
Sbjct: 60 KTTTKTTTTVKVREKKVYTLPGQKHDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGL 119

Query: 484 LEHDVAKKAFERKKKNQASQKLGS 555
L + AKKA+E+K++ Q ++G+
Sbjct: 120 LSPEKAKKAYEKKQRRQKQIRMGT 143


>tr|Q10P22|Q10P22_ORYSJ Os03g0249900 protein OS=Oryza sativa subsp.
japonica GN=Os03g0249900 PE=2 SV=1
Length = 318

Score = 100 bits (248), Expect = 7e-20
Identities = 51/76 (67%), Positives = 56/76 (73%)
Frame = +1

Query: 328 EPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKK 507
E KKEKKVY PGQKHDPP ERDPLR+FYESLY Q SEMA IW+ME GLL DVA+K
Sbjct: 178 EKVKKEKKVYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQK 237

Query: 508 AFERKKKNQASQKLGS 555
FE+K+ QKL S
Sbjct: 238 VFEKKQ----GQKLKS 249


>tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00014417001
PE=4 SV=1
Length = 223

Score = 100 bits (248), Expect = 7e-20
Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 11/95 (11%)
Frame = +1

Query: 304 KKKKSSTDEPEK-----------KEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASE 450
KKKK DE +K +EKKVY PGQK D P+ERDPLR+FYE+L+ Q SE
Sbjct: 68 KKKKKKDDEKKKAAAKAEQNGKKREKKVYDLPGQKRDTPEERDPLRIFYETLFEQVPGSE 127

Query: 451 MAEIWMMEHGLLEHDVAKKAFERKKKNQASQKLGS 555
MA WMME GLL DVAKK +E+K K QK+ S
Sbjct: 128 MAAFWMMESGLLPKDVAKKVYEKKLKKNQQQKVAS 162


>tr|A2XEK8|A2XEK8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10766 PE=4 SV=1
Length = 317

Score = 100 bits (248), Expect = 7e-20
Identities = 51/76 (67%), Positives = 56/76 (73%)
Frame = +1

Query: 328 EPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKK 507
E KKEKKVY PGQKHDPP ERDPLR+FYESLY Q SEMA IW+ME GLL DVA+K
Sbjct: 177 EKVKKEKKVYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQK 236

Query: 508 AFERKKKNQASQKLGS 555
FE+K+ QKL S
Sbjct: 237 VFEKKQ----GQKLKS 248


>tr|B6T7I9|B6T7I9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 178

Score = 99.0 bits (245), Expect = 2e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +1

Query: 337 KKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAFE 516
K +KKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG+L + A+KA+E
Sbjct: 57 KADKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHGMLSPERARKAYE 116

Query: 517 RKKKNQASQKLGS 555
RK+K Q ++G+
Sbjct: 117 RKQKRQQQVRMGT 129