DK955260 |
Clone id |
TST39A01NGRL0022_J22 |
Library |
TST39 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J22. 5' end sequence. |
Accession |
DK955260 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1847Contig1 |
Sequence |
GGCAAAATGTCGGAGACGAAGGCGAAGGTGAAGGTGAAACACGAAGCAGAGACGAAGACG AAGCTCGCCAAGTCTTCTCTAGCCGGCGATGCCAAGGTGAAGGTGAAGAAAGAGGAAATA GAAGAGAGCCCGGTGACCAAGAAGCACTCTGTAGCTCCTTCAAAATCTGTGAAGAAGGAG ACAGATGTTGCCGTGAAAGTCTCGAAAAGAGAAGAGAGCTCCAAGACCAAGAAGAGCGAA GTCACAGGCAAGGTCAAGGTCGTCAAGAAGGAAGAGGCTGTGGTCTCAGTGGGCACCCCC CCTAAGAAGAAGAAATCCTCAACTGATGAACCCGAGAAGAAAGAAAAGAAAGTATACAGC TTTCCAGGCCAGAAACATGACCCTCCCGATGAGAGAGATCCATTGCGCATGTTCTACGAG TCGCTGTACTCTCAAAACTCAGCAAGCGAGATGGCGGAAATATGGATGATGGAACATGGA CTTCTGGAACATGATGTTGCAAAGAAGGCATTCGAACGTAAGAAGAAAAATCAGGCCAGC CAGAAACTGGGATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8CBX9 |
Definition |
sp|Q8CBX9|BIVM_MOUSE Basic immunoglobulin-like variable motif-containing protein OS=Mus musculus |
Align length |
77 |
Score (bit) |
31.2 |
E-value |
3.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNA3 |
Definition |
tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
84 |
Score (bit) |
111.0 |
E-value |
3.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955260|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_J22, 5' (555 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea... 111 3e-23 tr|Q5TKF1|Q5TKF1_ORYSJ cDNA clone:002-140-D08, full insert seque... 105 1e-21 tr|B8AXI0|B8AXI0_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A9RBZ3|A9RBZ3_PHYPA Predicted protein (Fragment) OS=Physcomit... 104 4e-21 tr|A9SRC3|A9SRC3_PHYPA Predicted protein OS=Physcomitrella paten... 103 6e-21 tr|A7P574|A7P574_VITVI Chromosome chr4 scaffold_6, whole genome ... 103 6e-21 tr|Q10P22|Q10P22_ORYSJ Os03g0249900 protein OS=Oryza sativa subs... 100 7e-20 tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome... 100 7e-20 tr|A2XEK8|A2XEK8_ORYSI Putative uncharacterized protein OS=Oryza... 100 7e-20 tr|B6T7I9|B6T7I9_MAIZE Putative uncharacterized protein OS=Zea m... 99 2e-19 tr|B6TJW9|B6TJW9_MAIZE Putative uncharacterized protein OS=Zea m... 97 8e-19 tr|B7FL43|B7FL43_MEDTR Putative uncharacterized protein OS=Medic... 96 1e-18 tr|Q0DFE0|Q0DFE0_ORYSJ Os05g0596200 protein (Fragment) OS=Oryza ... 96 1e-18 tr|Q9LYD2|Q9LYD2_ARATH Putative uncharacterized protein F15N18_1... 95 3e-18 tr|Q9LNS7|Q9LNS7_ARATH T20H2.23 protein OS=Arabidopsis thaliana ... 91 3e-17 tr|A9P7U6|A9P7U6_POPTR Putative uncharacterized protein OS=Popul... 91 4e-17 tr|A3BZ42|A3BZ42_ORYSJ Putative uncharacterized protein OS=Oryza... 91 5e-17 tr|A9RY89|A9RY89_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14 tr|A9SMT4|A9SMT4_PHYPA Predicted protein OS=Physcomitrella paten... 80 6e-14 tr|B7E7K4|B7E7K4_ORYSJ cDNA clone:001-104-D04, full insert seque... 76 1e-12 tr|A4RTB1|A4RTB1_OSTLU Predicted protein OS=Ostreococcus lucimar... 73 9e-12 tr|Q0WSI8|Q0WSI8_ARATH Putative uncharacterized protein At5g1160... 65 2e-09 tr|Q22GC2|Q22GC2_TETTH Putative uncharacterized protein OS=Tetra... 57 9e-07 tr|A8IZE2|A8IZE2_CHLRE Predicted protein OS=Chlamydomonas reinha... 56 1e-06 tr|A0CWV6|A0CWV6_PARTE Chromosome undetermined scaffold_3, whole... 50 6e-05 tr|A0DQ61|A0DQ61_PARTE Chromosome undetermined scaffold_6, whole... 48 3e-04 tr|B8LC58|B8LC58_THAPS Predicted protein OS=Thalassiosira pseudo... 47 5e-04 tr|B7G3U0|B7G3U0_PHATR Predicted protein OS=Phaeodactylum tricor... 44 0.004 tr|Q5CTV7|Q5CTV7_CRYPV Putative uncharacterized protein OS=Crypt... 44 0.004 tr|Q5CL20|Q5CL20_CRYHO Putative uncharacterized protein OS=Crypt... 44 0.004
>tr|A9NNA3|A9NNA3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 226
Score = 111 bits (277), Expect = 3e-23 Identities = 53/84 (63%), Positives = 62/84 (73%) Frame = +1
Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGL 483 KK S + EK KKVYS GQKHDPP+ERDPLR+FY+SLY Q SEMA IWMMEHGL Sbjct: 97 KKNSSPSKAKEKTVKKVYSLTGQKHDPPEERDPLRIFYQSLYEQIPTSEMATIWMMEHGL 156
Query: 484 LEHDVAKKAFERKKKNQASQKLGS 555 L + AKKA+ERK++ Q QK G+ Sbjct: 157 LPPEKAKKAYERKQRKQQQQKTGT 180
>tr|Q5TKF1|Q5TKF1_ORYSJ cDNA clone:002-140-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBa0030I14.15 PE=2 SV=1 Length = 164
Score = 105 bits (263), Expect = 1e-21 Identities = 50/85 (58%), Positives = 63/85 (74%) Frame = +1
Query: 301 PKKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHG 480 PK+ S+T K EKKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG Sbjct: 31 PKRSASATGSRGKTEKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHG 90
Query: 481 LLEHDVAKKAFERKKKNQASQKLGS 555 LL + AKKA+E+K+K Q + G+ Sbjct: 91 LLSPERAKKAYEKKQKRQQQIRSGT 115
>tr|B8AXI0|B8AXI0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21244 PE=4 SV=1 Length = 164
Score = 105 bits (263), Expect = 1e-21 Identities = 50/85 (58%), Positives = 63/85 (74%) Frame = +1
Query: 301 PKKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHG 480 PK+ S+T K EKKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG Sbjct: 31 PKRSASATGSRGKTEKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHG 90
Query: 481 LLEHDVAKKAFERKKKNQASQKLGS 555 LL + AKKA+E+K+K Q + G+ Sbjct: 91 LLSPERAKKAYEKKQKRQQQIRSGT 115
>tr|A9RBZ3|A9RBZ3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_26121 PE=4 SV=1 Length = 135
Score = 104 bits (259), Expect = 4e-21 Identities = 49/74 (66%), Positives = 57/74 (77%) Frame = +1
Query: 334 EKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAF 513 +KKEKKVY PGQKHDPP+ERD LR+FY +L Q SEMAEIW+MEHGLL H A+KAF Sbjct: 2 QKKEKKVYDLPGQKHDPPEERDALRIFYSTLREQIPESEMAEIWLMEHGLLSHAEAQKAF 61
Query: 514 ERKKKNQASQKLGS 555 ERK+K S K G+ Sbjct: 62 ERKQKRGQSSKHGT 75
>tr|A9SRC3|A9SRC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_82929 PE=4 SV=1 Length = 369
Score = 103 bits (257), Expect = 6e-21 Identities = 48/74 (64%), Positives = 58/74 (78%) Frame = +1
Query: 334 EKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAF 513 ++KEKKVY PGQKH+PP+ERD LR+FY +L Q SEMAEIW+MEHGLL HD A+KAF Sbjct: 232 QRKEKKVYDLPGQKHEPPEERDALRVFYSTLREQIPESEMAEIWLMEHGLLLHDEAQKAF 291
Query: 514 ERKKKNQASQKLGS 555 ERK+K S K G+ Sbjct: 292 ERKQKKGQSSKHGT 305
>tr|A7P574|A7P574_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032425001 PE=4 SV=1 Length = 194
Score = 103 bits (257), Expect = 6e-21 Identities = 47/84 (55%), Positives = 63/84 (75%) Frame = +1
Query: 304 KKKKSSTDEPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGL 483 K +T + +EKKVY+ PGQKHDPP+ER+PLR+FYESL Q +SEMAE WMMEHGL Sbjct: 60 KTTTKTTTTVKVREKKVYTLPGQKHDPPEEREPLRIFYESLSKQIPSSEMAEFWMMEHGL 119
Query: 484 LEHDVAKKAFERKKKNQASQKLGS 555 L + AKKA+E+K++ Q ++G+ Sbjct: 120 LSPEKAKKAYEKKQRRQKQIRMGT 143
>tr|Q10P22|Q10P22_ORYSJ Os03g0249900 protein OS=Oryza sativa subsp. japonica GN=Os03g0249900 PE=2 SV=1 Length = 318
Score = 100 bits (248), Expect = 7e-20 Identities = 51/76 (67%), Positives = 56/76 (73%) Frame = +1
Query: 328 EPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKK 507 E KKEKKVY PGQKHDPP ERDPLR+FYESLY Q SEMA IW+ME GLL DVA+K Sbjct: 178 EKVKKEKKVYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQK 237
Query: 508 AFERKKKNQASQKLGS 555 FE+K+ QKL S Sbjct: 238 VFEKKQ----GQKLKS 249
>tr|A7NSV1|A7NSV1_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014417001 PE=4 SV=1 Length = 223
Score = 100 bits (248), Expect = 7e-20 Identities = 51/95 (53%), Positives = 60/95 (63%), Gaps = 11/95 (11%) Frame = +1
Query: 304 KKKKSSTDEPEK-----------KEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASE 450 KKKK DE +K +EKKVY PGQK D P+ERDPLR+FYE+L+ Q SE Sbjct: 68 KKKKKKDDEKKKAAAKAEQNGKKREKKVYDLPGQKRDTPEERDPLRIFYETLFEQVPGSE 127
Query: 451 MAEIWMMEHGLLEHDVAKKAFERKKKNQASQKLGS 555 MA WMME GLL DVAKK +E+K K QK+ S Sbjct: 128 MAAFWMMESGLLPKDVAKKVYEKKLKKNQQQKVAS 162
>tr|A2XEK8|A2XEK8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10766 PE=4 SV=1 Length = 317
Score = 100 bits (248), Expect = 7e-20 Identities = 51/76 (67%), Positives = 56/76 (73%) Frame = +1
Query: 328 EPEKKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKK 507 E KKEKKVY PGQKHDPP ERDPLR+FYESLY Q SEMA IW+ME GLL DVA+K Sbjct: 177 EKVKKEKKVYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQK 236
Query: 508 AFERKKKNQASQKLGS 555 FE+K+ QKL S Sbjct: 237 VFEKKQ----GQKLKS 248
>tr|B6T7I9|B6T7I9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 178
Score = 99.0 bits (245), Expect = 2e-19 Identities = 44/73 (60%), Positives = 58/73 (79%) Frame = +1
Query: 337 KKEKKVYSFPGQKHDPPDERDPLRMFYESLYSQNSASEMAEIWMMEHGLLEHDVAKKAFE 516 K +KKVYS PGQK DPP+ER+PLR+FYESL Q +SEMAE W+MEHG+L + A+KA+E Sbjct: 57 KADKKVYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHGMLSPERARKAYE 116
Query: 517 RKKKNQASQKLGS 555 RK+K Q ++G+ Sbjct: 117 RKQKRQQQVRMGT 129
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