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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955254
Clone id TST39A01NGRL0022_J16
Library
Length 628
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_J16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
ATAGCCCCTCTCAAGCTCGCGTGTCTTTTGCTCGCATCAACTTCTCTTCCGCGAATCCAC
AACCGTTACCTTCTCTGCACCCTTTAGAGGGTCTCTCACGCTGCGCCTTCGACAAGCTCC
GCCCTTGTCTTCTTCAATTCCAGCACCTGCTCCAAAATCTGCTTGCAGCCAAACCTACAC
CTTTTTGGGCATTTGCCTCTCTTTCTACAAATGGCAGCATTGCCAATGATAGCAAACCAC
AAGAAAGCATCTCCAATTCTCTTTCGGTCGCTAATCTGAGCCCTAATCACAACCCCAATC
CCAATCCTAGACCTCAGAGGCGGCCACGGCAAGGCTCACAACAGGCAACAAGCGAGGAGC
AGGAGCGTGTTCTCATCAGCGAAGTCCTTATTCAGAATAAGGATGGAGAGGAATTAGAGA
ACAAGGAGCTTCTCAGCACAGCTGGTTCTGCCTTGAAAGCTTCCAAACCTAATTCTGCAC
TCACGGTGAAGGAGGTTCAAGAAGACGTCCACCGCATCATAGAAACCGGGTATTTCTCTG
CTTGTATGCCCATTGCAGAAGATACCAGAGATGGCATTCGTCTAATATTCCCGGTAGAGC
CTAATCAGGAATTTAAAGGAATGATCTG
■■Homology search results ■■ -
sp_hit_id Q9C5J8
Definition sp|Q9C5J8|OEP80_ARATH Outer envelope protein of 80 kDa OS=Arabidopsis thaliana
Align length 89
Score (bit) 130.0
E-value 7.0e-30
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955254|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J16, 5'
         (628 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9C5J8|OEP80_ARATH Outer envelope protein of 80 kDa OS=Arabid...   130   7e-30
sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein of 80 kDa OS=Oryza ...   125   2e-28
sp|A2X208|OEP80_ORYSI Outer envelope protein of 80 kDa OS=Oryza ...   125   2e-28
sp|Q9UGI6|KCNN3_HUMAN Small conductance calcium-activated potass...    31   4.6  
sp|Q9NP70|AMBN_HUMAN Ameloblastin OS=Homo sapiens GN=AMBN PE=1 SV=1    31   4.6  

>sp|Q9C5J8|OEP80_ARATH Outer envelope protein of 80 kDa
           OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1
          Length = 732

 Score =  130 bits (326), Expect = 7e-30
 Identities = 62/89 (69%), Positives = 77/89 (86%)
 Frame = +3

Query: 360 QERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYFS 539
           +ERVLISEVL++ KDGEELE K+L   A +ALKA + NSALT++EVQEDVHRIIE+GYF 
Sbjct: 159 EERVLISEVLVRTKDGEELERKDLEMEALAALKACRANSALTIREVQEDVHRIIESGYFC 218

Query: 540 ACMPIAEDTRDGIRLIFPVEPNQEFKGMI 626
           +C P+A DTRDGIRL+F VEPNQEF+G++
Sbjct: 219 SCTPVAVDTRDGIRLMFQVEPNQEFRGLV 247


>sp|Q6H7M7|OEP80_ORYSJ Outer envelope protein of 80 kDa OS=Oryza
           sativa subsp. japonica GN=OEP80 PE=3 SV=2
          Length = 665

 Score =  125 bits (314), Expect = 2e-28
 Identities = 57/89 (64%), Positives = 75/89 (84%)
 Frame = +3

Query: 360 QERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYFS 539
           +ERVLISEV ++ KDGE LE  EL + A +AL+A +PN+ALTV+EVQEDVHR++E+G F 
Sbjct: 91  EERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQEDVHRVVESGLFR 150

Query: 540 ACMPIAEDTRDGIRLIFPVEPNQEFKGMI 626
           +CMP+A DTRDGIRL+F VEPNQ+F G++
Sbjct: 151 SCMPVAVDTRDGIRLVFEVEPNQDFHGLV 179


>sp|A2X208|OEP80_ORYSI Outer envelope protein of 80 kDa OS=Oryza
           sativa subsp. indica GN=OEP80 PE=3 SV=1
          Length = 665

 Score =  125 bits (314), Expect = 2e-28
 Identities = 57/89 (64%), Positives = 75/89 (84%)
 Frame = +3

Query: 360 QERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYFS 539
           +ERVLISEV ++ KDGE LE  EL + A +AL+A +PN+ALTV+EVQEDVHR++E+G F 
Sbjct: 91  EERVLISEVAVRGKDGEPLERPELEAAAAAALRACRPNAALTVREVQEDVHRVVESGLFR 150

Query: 540 ACMPIAEDTRDGIRLIFPVEPNQEFKGMI 626
           +CMP+A DTRDGIRL+F VEPNQ+F G++
Sbjct: 151 SCMPVAVDTRDGIRLVFEVEPNQDFHGLV 179


>sp|Q9UGI6|KCNN3_HUMAN Small conductance calcium-activated potassium
           channel protein 3 OS=Homo sapiens GN=KCNN3 PE=2 SV=1
          Length = 736

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 29/128 (22%), Positives = 47/128 (36%)
 Frame = +1

Query: 103 APSTSSALVFFNSSTCSKICLQPNLHLFGHLPLFLQMAALPMIANHKKASPILFRSXXXX 282
           AP +S++    + S+     L  N HL GH P     +     + H++ASP++ R     
Sbjct: 115 APPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASPLVHRRDSNP 174

Query: 283 XXXXXXXXXXXRGGHGKAHNRQQARSRSVFSSAKSLFRIRMERN*RTRSFSAQLVLP*KL 462
                       GG  K  +R  A  R++  +              T     QL  P   
Sbjct: 175 FTEIAMSSCKYSGGVMKPLSRLSASRRNLIEA-------------ETEGQPLQLFSPSNP 221

Query: 463 PNLILHSR 486
           P +++ SR
Sbjct: 222 PEIVISSR 229


>sp|Q9NP70|AMBN_HUMAN Ameloblastin OS=Homo sapiens GN=AMBN PE=1 SV=1
          Length = 447

 Score = 31.2 bits (69), Expect = 4.6
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = +1

Query: 106 PSTSSALVFFNSSTCSKICLQPNLHLFGHLPLFLQMAALPMI 231
           P   SA    N +T  K  LQP +HL GHLP  LQ   LP++
Sbjct: 125 PFLQSAAATTNQATALKEALQPPIHL-GHLP--LQEGELPLV 163
tr_hit_id A5BX10
Definition tr|A5BX10|A5BX10_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 91
Score (bit) 137.0
E-value 5.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955254|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0022_J16, 5'
         (628 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BX10|A5BX10_VITVI Putative uncharacterized protein OS=Vitis...   137   5e-31
tr|B4FAF5|B4FAF5_MAIZE Putative uncharacterized protein OS=Zea m...   125   2e-27
tr|A8J137|A8J137_CHLRE Chloroplast outer envelope protein OS=Chl...    75   4e-12
tr|B4WNS4|B4WNS4_9SYNE Outer membrane protein, OMP85 family, put...    58   4e-07
tr|B0JQ19|B0JQ19_MICAN Chloroplastic outer envelope membrane pro...    58   5e-07
tr|A8YF27|A8YF27_MICAE Genome sequencing data, contig C302 OS=Mi...    57   7e-07
tr|Q10VV1|Q10VV1_TRIEI Surface antigen (D15) OS=Trichodesmium er...    57   1e-06
tr|B4VY37|B4VY37_9CYAN Outer membrane protein, OMP85 family, put...    56   2e-06
tr|P73472|P73472_SYNY3 Chloroplast import-associated channel IAP...    53   1e-05
tr|B2JBH9|B2JBH9_NOSP7 Surface antigen (D15) OS=Nostoc punctifor...    52   2e-05
tr|A0ZG92|A0ZG92_NODSP Putative uncharacterized protein OS=Nodul...    52   2e-05
tr|Q8YUR6|Q8YUR6_ANASP Alr2269 protein OS=Anabaena sp. (strain P...    52   4e-05
tr|Q3MH16|Q3MH16_ANAVT Surface antigen variable number OS=Anabae...    52   4e-05
tr|B2IWK5|B2IWK5_NOSP7 Surface antigen (D15) OS=Nostoc punctifor...    52   4e-05
tr|A2C4B1|A2C4B1_PROM1 Outer envelope membrane protein-like prot...    52   4e-05
tr|Q46JC8|Q46JC8_PROMT Probable import-associated channel, putat...    51   5e-05
tr|Q3AZF5|Q3AZF5_SYNS9 Chloroplast outer envelope membrane prote...    51   5e-05
tr|B5W228|B5W228_SPIMA Surface antigen (D15) OS=Arthrospira maxi...    51   6e-05
tr|B4B6Y1|B4B6Y1_9CHRO Surface antigen (D15) OS=Cyanothece sp. P...    50   8e-05
tr|Q3AHS4|Q3AHS4_SYNSC Outer envelope membrane protein-like OS=S...    50   1e-04
tr|B7KKQ3|B7KKQ3_9CHRO Surface antigen (D15) OS=Cyanothece sp. P...    50   1e-04
tr|Q064Y1|Q064Y1_9SYNE Chloroplast outer envelope membrane prote...    49   2e-04
tr|A7NZT2|A7NZT2_VITVI Chromosome chr6 scaffold_3, whole genome ...    49   2e-04
tr|B0CD46|B0CD46_ACAM1 Surface antigen variable number OS=Acaryo...    49   3e-04
tr|A9RBK5|A9RBK5_PHYPA Predicted protein OS=Physcomitrella paten...    48   4e-04
tr|A0YI83|A0YI83_9CYAN Putative uncharacterized protein OS=Lyngb...    47   7e-04
tr|Q4BYY7|Q4BYY7_CROWT Surface antigen (D15):Surface antigen var...    47   0.001
tr|B1WQL7|B1WQL7_CYAA5 Bacterial surface antigen D15-like protei...    46   0.002
tr|B5IMM3|B5IMM3_9CHRO Membrane protein, OMP85 family protein OS...    46   0.002
tr|Q7V0C8|Q7V0C8_PROMP Chloroplast outer envelope membrane prote...    45   0.005

>tr|A5BX10|A5BX10_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_006499 PE=4 SV=1
          Length = 321

 Score =  137 bits (345), Expect = 5e-31
 Identities = 65/91 (71%), Positives = 82/91 (90%)
 Frame = +3

Query: 354 EEQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGY 533
           E++ERVLISEVL++NKDGEELE K+L + A +ALKA +PNSALTV+EVQEDVHRII++G 
Sbjct: 97  EDEERVLISEVLVRNKDGEELERKDLEAEAVAALKACRPNSALTVREVQEDVHRIIDSGL 156

Query: 534 FSACMPIAEDTRDGIRLIFPVEPNQEFKGMI 626
           F +CMP+A DTRDGIRL+F VEPNQEF+G++
Sbjct: 157 FWSCMPVAVDTRDGIRLVFQVEPNQEFQGLV 187


>tr|B4FAF5|B4FAF5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 657

 Score =  125 bits (314), Expect = 2e-27
 Identities = 58/89 (65%), Positives = 75/89 (84%)
 Frame = +3

Query: 360 QERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYFS 539
           +ERVLISEV ++ KDGE LE  EL + A +AL+A +PN+ALTV+EVQEDVHRI+E+G F 
Sbjct: 83  EERVLISEVAVRGKDGEPLERPELEAEAAAALRACRPNAALTVREVQEDVHRIVESGLFR 142

Query: 540 ACMPIAEDTRDGIRLIFPVEPNQEFKGMI 626
           +CMP+A DTRDGIRL+F VEPNQ+F G++
Sbjct: 143 SCMPVAVDTRDGIRLVFEVEPNQDFHGLV 171


>tr|A8J137|A8J137_CHLRE Chloroplast outer envelope protein
           OS=Chlamydomonas reinhardtii GN=OEP80 PE=4 SV=1
          Length = 727

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 42/91 (46%), Positives = 59/91 (64%)
 Frame = +3

Query: 351 SEEQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETG 530
           SE ++R+LISEV +   DGE      L S A  AL  ++PN A T++EV+ DV R+  TG
Sbjct: 145 SEPEDRILISEVEVVGCDGE------LKSIAKQAL-TTRPNFAYTLEEVKADVRRVFATG 197

Query: 531 YFSACMPIAEDTRDGIRLIFPVEPNQEFKGM 623
           +FS   P AEDTRDG++L   V+PN+E + +
Sbjct: 198 WFSEVSPDAEDTRDGVKLRIRVKPNEEVRSL 228


>tr|B4WNS4|B4WNS4_9SYNE Outer membrane protein, OMP85 family,
           putative OS=Synechococcus sp. PCC 7335 GN=S7335_5527
           PE=4 SV=1
          Length = 809

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 31/86 (36%), Positives = 51/86 (59%)
 Frame = +3

Query: 348 TSEEQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIET 527
           T +E+ RVL++EV + + + +   N EL+    SA++ + P    T  ++QED++ +  T
Sbjct: 213 TVQEETRVLVAEVDVVSSNPQRPLNAELIDAVYSAVE-TVPGRTTTRSQLQEDINSVFST 271

Query: 528 GYFSACMPIAEDTRDGIRLIFPVEPN 605
           G+FS      EDT  G+R+ F VEPN
Sbjct: 272 GFFSNVQAEPEDTPLGVRVTFAVEPN 297


>tr|B0JQ19|B0JQ19_MICAN Chloroplastic outer envelope membrane
           protein homolog OS=Microcystis aeruginosa (strain
           NIES-843) GN=MAE_39210 PE=4 SV=1
          Length = 661

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 30/89 (33%), Positives = 53/89 (59%)
 Frame = +3

Query: 357 EQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYF 536
           E+ RVL++EV++Q  D  ELEN    +        ++P  + T  ++QED++ +  TG+F
Sbjct: 57  EESRVLVAEVVVQGAD-RELENLVYNTIR------TRPGRSTTRSQLQEDINAVFATGFF 109

Query: 537 SACMPIAEDTRDGIRLIFPVEPNQEFKGM 623
           +    + +DT  G+R+ F V+PN  F+G+
Sbjct: 110 ADVRAVPQDTPLGVRVTFEVQPNPVFQGV 138


>tr|A8YF27|A8YF27_MICAE Genome sequencing data, contig C302
           OS=Microcystis aeruginosa PCC 7806 GN=IPF_1302 PE=4 SV=1
          Length = 691

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 28/89 (31%), Positives = 55/89 (61%)
 Frame = +3

Query: 357 EQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIETGYF 536
           E+ RVL++EV++Q        N+EL +   + ++ ++P  + T  ++QED++ +  TG+F
Sbjct: 87  EESRVLVAEVVVQGA------NRELENLVYNTIR-TRPGRSATRSQLQEDINAVFATGFF 139

Query: 537 SACMPIAEDTRDGIRLIFPVEPNQEFKGM 623
           +    + +DT  G+R+ F V+PN  F+G+
Sbjct: 140 ADVRAVPQDTPLGVRVTFEVQPNPVFQGV 168


>tr|Q10VV1|Q10VV1_TRIEI Surface antigen (D15) OS=Trichodesmium
           erythraeum (strain IMS101) GN=Tery_4653 PE=3 SV=1
          Length = 999

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 345 ATSEEQERVLISEVLIQNKDGE-ELENKELLSTAGSALKASKPNSALTVKEVQEDVHRII 521
           +T EE+  VL++EV++   DGE + E   +++T        +P    T  ++Q+D++ I 
Sbjct: 400 STEEEEPLVLVAEVVVTGVDGELQDEVYRVINT--------QPGETTTRSQLQKDINAIF 451

Query: 522 ETGYFSACMPIAEDTRDGIRLIFPVEPN 605
            TG+F     I EDT  G+R+IF VEPN
Sbjct: 452 ATGFFQNVKAIPEDTPLGVRIIFKVEPN 479


>tr|B4VY37|B4VY37_9CYAN Outer membrane protein, OMP85 family,
           putative OS=Microcoleus chthonoplastes PCC 7420
           GN=MC7420_4345 PE=4 SV=1
          Length = 878

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +3

Query: 348 TSEEQERVLISEVLIQNKD----GEELENKELLSTAGSALKASKPNSALTVKEVQEDVHR 515
           T++ + RVL+SEV+I  +D     E+LEN+   + +      ++P  A T  ++Q+DV+ 
Sbjct: 262 TNQPEPRVLVSEVVIDFQDYTGPQEQLENEIFRAIS------TRPGLATTRSQLQQDVNA 315

Query: 516 IIETGYFSACMPIAEDTRDGIRLIFPVEPN 605
           +  TG+F +   + EDT  G+R+ F VEPN
Sbjct: 316 VFATGFFRSVDVVPEDTPLGVRITFVVEPN 345


>tr|P73472|P73472_SYNY3 Chloroplast import-associated channel IAP75
           OS=Synechocystis sp. (strain PCC 6803) GN=IAP75 PE=4
           SV=1
          Length = 861

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +3

Query: 345 ATSEEQERVLISEVLIQNKDGEELENKELLSTAGSALKASKPNSALTVKEVQEDVHRIIE 524
           A +EE+ RVL+SEVL+     E     ELL    +A++ ++P    T  ++QEDV+ I  
Sbjct: 252 APAEEEPRVLVSEVLVTGTTPE----LELL--VYNAIR-TQPGRTTTRTQLQEDVNAIYA 304

Query: 525 TGYFSACMPIAEDTRDGIRLIFPVEPNQEFKGM 623
           TGYFS       DT  G+R+ F V+ N  F G+
Sbjct: 305 TGYFSNVRVAPSDTPLGVRVTFEVQANPVFTGL 337


>tr|B2JBH9|B2JBH9_NOSP7 Surface antigen (D15) OS=Nostoc punctiforme
           (strain ATCC 29133 / PCC 73102) GN=Npun_BR156 PE=4 SV=1
          Length = 765

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
 Frame = +3

Query: 345 ATSEEQERVLISEVLIQNKDGE---ELENKELLSTAGSALKASKPNSALTVKEVQEDVHR 515
           A      RVL+SEV+++++ G+   ELEN+         +  ++P    T  ++QED++ 
Sbjct: 151 APEANDPRVLVSEVVVKSQTGQLSPELENQVY------RVIRTQPGQTTTRSQLQEDINA 204

Query: 516 IIETGYFSACMPIAEDTRDGIRLIFPVEPN 605
           I  TG+FS      EDT  G+R+ F V+PN
Sbjct: 205 IFGTGFFSNVQASPEDTPLGVRVSFVVQPN 234