DK955060 |
Clone id |
TST39A01NGRL0022_B13 |
Library |
TST39 |
Length |
547 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_B13. 5' end sequence. |
Accession |
DK955060 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTGTTCTTGTGTGCTCTCTCTGTGTGTGCGTACGAGAGAGCGAGAAACCATGGGTCTCAC CTTCACCAAGCTCTTCCAGCGATTGTTCGCCAAGAAGGAGATGCGCATCTTGATGGTTGG TCTCGATGCTGCTGGAAAAACCACCATTCTCTACAAGCTCAAGCTTGGCGAGATCGTGAC TACCATTCCAACCATAGGGTTTAATGTTGAAACTGTGGAGTACAAGAACATCAGCTTCAC AGTGTGGGATGTTGGAGGCCAAGATAAGATTCGCCCTCTTTGGAGGCACTACTTCCAGAA TACCCAAGGCCTGATCTTTGTCGTGGACAGTAATGACAGGGATCGTGTGGTGGAAGCTCG CGATGAACTTCATAGAATGCTTAATGAGGATGAGCTACGGGATGCTGTGCTTCTTGTCTT CGCAAACAAGCAGGATCTTCCCAATGCTATGAATGCAGCTGAGATCACAGACAAATTGGG CCTACACTCTCTTCGTCAACGCCACTGGTATATTCAGAGTACATGTGCCACATCAGGCGA AGGTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O48920 |
Definition |
sp|O48920|ARF_VIGUN ADP-ribosylation factor OS=Vigna unguiculata |
Align length |
161 |
Score (bit) |
322.0 |
E-value |
7.0e-88 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPC8 |
Definition |
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
325.0 |
E-value |
7.0e-88 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955060|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_B13, 5' (532 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea... 325 7e-88 tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subs... 323 3e-87 tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativ... 323 3e-87 tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hya... 323 3e-87 tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago tru... 323 3e-87 tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medic... 323 3e-87 tr|B7FKH3|B7FKH3_MEDTR Putative uncharacterized protein OS=Medic... 323 3e-87 tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea m... 323 3e-87 tr|A3ANY8|A3ANY8_ORYSJ Putative uncharacterized protein OS=Oryza... 323 3e-87 tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza... 323 3e-87 tr|Q5XUV1|Q5XUV1_WHEAT ADP-ribosylation factor OS=Triticum aesti... 323 4e-87 tr|Q9LDC9|Q9LDC9_ORYSJ cDNA clone:J013098K24, full insert sequen... 322 6e-87 tr|B7FJG0|B7FJG0_MEDTR Putative uncharacterized protein OS=Medic... 322 6e-87 tr|A7PM80|A7PM80_VITVI Chromosome chr14 scaffold_21, whole genom... 322 6e-87 tr|A2ZRJ6|A2ZRJ6_ORYSJ Putative uncharacterized protein OS=Oryza... 322 6e-87 tr|A2WN65|A2WN65_ORYSI Putative uncharacterized protein OS=Oryza... 322 6e-87 tr|Q76ME3|Q76ME3_WHEAT ADP-ribosylation factor OS=Triticum aesti... 322 8e-87 tr|Q70XK1|Q70XK1_HORVD ADP-ribosylation factor 1-like protein OS... 322 8e-87 tr|Q38JU3|Q38JU3_DAUCA ADP ribosylation factor 002 OS=Daucus car... 322 8e-87 tr|Q0JIB5|Q0JIB5_ORYSJ cDNA clone:001-047-G02, full insert seque... 322 8e-87 tr|Q0DH67|Q0DH67_ORYSJ Os05g0489600 protein OS=Oryza sativa subs... 322 8e-87 tr|B8AB93|B8AB93_ORYSI Putative uncharacterized protein OS=Oryza... 322 8e-87 tr|B7FIW2|B7FIW2_MEDTR Putative uncharacterized protein OS=Medic... 322 8e-87 tr|B7FI12|B7FI12_MEDTR Putative uncharacterized protein OS=Medic... 322 8e-87 tr|B3TLZ8|B3TLZ8_ELAGV ADP-ribosylation factor OS=Elaeis guineen... 322 8e-87 tr|A9TBY9|A9TBY9_PHYPA Arf1_5/ArfA-family small GTPase OS=Physco... 322 8e-87 tr|A9SED7|A9SED7_PHYPA Predicted protein OS=Physcomitrella paten... 322 8e-87 tr|A9P9X4|A9P9X4_POPTR Putative uncharacterized protein OS=Popul... 322 8e-87 tr|A9P9U3|A9P9U3_POPTR Putative uncharacterized protein OS=Popul... 322 8e-87 tr|A7QNZ2|A7QNZ2_VITVI Chromosome chr1 scaffold_135, whole genom... 322 8e-87
>tr|B8LPC8|B8LPC8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 181
Score = 325 bits (834), Expect = 7e-88 Identities = 161/161 (100%), Positives = 161/161 (100%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|Q7XZG0|Q7XZG0_ORYSJ Os03g0811900 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0033J23.16 PE=3 SV=1 Length = 181
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|Q6S4R7|Q6S4R7_MEDSA ADP-ribosylation factor OS=Medicago sativa GN=ARF1 PE=2 SV=1 Length = 181
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|Q677H6|Q677H6_HYAOR ADP-ribosylation factor (Fragment) OS=Hyacinthus orientalis GN=ARF PE=2 SV=1 Length = 199
Score = 323 bits (829), Expect = 3e-87 Identities = 161/172 (93%), Positives = 164/172 (95%) Frame = +2
Query: 17 SLCVRTRERETMGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 196 SL ++ MGL+FTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI Sbjct: 8 SLSLKPLSHVEMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 67
Query: 197 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 376 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR Sbjct: 68 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 127
Query: 377 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 128 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 179
>tr|Q5QQ33|Q5QQ33_MEDTR ADP-ribosylation factor 1 OS=Medicago truncatula GN=arf1 PE=2 SV=1 Length = 181
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|B7FL30|B7FL30_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 181
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|B7FKH3|B7FKH3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 191
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|B4FFK3|B4FFK3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 181
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|A3ANY8|A3ANY8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012510 PE=3 SV=1 Length = 184
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
>tr|A2XN99|A2XN99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14032 PE=4 SV=1 Length = 354
Score = 323 bits (829), Expect = 3e-87 Identities = 160/161 (99%), Positives = 160/161 (99%) Frame = +2
Query: 50 MGLTFTKLFQRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 229 MGLTFTKLF RLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN Sbjct: 1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
Query: 230 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 409 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV Sbjct: 61 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120
Query: 410 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 532 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
|