DK955048 |
Clone id |
TST39A01NGRL0022_B01 |
Library |
TST39 |
Length |
620 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0022_B01. 5' end sequence. |
Accession |
DK955048 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL788Contig1 |
Sequence |
GTAGCCTAGGCCTATACGAATTGAGTTTTGCAGCAATCATGAGAGGAGGAGGCAGGAAGA AGTTGAAACAGGGAGCGCTCAATGGAGGTTCCGAACTTCAGCCTGGCCAAACAATTAGAA GAGTGATCTCCTTGCGTGGGTCGAACATTATCGAGGTTGAAGATGAAGGGAATGCAACAA CGCTTTGTTTGCTTCCAGCAAAATTCAACAAAATTCTTTGGATAAGAAAAGGTAGCTTCG TAGTGGTGGAGGAGGGCGATCGTGAGAGGGCTTTGGAGTCTGGAAATAAGGTGACAGGAA TAATATGTCAAGTCCTTTTTGAAGAGCAAATACGATCATTGAAAAAGAGCCTTACTTGGC CGACTTGCTTTGAAGATTCGAAAACAAGGCCTCACTCACAAAGAGAAGGTAACAACAGCA AGGACAACGTGGAAAAAGCTTCAAACAATGATGAGAGTTGTTGTGATGTTGACAACGATA ATCTACCGCCCTTGGAATCCAACCAAAACAGGCGTGCAATGCAATTCGACTTGGAGGAGT CTTCAAGTGATGAAGAGGATTGACAGTGATGAACAAGTTGCAAAGTCATGGAGCAGATTG GAGAGAGAAGCTTTGCTTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q23646 |
Definition |
sp|Q23646|EIF1A_CAEEL Probable RNA-binding protein EIF1AD OS=Caenorhabditis elegans |
Align length |
138 |
Score (bit) |
70.1 |
E-value |
9.0e-12 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TAI9 |
Definition |
tr|A9TAI9|A9TAI9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
141.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955048|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0022_B01, 5' (620 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TAI9|A9TAI9_PHYPA Predicted protein (Fragment) OS=Physcomit... 141 3e-32 tr|A9NMM1|A9NMM1_PICSI Putative uncharacterized protein OS=Picea... 139 1e-31 tr|Q7XJP1|Q7XJP1_ARATH Putative translation initiation factor OS... 130 6e-29 tr|Q8GZX2|Q8GZX2_ORYSJ Os03g0114200 protein OS=Oryza sativa subs... 127 4e-28 tr|A3ADF4|A3ADF4_ORYSJ Putative uncharacterized protein OS=Oryza... 127 4e-28 tr|A2XBQ5|A2XBQ5_ORYSI Putative uncharacterized protein OS=Oryza... 127 4e-28 tr|B6TAS4|B6TAS4_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 126 9e-28 tr|B6U8C3|B6U8C3_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 98 3e-19 tr|A8J7J8|A8J7J8_CHLRE Eukaryotic initiation factor OS=Chlamydom... 92 2e-17 tr|Q1PEV2|Q1PEV2_ARATH Putative uncharacterized protein OS=Arabi... 88 5e-16 tr|A0MET1|A0MET1_ARATH Putative uncharacterized protein (Fragmen... 88 5e-16 tr|B3S6G8|B3S6G8_TRIAD Putative uncharacterized protein OS=Trich... 80 7e-14 tr|Q54DL9|Q54DL9_DICDI Putative uncharacterized protein OS=Dicty... 79 2e-13 tr|Q4PMA4|Q4PMA4_IXOSC Putative uncharacterized protein (Fragmen... 79 3e-13 tr|A4RZ25|A4RZ25_OSTLU Predicted protein OS=Ostreococcus lucimar... 77 8e-13 tr|Q17G66|Q17G66_AEDAE Translation initiation factor 1A, putativ... 76 1e-12 tr|B7P9A2|B7P9A2_IXOSC Putative uncharacterized protein OS=Ixode... 76 1e-12 tr|B4MTT0|B4MTT0_DROWI GK23772 OS=Drosophila willistoni GN=GK237... 72 3e-11 tr|B4KHD0|B4KHD0_DROMO GI15299 OS=Drosophila mojavensis GN=GI152... 71 4e-11 tr|B4QA37|B4QA37_DROSI GD22725 OS=Drosophila simulans GN=GD22725... 70 1e-10 tr|B4I347|B4I347_DROSE GM18117 OS=Drosophila sechellia GN=GM1811... 70 1e-10 tr|B0W733|B0W733_CULQU Obelix OS=Culex quinquefasciatus GN=CpipJ... 69 3e-10 tr|B6N3N2|B6N3N2_BRAFL Putative uncharacterized protein OS=Branc... 68 4e-10 tr|A7UV64|A7UV64_ANOGA AGAP010181-PA (Fragment) OS=Anopheles gam... 67 8e-10 tr|A1DDZ4|A1DDZ4_NEOFI Eukaryotic initiation factor 1A, putative... 67 8e-10 tr|B3MUE5|B3MUE5_DROAN GF24643 OS=Drosophila ananassae GN=GF2464... 67 1e-09 tr|B0Y144|B0Y144_ASPFC Putative uncharacterized protein OS=Asper... 65 2e-09 tr|A4D9H9|A4D9H9_ASPFU Eukaryotic translation initation factor e... 65 2e-09 tr|B4NYG4|B4NYG4_DROYA GE14789 OS=Drosophila yakuba GN=GE14789 P... 65 3e-09 tr|A9VA63|A9VA63_MONBE Predicted protein OS=Monosiga brevicollis... 65 3e-09
>tr|A9TAI9|A9TAI9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220383 PE=4 SV=1 Length = 170
Score = 141 bits (356), Expect = 3e-32 Identities = 70/157 (44%), Positives = 103/157 (65%), Gaps = 2/157 (1%) Frame = +3
Query: 51 GRKKLKQGAL-NGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIR 227 GRK LK+ AL NG E G + RV+ LRG NI+E E+ TLCLLPAKF K +W++ Sbjct: 4 GRKNLKRDALLNGVEEPTAGHVLMRVVGLRGGNIVEAENAAGENTLCLLPAKFQKTIWVK 63
Query: 228 KGSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLT-WPTCFEDSKTRPHSQR 404 G+ V+V+E DRE+A+E+G+KVTG + +VL E+Q R+L+KS++ WP F+D + + + Sbjct: 64 TGTIVIVDEADREKAIEAGSKVTGTVTRVLLEDQARALRKSVSWWPESFKDERV---ASK 120
Query: 405 EGNNSKDNVEKASNNDESCCDVDNDNLPPLESNQNRR 515 + +D + E C+ D+D LPPLE+N NR+ Sbjct: 121 DAKGERDG--DGGESGEESCESDDDGLPPLEANLNRK 155
>tr|A9NMM1|A9NMM1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 139 bits (351), Expect = 1e-31 Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 1/157 (0%) Frame = +3
Query: 45 GGGRKKLKQGALNGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWI 224 G GRK K+ AL E+ GQT+ +V+S RGSN+IEV D+ TL L PAKF+K LWI Sbjct: 2 GRGRKNSKKEALEACFEIPEGQTVMQVVSSRGSNLIEVMDDTGFKTLALFPAKFHKSLWI 61
Query: 225 RKGSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQR 404 ++G++V+VEE DRERALE+GNKVT I QVLFEEQ+R+L+KS WP F K + Sbjct: 62 KRGNYVLVEESDRERALEAGNKVTCAIVQVLFEEQVRTLRKSSRWPQGFNVDKRSAVTAT 121
Query: 405 EGNNSKDNVEKASNNDESCCDVDND-NLPPLESNQNR 512 G+++ + + E + +D LPPLE+N NR Sbjct: 122 AGSDANVHKLDLHSEKEQYEEYSSDEGLPPLEANCNR 158
>tr|Q7XJP1|Q7XJP1_ARATH Putative translation initiation factor OS=Arabidopsis thaliana GN=At2g40780 PE=2 SV=1 Length = 171
Score = 130 bits (327), Expect = 6e-29 Identities = 67/154 (43%), Positives = 99/154 (64%) Frame = +3
Query: 51 GRKKLKQGALNGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIRK 230 GR+ LKQ A + L+ Q+I +V+SLRGSN IE+ D +L L PAKF + +WIR+ Sbjct: 4 GRRNLKQAASDQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMWIRR 63
Query: 231 GSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQREG 410 GSFVV++ +E+A ESG+KVT I+C+VLF EQ+R L+KS WP F+D++ P + Sbjct: 64 GSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTRPIPAEK--- 120
Query: 411 NNSKDNVEKASNNDESCCDVDNDNLPPLESNQNR 512 +E+ ++ E D+D +PPL++N NR Sbjct: 121 ---SSPIEQHEDDGEVDSSDDDDGMPPLQANTNR 151
>tr|Q8GZX2|Q8GZX2_ORYSJ Os03g0114200 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0090O10.11 PE=2 SV=1 Length = 167
Score = 127 bits (320), Expect = 4e-28 Identities = 62/155 (40%), Positives = 97/155 (62%) Frame = +3
Query: 51 GRKKLKQGALNGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIRK 230 GRK L++ G L G++I +V++LRGSN+IEV D +L L PAKF K WI+ Sbjct: 4 GRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFWIKN 63
Query: 231 GSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQREG 410 G+FVVV+ R++ALESG+K+ ++ QVLF +Q+R+++KS WP F+ + Sbjct: 64 GNFVVVDASGRDQALESGSKIACVVSQVLFHDQVRAMEKSEEWPAIFKSTSKEGSEAGTQ 123
Query: 411 NNSKDNVEKASNNDESCCDVDNDNLPPLESNQNRR 515 ++ +E+ ++DE +D+LPPLE+N NR+ Sbjct: 124 EGTRPQIEEEPDSDE------DDDLPPLEANTNRQ 152
>tr|A3ADF4|A3ADF4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008826 PE=4 SV=1 Length = 230
Score = 127 bits (320), Expect = 4e-28 Identities = 62/155 (40%), Positives = 97/155 (62%) Frame = +3
Query: 51 GRKKLKQGALNGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIRK 230 GRK L++ G L G++I +V++LRGSN+IEV D +L L PAKF K WI+ Sbjct: 4 GRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFWIKN 63
Query: 231 GSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQREG 410 G+FVVV+ R++ALESG+K+ ++ QVLF +Q+R+++KS WP F+ + Sbjct: 64 GNFVVVDASGRDQALESGSKIACVVSQVLFHDQVRAMEKSEEWPAIFKSTSKEGSEAGTQ 123
Query: 411 NNSKDNVEKASNNDESCCDVDNDNLPPLESNQNRR 515 ++ +E+ ++DE +D+LPPLE+N NR+ Sbjct: 124 EGTRPQIEEEPDSDE------DDDLPPLEANTNRQ 152
>tr|A2XBQ5|A2XBQ5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09718 PE=4 SV=1 Length = 167
Score = 127 bits (320), Expect = 4e-28 Identities = 62/155 (40%), Positives = 97/155 (62%) Frame = +3
Query: 51 GRKKLKQGALNGGSELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIRK 230 GRK L++ G L G++I +V++LRGSN+IEV D +L L PAKF K WI+ Sbjct: 4 GRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFWIKN 63
Query: 231 GSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQREG 410 G+FVVV+ R++ALESG+K+ ++ QVLF +Q+R+++KS WP F+ + Sbjct: 64 GNFVVVDASGRDQALESGSKIACVVSQVLFHDQVRAMEKSEEWPAIFKSTSKEGSEAGTQ 123
Query: 411 NNSKDNVEKASNNDESCCDVDNDNLPPLESNQNRR 515 ++ +E+ ++DE +D+LPPLE+N NR+ Sbjct: 124 EGTRPQIEEEPDSDE------DDDLPPLEANTNRQ 152
>tr|B6TAS4|B6TAS4_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 Length = 170
Score = 126 bits (317), Expect = 9e-28 Identities = 66/155 (42%), Positives = 98/155 (63%), Gaps = 1/155 (0%) Frame = +3
Query: 51 GRKKLKQGALNGGS-ELQPGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIR 227 GRK L++ G + L G++I +V++LRGSN+IEV D +L L PAKF K WI+ Sbjct: 4 GRKNLRRACDEGAAVTLAEGESIMQVLTLRGSNVIEVMDGVGVRSLALFPAKFQKSFWIK 63
Query: 228 KGSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPHSQRE 407 GSFVVV+ R++ALESG+K+ ++ +VLF EQ+R+L+KS WP F + T E Sbjct: 64 NGSFVVVDASGRDQALESGSKIACVVSRVLFHEQVRALQKSGNWPAIFNSAPT----PNE 119
Query: 408 GNNSKDNVEKASNNDESCCDVDNDNLPPLESNQNR 512 + + + A ++E D ++D+LPPLE+N NR Sbjct: 120 ASEAGAEAQAAQVDEEPDSDEEDDDLPPLEANTNR 154
>tr|B6U8C3|B6U8C3_MAIZE RNA binding protein OS=Zea mays PE=2 SV=1 Length = 130
Score = 98.2 bits (243), Expect = 3e-19 Identities = 48/111 (43%), Positives = 71/111 (63%) Frame = +3
Query: 180 TLCLLPAKFNKILWIRKGSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTW 359 +L L PAKF K WI+ GSFVVV+ R++ALESG+K+ ++ +VLF EQ+R+L+KS W Sbjct: 8 SLALFPAKFQKSFWIKNGSFVVVDASGRDQALESGSKIACVVSRVLFHEQVRALQKSGNW 67
Query: 360 PTCFEDSKTRPHSQREGNNSKDNVEKASNNDESCCDVDNDNLPPLESNQNR 512 P F + T E + + + A ++E D ++D+LPPLE+N NR Sbjct: 68 PAIFNSAPT----PNEASEAGAEAQAAQVDEEPDSDEEDDDLPPLEANTNR 114
>tr|A8J7J8|A8J7J8_CHLRE Eukaryotic initiation factor OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_192348 PE=4 SV=1 Length = 197
Score = 92.4 bits (228), Expect = 2e-17 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 26/166 (15%) Frame = +3
Query: 102 PGQTIRRVISLRGSNIIEVEDEGNATTLCLLPAKFNKILWIRKGSFVVVEEGDRERALES 281 PGQ I R + RGSN+IEVE TL L+PAKFNK LW+++G FV+VE+ + E Sbjct: 21 PGQAIVRALGSRGSNVIEVEFPDGRQTLVLMPAKFNKKLWVKRGGFVMVEDSAQ---AEG 77
Query: 282 GNKVTGIICQVLFEEQIRSLKK-SLTWPTCF-EDSKT-----RPHSQREGNNSKDNVEKA 440 KVTG I VL+++QI+ L+K WP F +D K P S E ++ ++ A Sbjct: 78 DTKVTGTIVSVLYDDQIKQLQKMEGVWPKEFAKDGKASLEDMMPPSDSEESDQEEGQAGA 137
Query: 441 S-------------------NNDESCCDVDNDNLPPLESNQNRRAM 521 S +E + D+D LPPL+ N NR+ + Sbjct: 138 SAAAVAGAAKAVAAPHGGDHGEEEGEEEDDDDGLPPLQQNTNRKVV 183
>tr|Q1PEV2|Q1PEV2_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At2g40780 PE=4 SV=1 Length = 113
Score = 87.8 bits (216), Expect = 5e-16 Identities = 42/99 (42%), Positives = 65/99 (65%) Frame = +3
Query: 216 LWIRKGSFVVVEEGDRERALESGNKVTGIICQVLFEEQIRSLKKSLTWPTCFEDSKTRPH 395 +WIR+GSFVV++ +E+A ESG+KVT I+C+VLF EQ+R L+KS WP F+D++ P Sbjct: 1 MWIRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTRPIPA 60
Query: 396 SQREGNNSKDNVEKASNNDESCCDVDNDNLPPLESNQNR 512 + +E+ ++ E D+D +PPL++N NR Sbjct: 61 EK------SSPIEQHEDDGEVDSSDDDDGMPPLQANTNR 93
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