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NBDC - LSDB Archive
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DK954963
Clone id TST39A01NGRL0021_N12
Library
Length 376
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_N12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTTTTTGGGTGATGATGGGGCATGCTCTTTAACTGTACATTGTTTCCCTAACACAACGTG
AGCTGAACACTCTGGAATGGCGGCCCTGTGTTGTGCCAGCATCCCTCTGGCCGTCTGTAC
CTGCACGAGCTGCTGCTCCGCTTCAACCAGTATCAACCCCCTTCTCCCTAACTCCACCTT
CCACGCATTACCATCACTGTACTTACCGTCCAGACATGGGTCATCACACAAACCCTGGGT
CGCACGATCACAGTTAACTACCTGCCTAAGTGGACAATTGCGTCCCTGGAAACTCGCTCG
GATTTCCTCGTCCCCCTCTTCTGCAAGTGTGGGCGAACTCAAATGCCTACGATTCCCTTC
CTTCTGAAATGACCTT
■■Homology search results ■■ -
sp_hit_id Q6ZRI6
Definition sp|Q6ZRI6|CO039_HUMAN Uncharacterized protein C15orf39 OS=Homo sapiens
Align length 29
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954963|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_N12, 5'
         (376 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZRI6|CO039_HUMAN Uncharacterized protein C15orf39 OS=Homo s...    34   0.26 
sp|Q63955|PO4F3_MOUSE POU domain, class 4, transcription factor ...    33   0.57 
sp|Q9UPA5|BSN_HUMAN Protein bassoon OS=Homo sapiens GN=BSN PE=1 ...    32   0.75 
sp|P10180|CUT_DROME Homeobox protein cut OS=Drosophila melanogas...    32   1.3  
sp|P36011|STUA_EMENI Cell pattern formation-associated protein s...    31   1.7  
sp|Q9VEX0|SULF1_DROME Extracellular sulfatase SULF-1 homolog OS=...    31   2.2  
sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member...    31   2.2  
sp|Q9V3A4|CSUP_DROME Protein catecholamines up OS=Drosophila mel...    31   2.2  
sp|Q6MWG9|FH18_ORYSJ Formin-like protein 18 OS=Oryza sativa subs...    30   3.7  
sp|Q03057|YD544_YEAST Putative uncharacterized protein YDR544C O...    30   4.9  
sp|Q15319|PO4F3_HUMAN POU domain, class 4, transcription factor ...    30   4.9  
sp|Q5FQM6|Y1579_GLUOX UPF0090 protein GOX1579 OS=Gluconobacter o...    29   6.3  
sp|Q13472|TOP3A_HUMAN DNA topoisomerase 3-alpha OS=Homo sapiens ...    29   6.3  
sp|Q6C553|HIR1_YARLI Protein HIR1 OS=Yarrowia lipolytica GN=HIR1...    29   6.3  
sp|Q0UNC6|HIR1_PHANO Protein HIR1 OS=Phaeosphaeria nodorum GN=HI...    29   6.3  
sp|Q4IBR4|HIR1_GIBZE Protein HIR1 OS=Gibberella zeae GN=HIR1 PE=...    29   6.3  
sp|A1L1J6|ZN652_RAT Zinc finger protein 652 OS=Rattus norvegicus...    29   8.3  
sp|Q5DU09|ZN652_MOUSE Zinc finger protein 652 OS=Mus musculus GN...    29   8.3  
sp|Q9Y815|RSV2_SCHPO Zinc finger protein rsv2 OS=Schizosaccharom...    29   8.3  
sp|Q8TCT7|PSL1_HUMAN Signal peptide peptidase-like 2B OS=Homo sa...    29   8.3  
sp|P98092|HMCT_BOMMO Hemocytin OS=Bombyx mori PE=2 SV=1                29   8.3  
sp|Q2GSJ9|HIR1_CHAGB Protein HIR1 OS=Chaetomium globosum GN=HIR1...    29   8.3  
sp|P13983|EXTN_TOBAC Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE...    29   8.3  

>sp|Q6ZRI6|CO039_HUMAN Uncharacterized protein C15orf39 OS=Homo
           sapiens GN=C15orf39 PE=1 SV=2
          Length = 1047

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 81  RPCVVPASLWPSVPARAAAPLQPVSTPFS 167
           RP  +PA++ PS P  A AP QP  TP S
Sbjct: 658 RPAPLPAAVVPSTPTSAPAPTQPAPTPTS 686


>sp|Q63955|PO4F3_MOUSE POU domain, class 4, transcription factor 3
           OS=Mus musculus GN=Pou4f3 PE=2 SV=1
          Length = 338

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = +3

Query: 114 SVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNP-------GSHDHS*LPA 266
           SVP  + +P  P+S P +LT    H  H     D+  H +P       G+ +HS +PA
Sbjct: 85  SVPCTSTSPTVPISHPAALTSHPHHAVHQGLEGDLLEHISPTLSVSGLGAPEHSVMPA 142


>sp|Q9UPA5|BSN_HUMAN Protein bassoon OS=Homo sapiens GN=BSN PE=1 SV=3
          Length = 3926

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 23/68 (33%), Positives = 27/68 (39%)
 Frame = +3

Query: 48   LTQRELNTLEWRPCVVPASLWPSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHH 227
            L+  ELN L  + C  PA  +   PA AAAP  P S P +   P        Y    G  
Sbjct: 3012 LSDSELNQLRLQGCTTPAGQFVDFPATAAAPATP-SGPTAFQQPRFQPPAPQYSAGSGGP 3070

Query: 228  TNPGSHDH 251
            T  G   H
Sbjct: 3071 TQNGFPAH 3078


>sp|P10180|CUT_DROME Homeobox protein cut OS=Drosophila melanogaster
           GN=ct PE=1 SV=1
          Length = 2175

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 186 HYHHCTYRPDMGHHTNPGSHDH 251
           H+HH   +P+ G ++NP S+DH
Sbjct: 692 HHHHLQQQPNSGSNSNPASNDH 713


>sp|P36011|STUA_EMENI Cell pattern formation-associated protein stuA
           OS=Emericella nidulans GN=stuA PE=2 SV=2
          Length = 622

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 5/84 (5%)
 Frame = +3

Query: 126 RAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS*LPA*VDNCVPGNSLGF 305
           R   P   V TP +  PPS H HH    P   H + PG                  +  F
Sbjct: 250 RLEGPQPVVRTPQAQQPPSLH-HHSLQTPVPSHMSQPGGRPSL-----------DRAHTF 297

Query: 306 PRPP-----LLQVWANSNAYDSLP 362
           P PP     L+ + + +N+YD  P
Sbjct: 298 PTPPASASSLIGITSQNNSYDWNP 321


>sp|Q9VEX0|SULF1_DROME Extracellular sulfatase SULF-1 homolog
           OS=Drosophila melanogaster GN=Sulf1 PE=1 SV=1
          Length = 1114

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
 Frame = -2

Query: 321 EEGDEEIRASFQGRN-CPLRQVVNCDRATQGLCDDPCLDGKYSDGNAWK 178
           EEGDEE+   FQ  N  PL   +         C DP L      G  WK
Sbjct: 522 EEGDEELDQEFQQNNDLPLAPYITKMMRLNSECSDPALLKNCLPGQKWK 570


>sp|A6NGB9|WIPF3_HUMAN WAS/WASL-interacting protein family member 3
           OS=Homo sapiens GN=WIPF3 PE=2 SV=3
          Length = 483

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/76 (27%), Positives = 31/76 (40%)
 Frame = +3

Query: 90  VVPASLWPSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS*LPA* 269
           ++P   +P + A  A+P Q    P +  PP   Y  C+ R  +     PG +  S  P  
Sbjct: 266 LLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPP- 324

Query: 270 VDNCVPGNSLGFPRPP 317
               +P  S  F  PP
Sbjct: 325 ---PLPPKSPSFQAPP 337


>sp|Q9V3A4|CSUP_DROME Protein catecholamines up OS=Drosophila
           melanogaster GN=Catsup PE=1 SV=1
          Length = 449

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 174 PPSTHYHHCTYRPDMGHHTNPGSHDH 251
           P + H+HH  +  D GHH +   HDH
Sbjct: 60  PRAEHHHHHDHDHDHGHHHHGHDHDH 85


>sp|Q6MWG9|FH18_ORYSJ Formin-like protein 18 OS=Oryza sativa subsp.
           japonica GN=FH18 PE=2 SV=1
          Length = 906

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +3

Query: 111 PSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNP 236
           P+ P   A P  P   P    PPS H+HH       GHH  P
Sbjct: 273 PAAPPPPAGPPPPAPPPL---PPSHHHHH-------GHHPPP 304


>sp|Q03057|YD544_YEAST Putative uncharacterized protein YDR544C
           OS=Saccharomyces cerevisiae GN=YDR544C PE=5 SV=1
          Length = 142

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +3

Query: 81  RPCVVPASLWPSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS 254
           RPC+ P+S+  S        +   +TP   TP  TH+ H T  P    HT+  + + S
Sbjct: 4   RPCLTPSSMQYS-------DIYIHTTPHPHTPHHTHHTHTTPTPTPHPHTHTPTPERS 54
tr_hit_id B3NQ43
Definition tr|B3NQ43|B3NQ43_DROER GG22917 OS=Drosophila erecta
Align length 35
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954963|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_N12, 5'
         (376 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3NQ43|B3NQ43_DROER GG22917 OS=Drosophila erecta GN=GG22917 P...    35   1.4  
tr|B0DY27|B0DY27_LACBS Predicted protein OS=Laccaria bicolor (st...    35   1.4  
tr|A4I4W2|A4I4W2_LEIIN Putative uncharacterized protein OS=Leish...    35   1.9  
tr|A8LF92|A8LF92_FRASN Putative uncharacterized protein OS=Frank...    35   2.4  
tr|Q9QEJ3|Q9QEJ3_9GAMA Trucnated type 2 EBNA2 OS=Macacine herpes...    34   3.2  
tr|Q5KET0|Q5KET0_CRYNE Putative uncharacterized protein OS=Crypt...    34   3.2  
tr|Q55RD9|Q55RD9_CRYNE Putative uncharacterized protein OS=Crypt...    34   3.2  
tr|A3LNF1|A3LNF1_PICST Putative uncharacterized protein OS=Pichi...    34   3.2  
tr|A2EGX8|A2EGX8_TRIVA Putative uncharacterized protein OS=Trich...    34   4.1  
tr|Q53CR7|Q53CR7_9GAMA JM153 OS=Macaca fuscata rhadinovirus GN=J...    34   4.1  
tr|Q9NPN3|Q9NPN3_HUMAN Putative uncharacterized protein (Fragmen...    34   4.1  
tr|Q2VPA3|Q2VPA3_HUMAN C15orf39 protein (Fragment) OS=Homo sapie...    34   4.1  
tr|B4E3C6|B4E3C6_HUMAN cDNA FLJ55915 OS=Homo sapiens PE=2 SV=1         34   4.1  
tr|B0DMU7|B0DMU7_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.1  
tr|B3MD94|B3MD94_DROAN GF13442 OS=Drosophila ananassae GN=GF1344...    33   5.4  
tr|B3M2B3|B3M2B3_DROAN GF17078 OS=Drosophila ananassae GN=GF1707...    33   5.4  
tr|Q7S6Q4|Q7S6Q4_NEUCR Predicted protein OS=Neurospora crassa GN...    33   7.0  
tr|A6S2I0|A6S2I0_BOTFB Putative uncharacterized protein OS=Botry...    33   7.0  
tr|A6H6N6|A6H6N6_MOUSE Pou4f3 protein OS=Mus musculus GN=Pou4f3 ...    33   9.2  
tr|Q9VJ69|Q9VJ69_DROME CG31790 OS=Drosophila melanogaster GN=CG3...    33   9.2  
tr|Q8MSR8|Q8MSR8_DROME SD02507p OS=Drosophila melanogaster GN=CG...    33   9.2  
tr|Q16SD6|Q16SD6_AEDAE Putative uncharacterized protein OS=Aedes...    33   9.2  
tr|B6GYW2|B6GYW2_PENCH Pc12g08950 protein OS=Penicillium chrysog...    33   9.2  

>tr|B3NQ43|B3NQ43_DROER GG22917 OS=Drosophila erecta GN=GG22917 PE=4
           SV=1
          Length = 668

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/35 (57%), Positives = 20/35 (57%)
 Frame = +3

Query: 111 PSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPD 215
           PS P  AAAP  P  TP    P STH H  TYRPD
Sbjct: 90  PSAPVAAAAPKSP-KTP---EPRSTHTHSHTYRPD 120


>tr|B0DY27|B0DY27_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_334094 PE=4 SV=1
          Length = 579

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +3

Query: 84  PCVVPASLWPSVPARAA-APLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNP 236
           PC+ P+   PSVP  +  AP   +  P SL PPS  +   +  P + HH+ P
Sbjct: 162 PCLPPSFFPPSVPLPSLHAPSLSIPPPLSLPPPSLPHSLPSITPSLLHHSLP 213


>tr|A4I4W2|A4I4W2_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ29.2840 PE=4 SV=1
          Length = 846

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 54  QRELNTLEWRPCVVPASLWPSVPA---RAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGH 224
           QR  ++ E R  V  AS  PSVP    +  +   P ++ F   PPS H H     PD   
Sbjct: 394 QRSAHSAEAR--VAKASATPSVPLDREKMPSAATPSASSFKAKPPSPHSHATVAAPDSPT 451

Query: 225 HTNPGSHDHS 254
           HT   S+  S
Sbjct: 452 HTGSASYKGS 461


>tr|A8LF92|A8LF92_FRASN Putative uncharacterized protein OS=Frankia
           sp. (strain EAN1pec) GN=Franean1_0371 PE=4 SV=1
          Length = 569

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 161 LLPNSTFHALPSLYLPSRHGSSHKPWVARSQLTTCLSGQLRPWKLAR 301
           +LP      +P+ + P R G +H  WV   Q+    SGQ+RP +LAR
Sbjct: 112 ILPAPEIGPVPARHRPERAGQAHPEWVRPEQVR---SGQVRPAELAR 155


>tr|Q9QEJ3|Q9QEJ3_9GAMA Trucnated type 2 EBNA2 OS=Macacine
           herpesvirus 4 PE=4 SV=1
          Length = 464

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = +3

Query: 111 PSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNP 236
           P  P +A  PL PVS P   T   T  HH   RPD   HT P
Sbjct: 128 PQAPQQATGPLLPVSGP---TMHPTPLHHAPPRPDPPPHTPP 166


>tr|Q5KET0|Q5KET0_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNF04390 PE=4 SV=1
          Length = 667

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 25/71 (35%), Positives = 31/71 (43%)
 Frame = +3

Query: 138 PLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS*LPA*VDNCVPGNSLGFPRPP 317
           P  P S P    PPS++YH  + RP     ++P  H HS  P       PG  L  PRP 
Sbjct: 430 PYPPYSAPGYPPPPSSNYHVNSGRPSTNPESSPSRHRHSLPP-------PGYVLD-PRPI 481

Query: 318 LLQVWANSNAY 350
            L      +AY
Sbjct: 482 PLPSSHGHHAY 492


>tr|Q55RD9|Q55RD9_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBF0520 PE=4 SV=1
          Length = 534

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 25/71 (35%), Positives = 31/71 (43%)
 Frame = +3

Query: 138 PLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS*LPA*VDNCVPGNSLGFPRPP 317
           P  P S P    PPS++YH  + RP     ++P  H HS  P       PG  L  PRP 
Sbjct: 297 PYPPYSAPGYPPPPSSNYHVNSGRPSTNPESSPSRHRHSLPP-------PGYVLD-PRPI 348

Query: 318 LLQVWANSNAY 350
            L      +AY
Sbjct: 349 PLPSSHGHHAY 359


>tr|A3LNF1|A3LNF1_PICST Putative uncharacterized protein OS=Pichia
           stipitis GN=PICST_29570 PE=4 SV=2
          Length = 442

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = +3

Query: 84  PCVVPASLWPSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDH 251
           P   PA   P  P    AP  P + P    P   HYH   + P   HH +P  H H
Sbjct: 248 PPAPPAPPAPPAPPAPPAPPAPPAPPAPGEPAPPHYHP-PHHPHPPHHPHPPHHPH 302


>tr|A2EGX8|A2EGX8_TRIVA Putative uncharacterized protein
            OS=Trichomonas vaginalis G3 GN=TVAG_497360 PE=4 SV=1
          Length = 1819

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +1

Query: 178  LPRITITVLTVQTWVITQTLGRTITVNYLPKWTIASLETRSDFLVPLFCKCGRTQMPT 351
            LP  T+T++T  T   T+ +G TITV+YLP  T + L T S  L P      RT +PT
Sbjct: 1581 LPSTTVTLVT-STLTETKQIGETITVSYLPVPTKSPLPTHSP-LPP------RTPIPT 1630


>tr|Q53CR7|Q53CR7_9GAMA JM153 OS=Macaca fuscata rhadinovirus
           GN=JM153 PE=4 SV=1
          Length = 436

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 22/69 (31%), Positives = 27/69 (39%)
 Frame = +3

Query: 111 PSVPARAAAPLQPVSTPFSLTPPSTHYHHCTYRPDMGHHTNPGSHDHS*LPA*VDNCVPG 290
           P  PA  + P  P S P  L+P     HH +  P       P  HD    P    +  P 
Sbjct: 132 PGSPASHSPPPSPPSHPAPLSPAPPSSHHPSPDPQPPSFLQPLPHDSPEPPGPPTSSPPP 191

Query: 291 NSLGFPRPP 317
           NS G P+ P
Sbjct: 192 NSPGPPQSP 200