DK954899 |
Clone id |
TST39A01NGRL0021_K20 |
Library |
TST39 |
Length |
560 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_K20. 5' end sequence. |
Accession |
DK954899 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTCGAGCGCTTCGACGCGAGCATTCACTTGTCGCTGCTTCATGTCAGATCTGGAAATACA GATCCCCACCTCCTTTGATCCATTCAAAGAAGCAACAAATGCAAGCACGCCAGGAACCGG ATCAAAGGACAACGTGCATGTGCGTATTCAGCAGCGGAATGGCAGGAAGAGCCTAACAAC AGTGCAGGGCCTCAATAAGGAATTCAATTACAACAAGATTCTCAAGGATTTCAAAAAGGA GTTTTGTTGCAATGGCACTGTTGTACAAGATCCTGAACTGGGCCAGGTGATTCAGCTCCA AGGAGACCAAAGGAAGAATGTATCGCAATTTCTTGTACAGGCAGGGGTTGTGAAAAAGGA CCAAATCAAAATCCATGGTTTCTAGATGATAGTGCTCAAAAGCTGACCTAATTTGGTTGG CCTAATATATATAATTAATGAGCTAGAGATTTGTATGTGCTAAATATATAAAGCAATACC AACAGCAAGACTCAGACATAAAACAGATAAGAGGTAAGGTCCATAAATATGATTACATTA TCATACAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SM41 |
Definition |
sp|Q9SM41|SUI1_SPOST Protein translation factor SUI1 homolog OS=Sporobolus stapfianus |
Align length |
116 |
Score (bit) |
192.0 |
E-value |
9.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8B6X0 |
Definition |
tr|B8B6X0|B8B6X0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
122 |
Score (bit) |
194.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954899|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_K20, 5' (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8B6X0|B8B6X0_ORYSI Putative uncharacterized protein OS=Oryza... 194 2e-48 tr|A3BKK0|A3BKK0_ORYSJ Putative uncharacterized protein OS=Oryza... 194 2e-48 tr|B3TM00|B3TM00_ELAGV Translational initiation factor eIF1 OS=E... 192 1e-47 tr|Q71R35|Q71R35_ORYCO Translational initiation factor eIF1 OS=O... 192 1e-47 tr|B7F683|B7F683_ORYSJ cDNA clone:J013170I05, full insert sequen... 192 1e-47 tr|B6VAI6|B6VAI6_ORYSI Translation initiation factor eIF1 OS=Ory... 192 1e-47 tr|Q8RVJ0|Q8RVJ0_PINPS Putative translation factor OS=Pinus pina... 191 2e-47 tr|A9XNZ1|A9XNZ1_9MYRT Putative translation factor (Fragment) OS... 191 2e-47 tr|A9XNZ0|A9XNZ0_9MYRT Putative translation factor (Fragment) OS... 191 2e-47 tr|A9XNY8|A9XNY8_9MYRT Putative translation factor (Fragment) OS... 191 2e-47 tr|A9NK09|A9NK09_PICSI Putative uncharacterized protein OS=Picea... 191 2e-47 tr|B6TVN6|B6TVN6_MAIZE Protein translation factor SUI1 OS=Zea ma... 191 3e-47 tr|B3TLY4|B3TLY4_ELAGV Translational initiation factor eIF1 OS=E... 191 3e-47 tr|B4FFG3|B4FFG3_MAIZE Protein translation factor SUI1 OS=Zea ma... 190 5e-47 tr|A9XNY9|A9XNY9_9MYRT Putative translation factor (Fragment) OS... 190 5e-47 tr|Q09PG4|Q09PG4_9ROSI Putative uncharacterized protein OS=Viola... 189 6e-47 tr|Q84LW8|Q84LW8_COFAR SUI1 protein OS=Coffea arabica GN=sui1 PE... 189 8e-47 tr|Q38JG3|Q38JG3_SOLTU Putative uncharacterized protein OS=Solan... 189 8e-47 tr|Q84LW9|Q84LW9_COFAR SUI1 protein OS=Coffea arabica GN=sui1 PE... 189 1e-46 tr|Q5ZBT6|Q5ZBT6_ORYSJ Putative translation initiation factor OS... 189 1e-46 tr|B8AZK8|B8AZK8_ORYSI Putative uncharacterized protein OS=Oryza... 189 1e-46 tr|B8AAU0|B8AAU0_ORYSI Putative uncharacterized protein OS=Oryza... 189 1e-46 tr|Q8LRM9|Q8LRM9_WHEAT Translation initiation factor OS=Triticum... 186 5e-46 tr|Q6L4U9|Q6L4U9_ORYSJ Os05g0498400 protein OS=Oryza sativa subs... 186 5e-46 tr|B4FLV6|B4FLV6_MAIZE Protein translation factor SUI1 OS=Zea ma... 186 7e-46 tr|B6SIX5|B6SIX5_MAIZE Protein translation factor SUI1 OS=Zea ma... 186 9e-46 tr|A9PGM8|A9PGM8_POPTR Putative uncharacterized protein OS=Popul... 186 9e-46 tr|A9P9X9|A9P9X9_POPTR Putative uncharacterized protein OS=Popul... 186 9e-46 tr|A9PDG1|A9PDG1_POPTR Putative uncharacterized protein OS=Popul... 184 3e-45 tr|A9NTS5|A9NTS5_PICSI Putative uncharacterized protein OS=Picea... 182 1e-44
>tr|B8B6X0|B8B6X0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26284 PE=4 SV=1 Length = 843
Score = 194 bits (494), Expect = 2e-48 Identities = 100/122 (81%), Positives = 106/122 (86%), Gaps = 2/122 (1%) Frame = +2
Query: 23 FTCRCFMSDLEIQIPTSFDPFKEATNASTPGT--GSKDNVHVRIQQRNGRKSLTTVQGLN 196 F + FMSDL+IQIPT+FDPF EA NA G GSKD VHVRIQQRNGRKSLTTVQGL Sbjct: 723 FHQQSFMSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLK 781
Query: 197 KEFNYNKILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIH 376 KEF+YNKILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKK+ IKIH Sbjct: 782 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIH 841
Query: 377 GF 382 GF Sbjct: 842 GF 843
>tr|A3BKK0|A3BKK0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023572 PE=4 SV=1 Length = 764
Score = 194 bits (494), Expect = 2e-48 Identities = 100/122 (81%), Positives = 106/122 (86%), Gaps = 2/122 (1%) Frame = +2
Query: 23 FTCRCFMSDLEIQIPTSFDPFKEATNASTPGT--GSKDNVHVRIQQRNGRKSLTTVQGLN 196 F + FMSDL+IQIPT+FDPF EA NA G GSKD VHVRIQQRNGRKSLTTVQGL Sbjct: 644 FHQQSFMSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLK 702
Query: 197 KEFNYNKILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIH 376 KEF+YNKILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKK+ IKIH Sbjct: 703 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIH 762
Query: 377 GF 382 GF Sbjct: 763 GF 764
>tr|B3TM00|B3TM00_ELAGV Translational initiation factor eIF1 OS=Elaeis guineensis var. tenera PE=4 SV=1 Length = 113
Score = 192 bits (488), Expect = 1e-47 Identities = 94/114 (82%), Positives = 103/114 (90%) Frame = +2
Query: 41 MSDLEIQIPTSFDPFKEATNASTPGTGSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYNKI 220 MSDL++QIPT+FDPF EA NA G G+K+ VHVRIQQRNGRKSLTTVQGL KEF+YNKI Sbjct: 1 MSDLDVQIPTAFDPFAEA-NADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKI 59
Query: 221 LKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 LKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNV+ FLVQAG+VKK+ IKIHGF Sbjct: 60 LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKEHIKIHGF 113
>tr|Q71R35|Q71R35_ORYCO Translational initiation factor eIF1 OS=Oryza coarctata PE=4 SV=1 Length = 115
Score = 192 bits (487), Expect = 1e-47 Identities = 98/116 (84%), Positives = 103/116 (88%), Gaps = 2/116 (1%) Frame = +2
Query: 41 MSDLEIQIPTSFDPFKEATNASTPGT--GSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYN 214 MSDL+IQIPT+FDPF EA NA G GSKD VHVRIQQRNGRKSLTTVQGL KEF+YN Sbjct: 1 MSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYN 59
Query: 215 KILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 KILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKK+ IKIHGF Sbjct: 60 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>tr|B7F683|B7F683_ORYSJ cDNA clone:J013170I05, full insert sequence OS=Oryza sativa subsp. japonica PE=4 SV=1 Length = 115
Score = 192 bits (487), Expect = 1e-47 Identities = 98/116 (84%), Positives = 103/116 (88%), Gaps = 2/116 (1%) Frame = +2
Query: 41 MSDLEIQIPTSFDPFKEATNASTPGT--GSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYN 214 MSDL+IQIPT+FDPF EA NA G GSKD VHVRIQQRNGRKSLTTVQGL KEF+YN Sbjct: 1 MSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYN 59
Query: 215 KILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 KILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKK+ IKIHGF Sbjct: 60 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>tr|B6VAI6|B6VAI6_ORYSI Translation initiation factor eIF1 OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 115
Score = 192 bits (487), Expect = 1e-47 Identities = 98/116 (84%), Positives = 103/116 (88%), Gaps = 2/116 (1%) Frame = +2
Query: 41 MSDLEIQIPTSFDPFKEATNASTPGT--GSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYN 214 MSDL+IQIPT+FDPF EA NA G GSKD VHVRIQQRNGRKSLTTVQGL KEF+YN Sbjct: 1 MSDLDIQIPTAFDPFAEA-NAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYN 59
Query: 215 KILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 KILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKK+ IKIHGF Sbjct: 60 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>tr|Q8RVJ0|Q8RVJ0_PINPS Putative translation factor OS=Pinus pinaster PE=4 SV=1 Length = 113
Score = 191 bits (486), Expect = 2e-47 Identities = 94/114 (82%), Positives = 102/114 (89%) Frame = +2
Query: 41 MSDLEIQIPTSFDPFKEATNASTPGTGSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYNKI 220 MSDL++QIP ++DPF +A NA G GSK+ VHVRIQQRNGRKSLTTVQGL KEF+YNKI Sbjct: 1 MSDLDVQIPGAYDPFADA-NAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLRKEFSYNKI 59
Query: 221 LKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 LKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKKD IKIHGF Sbjct: 60 LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKDNIKIHGF 113
>tr|A9XNZ1|A9XNZ1_9MYRT Putative translation factor (Fragment) OS=Sonneratia apetala PE=4 SV=1 Length = 114
Score = 191 bits (486), Expect = 2e-47 Identities = 92/115 (80%), Positives = 103/115 (89%) Frame = +2
Query: 38 FMSDLEIQIPTSFDPFKEATNASTPGTGSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYNK 217 FM DL+ Q+PT+FDPF +A NA G G+K+ VH+R+QQRNGRKSLTTVQGL KEF+YNK Sbjct: 1 FMVDLDAQVPTAFDPFADA-NAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 59
Query: 218 ILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 ILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKKD+IKIHGF Sbjct: 60 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDRIKIHGF 114
>tr|A9XNZ0|A9XNZ0_9MYRT Putative translation factor (Fragment) OS=Sonneratia ovata PE=4 SV=1 Length = 114
Score = 191 bits (486), Expect = 2e-47 Identities = 92/115 (80%), Positives = 103/115 (89%) Frame = +2
Query: 38 FMSDLEIQIPTSFDPFKEATNASTPGTGSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYNK 217 FM DL+ Q+PT+FDPF +A NA G G+K+ VH+R+QQRNGRKSLTTVQGL KEF+YNK Sbjct: 1 FMVDLDAQVPTAFDPFADA-NAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 59
Query: 218 ILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 ILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKKD+IKIHGF Sbjct: 60 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDRIKIHGF 114
>tr|A9XNY8|A9XNY8_9MYRT Putative translation factor (Fragment) OS=Sonneratia alba PE=4 SV=1 Length = 114
Score = 191 bits (486), Expect = 2e-47 Identities = 92/115 (80%), Positives = 103/115 (89%) Frame = +2
Query: 38 FMSDLEIQIPTSFDPFKEATNASTPGTGSKDNVHVRIQQRNGRKSLTTVQGLNKEFNYNK 217 FM DL+ Q+PT+FDPF +A NA G G+K+ VH+R+QQRNGRKSLTTVQGL KEF+YNK Sbjct: 1 FMVDLDAQVPTAFDPFADA-NAEDSGAGAKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNK 59
Query: 218 ILKDFKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSQFLVQAGVVKKDQIKIHGF 382 ILKD KKEFCCNGTVVQDPELGQVIQLQGDQRKNVS FLVQAG+VKKD+IKIHGF Sbjct: 60 ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDRIKIHGF 114
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