DK954881
Clone id TST39A01NGRL0021_K02
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_K02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGCCGCACAACTTTGTACAAGAAAGTTGGGTTTTTTTTTTTTTTATCTGTTGAGAATTTT
GGAGCTGCATGGCTGGTCATATCTGAGCAGGGTCAAGGACAGGGTTCTTTGGGAGAAGCA
TTGATGGATCTGTATATCCACGTGTAGGGTCGCCTTGTCTCAACCACTGGTGTCAAATAT
GAGTCTTGCATCCTCTTGTAAAGTTTGCCACAAATATGATTTCAAATTAAGGACAGCTAT
GGCTGTTGATACAGAGAGTAGCCTGAGCCGAGGGTGGAGAGCTTGCATGCATAGAGCAGG
CATGTGATGTAATGGCTCCAGTTAACTAGGCATGCTTCAGGTGAATGACTCTGTTGTCTT
CTTGCAGCCAAAACCCTTTTCGAATCAATATAGCATACTTTTAATGATGAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O88799
Definition sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus
Align length 46
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954881|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K02, 5'
(365 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1 30 3.8
sp|Q09630|GRM1_CAEEL Probable metabotropic glutamate receptor mg... 29 8.4
sp|Q9K9C6|BGAL_BACHD Beta-galactosidase OS=Bacillus halodurans G... 29 8.4

>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
Length = 5376

Score = 30.0 bits (66), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1

Query: 281 LTGAITSHACSMHASSPPSAQATLCINSHSCP*FEIIFVANFTRGC 144
L + ++ CS H + ++Q L + C E VANFTRGC
Sbjct: 5214 LGDSFVTNDCSQHCTC--ASQGILLCEPYGCRAGESCMVANFTRGC 5257


>sp|Q09630|GRM1_CAEEL Probable metabotropic glutamate receptor mgl-1
OS=Caenorhabditis elegans GN=mgl-1 PE=2 SV=1
Length = 999

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 9/90 (10%)
Frame = +3

Query: 15 LELHGWSYLSRVKDRVLWEKH*W---------ICISTCRVALSQPLVSNMSLASSCKVCH 167
+E+ WS + ++EK+ W +C C++ + L+ + +C C
Sbjct: 582 VEIGHWSE----NNLTIYEKNLWWDPDHTPVSVCSLPCKIGFRKQLIKDEQCCWACSKCE 637

Query: 168 KYDFKLRTAMAVDTESSLSRGWRACMHRAG 257
Y++ + V E +GW R G
Sbjct: 638 DYEYLINETHCVGCE----QGWWPTKDRKG 663


>sp|Q9K9C6|BGAL_BACHD Beta-galactosidase OS=Bacillus halodurans
GN=lacZ PE=3 SV=1
Length = 1014

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -3

Query: 162 KLYKRMQDSYLTPVVETRRPYTWIYRSINAS 70
+LY++ QD ++ P E P+ W+ + +N S
Sbjct: 652 ELYRKKQDVFVAPQEEVYLPFDWLEQGMNES 682


tr_hit_id Q7PB56
Definition tr|Q7PB56|Q7PB56_RICSI Hypothetical D-alanyl-D-alanine dipeptidase OS=Rickettsia sibirica 246
Align length 28
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954881|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_K02, 5'
(365 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7PB56|Q7PB56_RICSI Hypothetical D-alanyl-D-alanine dipeptida... 33 7.1

>tr|Q7PB56|Q7PB56_RICSI Hypothetical D-alanyl-D-alanine dipeptidase
OS=Rickettsia sibirica 246 GN=rsib_orf.386 PE=4 SV=1
Length = 53

Score = 33.1 bits (74), Expect = 7.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3

Query: 339 SKRVLAARRQQSHSPEACLVNWSHYITC 256
+KR + Q+H+ +AC + W HYITC
Sbjct: 25 AKRNYLCSKMQNHNFKACKIEWWHYITC 52