BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954774|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_F12, 5'
         (585 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5BJK8|GOLI4_RAT Golgi integral membrane protein 4 OS=Rattus ...    32   3.0  
sp|P39057|DYHC_ANTCR Dynein beta chain, ciliary OS=Anthocidaris ...    32   3.0  
sp|B2V4K2|IOLE_CLOBA Inosose dehydratase OS=Clostridium botulinu...    31   3.9  
sp|P18040|ENV_HV2G1 Envelope glycoprotein gp160 OS=Human immunod...    31   5.2  
sp|Q9TC94|YMF16_NEPOL Uncharacterized tatC-like protein ymf16 OS...    30   6.7  
sp|Q6MJE4|MAO1_BDEBA NAD-dependent malic enzyme OS=Bdellovibrio ...    30   6.7  

>sp|Q5BJK8|GOLI4_RAT Golgi integral membrane protein 4 OS=Rattus
           norvegicus GN=Golim4 PE=1 SV=2
          Length = 653

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +2

Query: 362 LHQGKKEGQISRKEPLPMYKAREMVDYHMMKKRIDGLKVITDPKMEYDLRKQFHEGMVDF 541
           LHQ +  GQ+ R++    Y AREM      +K+ D      + + +Y LR+Q H   V+ 
Sbjct: 397 LHQQRLHGQLLRQQQQQQYLAREMA----QQKQADH----EEGQQQYQLRQQAHSDAVE- 447

Query: 542 FKKLQGAYDE 571
               QGA D+
Sbjct: 448 NDVAQGAEDQ 457


>sp|P39057|DYHC_ANTCR Dynein beta chain, ciliary OS=Anthocidaris
            crassispina PE=1 SV=1
          Length = 4466

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = -2

Query: 467  HQCVFSSCDNPPSHEPYTLGEAL---FCLFVPLFSPDEASSMFHNQIHNQ 327
            H+C + SC NP S   +T+   L   FC+F   F   +A S  +N I +Q
Sbjct: 2566 HKCQYVSCMNPTSGS-FTINSRLQRHFCVFALSFPGQDALSTIYNSILSQ 2614


>sp|B2V4K2|IOLE_CLOBA Inosose dehydratase OS=Clostridium botulinum
           (strain Alaska E43 / type E3) GN=iolE PE=3 SV=1
          Length = 298

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
 Frame = +2

Query: 332 YEFDYETWNLLHQG-KKEGQISRKEPLPMYKAREMVDYHMMKKRIDGLKVITDPKMEYDL 508
           Y F+ E WNLL  G  K GQ++  + + +     M       + ID L  +TD  + Y L
Sbjct: 127 YHFNEEEWNLLANGLNKLGQLAADKGMKIVYHHHMGTGVQTTEEIDKLMSVTDENLVYLL 186

Query: 509 RKQFH-----EGMVDFFKK 550
               H     E  V+  KK
Sbjct: 187 FDTGHLVYSGENPVEILKK 205


>sp|P18040|ENV_HV2G1 Envelope glycoprotein gp160 OS=Human
           immunodeficiency virus type 2 (isolate Ghana-1 subtype
           A) GN=env PE=3 SV=1
          Length = 851

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = -3

Query: 532 HTFMELLPQVILHLW-ICNYFKTINAFFHHVIIHHLTSLIHWERLFSAYL 386
           H  + LL +++  L+ IC    + N+  H +I  +LT++  W RL +AYL
Sbjct: 746 HFLIHLLTRLLTGLYKICRDLLSTNSPTHRLISQNLTAIRDWLRLKAAYL 795


>sp|Q9TC94|YMF16_NEPOL Uncharacterized tatC-like protein ymf16
           OS=Nephroselmis olivacea GN=YMF16 PE=3 SV=1
          Length = 247

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = -3

Query: 535 HHTFMELLPQVILHLWICNY---FKTINAFFHHVIIHHLTSLIHWERLFSAYLSLFFPLM 365
           H  F E+      ++++C +   + T   FF+      + S   +ERL   +LS FF  +
Sbjct: 55  HLIFTEMSEAFHTYIFLCFFTSIYCTFPYFFYQFWAFFIPSTYQFERLQLRFLSFFFFTL 114

Query: 364 KQVPCFIIKFI 332
               C II FI
Sbjct: 115 LFFSCIIIYFI 125


>sp|Q6MJE4|MAO1_BDEBA NAD-dependent malic enzyme OS=Bdellovibrio
           bacteriovorus GN=sfcA PE=3 SV=1
          Length = 565

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = -3

Query: 571 LIIRTLQLFEE----VHHTFMELLPQVILHLWICNYFKTINAFFHHVIIHHLTSLI 416
           L+ +T++  EE    V+  +  L   +  H+++ N   T    F+H++++HLT ++
Sbjct: 45  LVPQTIETIEEQAERVYSQYRLLKADIDKHVYLRNLQDTNETLFYHLVVNHLTEMM 100

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954774|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0021_F12, 5'
         (585 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0S318|B0S318_FINM2 Putative uncharacterized protein OS=Fineg...    34   5.2  
tr|B8KB90|B8KB90_VIBPA Fimbrial assembly protein OS=Vibrio parah...    34   6.9  
tr|Q54W90|Q54W90_DICDI Putative uncharacterized protein OS=Dicty...    34   6.9  

>tr|B0S318|B0S318_FINM2 Putative uncharacterized protein
           OS=Finegoldia magna (strain ATCC 29328) GN=FMG_1340 PE=4
           SV=1
          Length = 263

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
 Frame = +2

Query: 359 LLHQGKK-EGQISRKEPLPMYKAREM-VDYHMMKKRIDGLKVITDPKMEYDLRK---QFH 523
           LLH+ K  E Q   K     YK  E   DY  +K++++ + +  +     DL+K   Q  
Sbjct: 36  LLHECKNIEDQYILKFGKLEYKVYEAECDYRRLKRKLELIIICRNHNKPIDLKKIDEQLE 95

Query: 524 EGMVDFFKKLQGAYDEIE 577
           + + +F+KKL    DEIE
Sbjct: 96  KELAEFYKKLNARLDEIE 113


>tr|B8KB90|B8KB90_VIBPA Fimbrial assembly protein OS=Vibrio
           parahaemolyticus 16 GN=pilQ PE=4 SV=1
          Length = 553

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = +2

Query: 341 DYETWNLLHQGKKEGQIS-RKEPLPMYKAREMV-DYHMMKKRIDGLKVITDPKMEYDLRK 514
           DY  +NL+     +G ++ R + +P  +  +++     + KRIDG  V+  PK E DLR+
Sbjct: 159 DYNDFNLVVSDSVQGNLTLRLDGVPWQQVLDIILQVKGLDKRIDGNVVLVAPKAELDLRE 218

Query: 515 Q 517
           Q
Sbjct: 219 Q 219


>tr|Q54W90|Q54W90_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0206311 PE=4 SV=1
          Length = 894

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 21/80 (26%), Positives = 36/80 (45%)
 Frame = +2

Query: 332 YEFDYETWNLLHQGKKEGQISRKEPLPMYKAREMVDYHMMKKRIDGLKVITDPKMEYDLR 511
           Y+F Y+ W  +   +     S+KE L +Y+  E V+  M +   D +K I +      ++
Sbjct: 372 YQFSYQVWETIKSNRDLDLPSQKEMLALYRCDEFVEQSMTQFTRD-IKPIKEHIERGRIQ 430

Query: 512 KQFHEGMVDFFKKLQGAYDE 571
           +QF E       +    YDE
Sbjct: 431 EQFGEKSKRILDQSLSVYDE 450