DK954773 |
Clone id |
TST39A01NGRL0021_F11 |
Library |
TST39 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_F11. 5' end sequence. |
Accession |
DK954773 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CAGGGGGTATCTAGTACTGCAGAGTTTAGAAAGAACAGGCTTAAGGTAGCAGAGGTGGAT TCAGGGTTTATTGGAAGAACCCACTTTAGTGAGTTTTCTGAAGTACCAAGTTGCAAGGAT GATGCTGCACTAACTGACTCTTCGGTTACTCTTTTACAAAAAAATGATGTACCACACTTA AATGGAAGTTTTGCCCTGCACCAAGCCTATGAAACTACACCAAATGTGCAGAAATCTTTT AGAGAAGTTTCAGATGACAAGGCTTTGTTTTTGTTCGAGCAATGCAGGGATGATAGCATT GGCAGTAGATCAAAGAAGCGATTGGAATTTCAGGAGCCAGAAACTCACTGCAAACAAAAA GTCGTCGGGGAGATGAAGGTGATAGATGATTCCTTCTTTGCATGTTCCCCTGCTGTCACC GGAGAACATAGAATGAAGCCAGCCATCGAGTCTGAACTACAAGGCAACCAAATTTATGAT AAGATGTCTAAGCAAGCGCTCCGAGTCAACTCAGTAGTCTCCTCGAGACATGAGCCAGAT GACTTGTTAATGTTGCACAGGCAACGGAACCATGAACCTTCTAGAAATACAAGTGATGTA CTGAACTTCGACGCTTGAGCTTCGTGATTCTGGAAAACATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5VT06 |
Definition |
sp|Q5VT06|CE350_HUMAN Centrosome-associated protein 350 OS=Homo sapiens |
Align length |
144 |
Score (bit) |
33.1 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A0QP95 |
Definition |
tr|A0QP95|A0QP95_MYCS2 AMP-dependent synthetase and ligase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) |
Align length |
28 |
Score (bit) |
35.8 |
E-value |
2.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954773|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_F11, 5' (641 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A0QP95|A0QP95_MYCS2 AMP-dependent synthetase and ligase OS=My... 36 2.3 tr|Q4DPI3|Q4DPI3_TRYCR Protein kinase, putative OS=Trypanosoma c... 36 2.3 tr|Q4D1J3|Q4D1J3_TRYCR Protein kinase, putative OS=Trypanosoma c... 36 2.3 tr|B0EI88|B0EI88_ENTDI Putative uncharacterized protein OS=Entam... 36 2.3 tr|Q21HX2|Q21HX2_SACD2 Acriflavin resistance protein OS=Saccharo... 35 3.0 tr|A9RVM0|A9RVM0_PHYPA Predicted protein OS=Physcomitrella paten... 35 3.0 tr|A4T3V3|A4T3V3_MYCGI AMP-dependent synthetase and ligase OS=My... 35 5.1 tr|Q0E077|Q0E077_ORYSJ Os02g0572700 protein OS=Oryza sativa subs... 35 5.1 tr|Q7RQL2|Q7RQL2_PLAYO Putative uncharacterized protein PY01084 ... 35 5.1 tr|Q9WJD2|Q9WJD2_9VIRU Nonstructural polyprotein OS=Venezuelan e... 34 8.7 tr|B7PY36|B7PY36_IXOSC Homeobox protein, putative OS=Ixodes scap... 34 8.7
>tr|A0QP95|A0QP95_MYCS2 AMP-dependent synthetase and ligase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_0318 PE=4 SV=1 Length = 495
Score = 35.8 bits (81), Expect = 2.3 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +1
Query: 361 VVGEMKVIDDSFFACSPAVTGEHRMKPA 444 V GEMKV+DD C P VTGE M+P+ Sbjct: 316 VAGEMKVLDDDGNECPPGVTGEVYMRPS 343
>tr|Q4DPI3|Q4DPI3_TRYCR Protein kinase, putative OS=Trypanosoma cruzi GN=Tc00.1047053506513.160 PE=4 SV=1 Length = 716
Score = 35.8 bits (81), Expect = 2.3 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 3/115 (2%) Frame = +1
Query: 10 SSTAEFRKNRLKVAEVDSG-FIGRTHFSEFSEVPSCKDDAALTDSSVTLLQKND-VPHLN 183 S+ EF K V G +GR F++ EV + AL ++LQK + L+ Sbjct: 33 STLKEFDKQGRVVGRFRCGRLLGRGGFAKCYEVERDGESYALKVIDRSILQKTKTLQKLH 92
Query: 184 GSFALHQAYETTPNVQKSFREVSDDKALF-LFEQCRDDSIGSRSKKRLEFQEPET 345 ++H+ + N+ R DD ++ L E+C + ++ SK+R F PET Sbjct: 93 SEISIHRRMKHK-NIVNFIRTFQDDWNVYMLLEKCSNQTLMEISKRRTRFTVPET 146
>tr|Q4D1J3|Q4D1J3_TRYCR Protein kinase, putative OS=Trypanosoma cruzi GN=Tc00.1047053508917.10 PE=4 SV=1 Length = 716
Score = 35.8 bits (81), Expect = 2.3 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 3/115 (2%) Frame = +1
Query: 10 SSTAEFRKNRLKVAEVDSG-FIGRTHFSEFSEVPSCKDDAALTDSSVTLLQKND-VPHLN 183 S+ EF K V G +GR F++ EV + AL ++LQK + L+ Sbjct: 33 STLKEFDKQGRVVGRFRCGRLLGRGGFAKCYEVERDGESYALKVIDRSILQKTKTLQKLH 92
Query: 184 GSFALHQAYETTPNVQKSFREVSDDKALF-LFEQCRDDSIGSRSKKRLEFQEPET 345 ++H+ + N+ R DD ++ L E+C + ++ SK+R F PET Sbjct: 93 SEISIHRRMKHK-NIVNFIRTFQDDWNVYMLLEKCSNQTLMEISKRRTRFTVPET 146
>tr|B0EI88|B0EI88_ENTDI Putative uncharacterized protein OS=Entamoeba dispar SAW760 GN=EDI_295090 PE=4 SV=1 Length = 417
Score = 35.8 bits (81), Expect = 2.3 Identities = 25/93 (26%), Positives = 42/93 (45%) Frame = +1
Query: 118 DDAALTDSSVTLLQKNDVPHLNGSFALHQAYETTPNVQKSFREVSDDKALFLFEQCRDDS 297 +D LT+ L KN N L +T N Q +E +D+ L L + C++ Sbjct: 145 NDIKLTEEKQISLNKN-----NNVVILKPKINSTNNEQPQQQENQEDQILQL-QTCKETD 198
Query: 298 IGSRSKKRLEFQEPETHCKQKVVGEMKVIDDSF 396 + ++ Q +T CK+K+V E + +SF Sbjct: 199 QSKEKIEEMKDQSLQTDCKEKLVNEKDINKESF 231
>tr|Q21HX2|Q21HX2_SACD2 Acriflavin resistance protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=Sde_2447 PE=4 SV=1 Length = 1053
Score = 35.4 bits (80), Expect = 3.0 Identities = 27/79 (34%), Positives = 39/79 (49%) Frame = +1
Query: 151 LLQKNDVPHLNGSFALHQAYETTPNVQKSFREVSDDKALFLFEQCRDDSIGSRSKKRLEF 330 LL+ +P++ FAL +++ P+V S RE DKA EQ R S + K L++ Sbjct: 562 LLKMAIIPNI-ADFALQASFQFHPSVAPSIRETIGDKAT---EQLRAVSEEVKQKYNLDY 617
Query: 331 QEPETHCKQKVVGEMKVID 387 Q P H Q G V+D Sbjct: 618 Q-PVKHISQHYSGSELVVD 635
>tr|A9RVM0|A9RVM0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71220 PE=4 SV=1 Length = 320
Score = 35.4 bits (80), Expect = 3.0 Identities = 20/60 (33%), Positives = 30/60 (50%) Frame = -1
Query: 185 PFKCGTSFFCKRVTEESVSAASSLQLGTSENSLKWVLPINPESTSATLSLFFLNSAVLDT 6 P CG+ F V ++V S GTS N +K+VL +NP +L+ F + +L T Sbjct: 158 PTNCGSQFPLSSVRHDAVQQQPS---GTSINEIKFVLDLNPSCPENSLAFSFSSCKILPT 214
>tr|A4T3V3|A4T3V3_MYCGI AMP-dependent synthetase and ligase OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_0419 PE=4 SV=1 Length = 492
Score = 34.7 bits (78), Expect = 5.1 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = +1
Query: 361 VVGEMKVIDDSFFACSPAVTGEHRMKPA 444 V GEMKV+DD C P V GE M+PA Sbjct: 323 VAGEMKVLDDDGNECPPGVPGEIYMRPA 350
>tr|Q0E077|Q0E077_ORYSJ Os02g0572700 protein OS=Oryza sativa subsp. japonica GN=Os02g0572700 PE=4 SV=1 Length = 294
Score = 34.7 bits (78), Expect = 5.1 Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 7/131 (5%) Frame = -1
Query: 461 CSSDSMAGFILCSPVTAGEHAKKESSITFISPTTFCLQ*VSGS*NSNRFFDLLPMLSSLH 282 C+SDS A L S VTA E A SS F+ ++ C + R L P++SS Sbjct: 127 CASDSHAFTCLASMVTA-ESAAVRSSAAFLLFSSAC--------TAARSLALSPLISSST 177
Query: 281 CSNKNK-------ALSSETSLKDFCTFGVVS*AWCRAKLPFKCGTSFFCKRVTEESVSAA 123 N A S + C V + + ++ F C SF C +++ S+ + Sbjct: 178 PPNMRSMTLHWAAAAGSAAGARPCCCRSVATSSLASSRAIFACSISFVC-CISDSSIFIS 236
Query: 122 SSLQLGTSENS 90 + + TS +S Sbjct: 237 VAFAVATSRSS 247
>tr|Q7RQL2|Q7RQL2_PLAYO Putative uncharacterized protein PY01084 OS=Plasmodium yoelii yoelii GN=PY01084 PE=4 SV=1 Length = 1659
Score = 34.7 bits (78), Expect = 5.1 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 12/109 (11%) Frame = +1
Query: 70 IGRTHFSEFSEVPSCKDDAALTDSSV------TLLQKNDVPHLNGSFALHQAYETTPNVQ 231 I +T +E SE + K++A+ ++S T +KND+ ++ HQ ET N Sbjct: 1181 INKTGKNEASENETSKNEASENEASKNEHNWKTRNEKNDIENIGSKNIFHQTIETQSNTS 1240
Query: 232 KSFREVSDD------KALFLFEQCRDDSIGSRSKKRLEFQEPETHCKQK 360 ++ +D ++ +C +DS ++ L+F++ E + + K Sbjct: 1241 NNYSNNENDTFYDSSQSGGYNSECNEDSNNCKNMHVLKFEDEEDNEENK 1289
>tr|Q9WJD2|Q9WJD2_9VIRU Nonstructural polyprotein OS=Venezuelan equine encephalitis virus PE=4 SV=1 Length = 2506
Score = 33.9 bits (76), Expect = 8.7 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2
Query: 400 QRRNHLSPSSPRRLFVCSEFLAPEIPIASLIYCQCYHPCIARTK 269 +R L S P ++ VCS F P+ IA + QC HP + K Sbjct: 1604 ERVQRLKASRPEQITVCSSFALPKYRIAGVQKIQCSHPILFSPK 1647
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