DK954766 |
Clone id |
TST39A01NGRL0021_F02 |
Library |
TST39 |
Length |
668 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_F02. 5' end sequence. |
Accession |
DK954766 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2909Contig1 |
Sequence |
GCGTTTTCTTTGTAGCCACAGCCATGGCGGCCCCAAAATTCAATCTCAACAATCCTGCTG TGAAGAGGATTCTGCAGGAGATGAAGGAGATGCAAAGCAATCCTAGCGAGGACTACATGA GTCTTCCTCTTGAGGATAATATATTTGAATGGCAATTTGCAATACGCGGCCCCCTAGACT CTGAATTTGAAGGAGGGATATATCATGGCCGTATCCAACTTCCTCCTGAGTATCCATTCA AGCCTCCTTCATTTATGCTTTTAACGCCAAATGGGAGGTTTGAAACACAGACCAAAATCT GTTTGAGCATCTCCCAATTTCACCCTGAGCATTGGCAACCATCCTGGAGTGTCAGAACCG CTTTAGTGGCGTTGATTGCATTCATGCCAACAAAAGGAAATGGTGCCATAGGTTCTTTAG AGTTTACAAAAGAGGAGAGGAAGGCCCTTGCATTGAAATCTGTTGAATCTCCTCCCAAAT ATGGAACTGCTGAACGGCAGAAAGTGATTGATGAGATCCATGAAGAAATGTTGAAACGAG TGCAAAAGCTTCCAGCAGAAGCTCCTAAAGAGGCTGAGAGTGAAGCTGCAAGCATGGGAA CGGACAGTGACGGCTCCNAAAATATTGAAGAGACTGTAGCACATGTGGCAGTTTTGCCTG AGGTTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LSP7 |
Definition |
sp|Q9LSP7|UBC32_ARATH Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana |
Align length |
172 |
Score (bit) |
290.0 |
E-value |
6.0e-78 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LP14 |
Definition |
tr|B8LP14|B8LP14_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
170 |
Score (bit) |
298.0 |
E-value |
2.0e-79 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954766|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_F02, 5' (668 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LP14|B8LP14_PICSI Putative uncharacterized protein OS=Picea... 298 2e-79 tr|A7Q8P3|A7Q8P3_VITVI Chromosome chr5 scaffold_64, whole genome... 295 1e-78 tr|A5BBF4|A5BBF4_VITVI Putative uncharacterized protein OS=Vitis... 295 1e-78 tr|Q10MI2|Q10MI2_ORYSJ Os03g0308000 protein OS=Oryza sativa subs... 291 3e-77 tr|A9U0W3|A9U0W3_PHYPA Predicted protein OS=Physcomitrella paten... 287 5e-76 tr|B8AMH5|B8AMH5_ORYSI Putative uncharacterized protein OS=Oryza... 286 6e-76 tr|B6TT84|B6TT84_MAIZE Ubiquitinating enzyme OS=Zea mays PE=2 SV=1 278 2e-73 tr|A8JBR3|A8JBR3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 256 1e-66 tr|A3AH80|A3AH80_ORYSJ Putative uncharacterized protein OS=Oryza... 249 1e-64 tr|Q54U33|Q54U33_DICDI Putative uncharacterized protein OS=Dicty... 215 2e-54 tr|Q6P7Y0|Q6P7Y0_DANRE Novel protein (Zgc:63554) OS=Danio rerio ... 214 3e-54 tr|B6MS25|B6MS25_BRAFL Putative uncharacterized protein OS=Branc... 214 5e-54 tr|B5X1W4|B5X1W4_SALSA Ubiquitin-conjugating enzyme E2 J1 OS=Sal... 212 1e-53 tr|B6NYE5|B6NYE5_BRAFL Putative uncharacterized protein OS=Branc... 211 3e-53 tr|Q9I9B8|Q9I9B8_CHICK Non-Canonical UBiquitin Conjugating Enzym... 207 5e-52 tr|A3KMT1|A3KMT1_XENLA LOC100049091 protein OS=Xenopus laevis GN... 207 6e-52 tr|Q3UDP8|Q3UDP8_MOUSE Putative uncharacterized protein OS=Mus m... 207 6e-52 tr|Q3TV38|Q3TV38_MOUSE Putative uncharacterized protein OS=Mus m... 207 6e-52 tr|A3KG50|A3KG50_MOUSE Ubiquitin-conjugating enzyme E2 J1 OS=Mus... 207 6e-52 tr|Q06AB1|Q06AB1_PIG UB2J1 OS=Sus scrofa PE=2 SV=1 207 6e-52 tr|Q53F25|Q53F25_HUMAN Ubiquitin-conjugating enzyme E2, J1 varia... 207 6e-52 tr|B7QB87|B7QB87_IXOSC Ubiquitin protein ligase, putative (Fragm... 205 2e-51 tr|Q5BW62|Q5BW62_SCHJA SJCHGC05477 protein (Fragment) OS=Schisto... 202 2e-50 tr|B8AMH2|B8AMH2_ORYSI Putative uncharacterized protein OS=Oryza... 195 2e-48 tr|B3RXR2|B3RXR2_TRIAD Putative uncharacterized protein (Fragmen... 194 5e-48 tr|Q5U4Q5|Q5U4Q5_XENTR Ubiquitin-conjugating enzyme E2, J1 (UBC6... 190 6e-47 tr|B4DUF8|B4DUF8_HUMAN cDNA FLJ52165, highly similar to Ubiquiti... 190 6e-47 tr|A3KG52|A3KG52_MOUSE Ubiquitin-conjugating enzyme E2 J1 (Fragm... 189 1e-46 tr|B8C5I3|B8C5I3_THAPS Predicted protein (Fragment) OS=Thalassio... 185 3e-45 tr|A7SBT3|A7SBT3_NEMVE Predicted protein OS=Nematostella vectens... 182 2e-44
>tr|B8LP14|B8LP14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 307
Score = 298 bits (763), Expect = 2e-79 Identities = 138/170 (81%), Positives = 155/170 (91%) Frame = +3
Query: 30 APKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYHG 209 A KFN+ NPAVKRILQE+KEMQ+NPS+DYMSLPLEDNIFEWQFAIRGP D+EFEGGIYHG Sbjct: 2 ADKFNMKNPAVKRILQEVKEMQNNPSDDYMSLPLEDNIFEWQFAIRGPRDTEFEGGIYHG 61
Query: 210 RIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFMP 389 RIQLPP+YP KPPSFMLLTPNGRFETQTKICLSIS +HPEHWQPSWSVR ALVALIAFMP Sbjct: 62 RIQLPPDYPLKPPSFMLLTPNGRFETQTKICLSISNYHPEHWQPSWSVRAALVALIAFMP 121
Query: 390 TKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 TK GA+GSL+++KEER ALA+KS PPKYG A+RQ++IDE+HE ML + Sbjct: 122 TKPEGAVGSLDYSKEERTALAIKSRTHPPKYGNADRQRLIDEVHEYMLNK 171
>tr|A7Q8P3|A7Q8P3_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033129001 PE=3 SV=1 Length = 297
Score = 295 bits (756), Expect = 1e-78 Identities = 140/172 (81%), Positives = 155/172 (90%) Frame = +3
Query: 24 MAAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIY 203 MA K+NL NP VKRILQE+KEMQSNPS+D+MSLPLE+NIFEWQFAIRGP D+EFEGGIY Sbjct: 1 MAEDKYNLKNPGVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPSDTEFEGGIY 60
Query: 204 HGRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAF 383 HGRIQLP EYPF+PPSFMLLTPNGRFETQTKICLSIS HPEHWQPSWSVRTALVALIAF Sbjct: 61 HGRIQLPAEYPFQPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 384 MPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 MPT NGA+GSL++ KEER ALA+KS E+ PK+GT ERQK+IDEIHE ML + Sbjct: 121 MPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSK 172
>tr|A5BBF4|A5BBF4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020701 PE=3 SV=1 Length = 297
Score = 295 bits (756), Expect = 1e-78 Identities = 140/172 (81%), Positives = 155/172 (90%) Frame = +3
Query: 24 MAAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIY 203 MA K+NL NP VKRILQE+KEMQSNPS+D+MSLPLE+NIFEWQFAIRGP D+EFEGGIY Sbjct: 1 MAEDKYNLKNPGVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPSDTEFEGGIY 60
Query: 204 HGRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAF 383 HGRIQLP EYPF+PPSFMLLTPNGRFETQTKICLSIS HPEHWQPSWSVRTALVALIAF Sbjct: 61 HGRIQLPAEYPFQPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 384 MPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 MPT NGA+GSL++ KEER ALA+KS E+ PK+GT ERQK+IDEIHE ML + Sbjct: 121 MPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSK 172
>tr|Q10MI2|Q10MI2_ORYSJ Os03g0308000 protein OS=Oryza sativa subsp. japonica GN=Os03g0308000 PE=2 SV=1 Length = 313
Score = 291 bits (744), Expect = 3e-77 Identities = 136/171 (79%), Positives = 155/171 (90%) Frame = +3
Query: 27 AAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYH 206 A K+N NPAVKRILQE+KEMQSNPS D+M++PLE++IFEWQFAI GP DSEFEGGIYH Sbjct: 3 ATAKYNRGNPAVKRILQEVKEMQSNPSPDFMAMPLEEDIFEWQFAILGPRDSEFEGGIYH 62
Query: 207 GRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFM 386 GRIQLP +YPFKPPSFMLLTP+GRFE Q KICLSIS +HPEHWQPSWSVRTALVALIAFM Sbjct: 63 GRIQLPSDYPFKPPSFMLLTPSGRFEIQKKICLSISNYHPEHWQPSWSVRTALVALIAFM 122
Query: 387 PTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 PT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R Sbjct: 123 PTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLSR 173
>tr|A9U0W3|A9U0W3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_153985 PE=3 SV=1 Length = 171
Score = 287 bits (734), Expect = 5e-76 Identities = 134/166 (80%), Positives = 151/166 (90%) Frame = +3
Query: 24 MAAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIY 203 MA ++N+ NPAVKRILQE+KEMQ+NPS DYMSLPLEDNIFEW FAIRGP DSEFEGGIY Sbjct: 1 MAEERYNMKNPAVKRILQEVKEMQNNPSADYMSLPLEDNIFEWHFAIRGPSDSEFEGGIY 60
Query: 204 HGRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAF 383 HGRIQLPPEYPFKPP+FMLLTPNGRFETQTKICLSISQ HPEHWQPSW+VRTALVALIAF Sbjct: 61 HGRIQLPPEYPFKPPAFMLLTPNGRFETQTKICLSISQHHPEHWQPSWTVRTALVALIAF 120
Query: 384 MPTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIH 521 MPTK +GA+GSL++TKEER+ LA+ S S PK+G AERQ +I+E+H Sbjct: 121 MPTKPDGALGSLDYTKEERRKLAINSRLSAPKFGNAERQALINEVH 166
>tr|B8AMH5|B8AMH5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11252 PE=4 SV=1 Length = 312
Score = 286 bits (733), Expect = 6e-76 Identities = 137/171 (80%), Positives = 154/171 (90%) Frame = +3
Query: 27 AAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYH 206 A K+N NPAVKRILQE+KEMQSNPS D+M++PLED IFEWQFAI GP DSEFEGGIYH Sbjct: 3 ATAKYNRGNPAVKRILQEVKEMQSNPSPDFMAMPLED-IFEWQFAILGPRDSEFEGGIYH 61
Query: 207 GRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFM 386 GRIQLP +YPFKPPSFMLLTP+GRFE Q KICLSIS +HPEHWQPSWSVRTALVALIAFM Sbjct: 62 GRIQLPSDYPFKPPSFMLLTPSGRFEIQKKICLSISNYHPEHWQPSWSVRTALVALIAFM 121
Query: 387 PTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 PT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R Sbjct: 122 PTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLGR 172
>tr|B6TT84|B6TT84_MAIZE Ubiquitinating enzyme OS=Zea mays PE=2 SV=1 Length = 309
Score = 278 bits (711), Expect = 2e-73 Identities = 130/171 (76%), Positives = 152/171 (88%) Frame = +3
Query: 27 AAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYH 206 A ++N +NPAVKRILQE+KEMQSNPS D+MSLPLE++IFEWQFAI GP DSEFEGGIYH Sbjct: 3 ATIQYNRSNPAVKRILQEVKEMQSNPSPDFMSLPLEEDIFEWQFAILGPRDSEFEGGIYH 62
Query: 207 GRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFM 386 GRIQLP +YPFKPPSFMLLTP+GRFE Q KICLSIS +HPEHWQPSWSVRTALVALIAFM Sbjct: 63 GRIQLPSDYPFKPPSFMLLTPSGRFEIQKKICLSISNYHPEHWQPSWSVRTALVALIAFM 122
Query: 387 PTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 PT GA+GSL++ E+R+ALA+KS E PPK+G+ +RQK+IDEIHE+ML + Sbjct: 123 PTNPGGALGSLDYKPEDRRALAIKSREVPPKFGSPQRQKLIDEIHEQMLSK 173
>tr|A8JBR3|A8JBR3_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_185318 PE=3 SV=1 Length = 178
Score = 256 bits (653), Expect = 1e-66 Identities = 117/168 (69%), Positives = 143/168 (85%) Frame = +3
Query: 30 APKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYHG 209 APKFNL NPAVKRI+QE+KE++ + S D+++ LE +IFEW F IRGP D+EFEGGIYHG Sbjct: 4 APKFNLRNPAVKRIMQEIKEIKQDTSGDFLAEALESDIFEWHFVIRGPRDTEFEGGIYHG 63
Query: 210 RIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFMP 389 RI LP EYPFKPPSFM+LTPNGRFET KICLSIS HPEHWQPSWSVRTAL+ALIAFMP Sbjct: 64 RILLPAEYPFKPPSFMMLTPNGRFETNMKICLSISSHHPEHWQPSWSVRTALMALIAFMP 123
Query: 390 TKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEML 533 + GNGA+G+++FTK+ER+ LA +S P++G+AERQ+VID++H ML Sbjct: 124 SPGNGALGAIDFTKDERRILAARSRTELPRFGSAERQRVIDDMHARML 171
>tr|A3AH80|A3AH80_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010152 PE=3 SV=1 Length = 295
Score = 249 bits (635), Expect = 1e-64 Identities = 122/171 (71%), Positives = 137/171 (80%) Frame = +3
Query: 27 AAPKFNLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYH 206 A K+N PAVKRILQE ++IFEWQFAI GP DSEFEGGIYH Sbjct: 3 ATAKYNRGKPAVKRILQE------------------EDIFEWQFAILGPRDSEFEGGIYH 44
Query: 207 GRIQLPPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFM 386 GRIQLP +YPFKPPSFMLLTP+GRFE Q KICLSIS +HPEHWQPSWSVRTALVALIAFM Sbjct: 45 GRIQLPSDYPFKPPSFMLLTPSGRFEIQKKICLSISNYHPEHWQPSWSVRTALVALIAFM 104
Query: 387 PTKGNGAIGSLEFTKEERKALALKSVESPPKYGTAERQKVIDEIHEEMLKR 539 PT G GA+GSL+F KE+R+ALA+KS E+PPK+G+AERQKVIDEIHE+ML R Sbjct: 105 PTPGGGALGSLDFKKEDRRALAIKSRETPPKFGSAERQKVIDEIHEQMLSR 155
>tr|Q54U33|Q54U33_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0218298 PE=3 SV=1 Length = 401
Score = 215 bits (548), Expect = 2e-54 Identities = 96/142 (67%), Positives = 119/142 (83%) Frame = +3
Query: 42 NLNNPAVKRILQEMKEMQSNPSEDYMSLPLEDNIFEWQFAIRGPLDSEFEGGIYHGRIQL 221 N NNPAVKRIL+E++E++++ + DY + PLEDNIFEW F IRGP DS+F GGIYHGRI L Sbjct: 5 NPNNPAVKRILREIQELRNDTNPDYKAFPLEDNIFEWHFTIRGPQDSDFNGGIYHGRIIL 64
Query: 222 PPEYPFKPPSFMLLTPNGRFETQTKICLSISQFHPEHWQPSWSVRTALVALIAFMPTKGN 401 P EYPFKPP+ +LLTPNGRFET KICL++S HPEHWQPSWS+RT LVALI FMPT+G Sbjct: 65 PSEYPFKPPNIVLLTPNGRFETNVKICLTVSAHHPEHWQPSWSIRTVLVALIGFMPTEGK 124
Query: 402 GAIGSLEFTKEERKALALKSVE 467 GAIG+++ ++RK LALKS++ Sbjct: 125 GAIGAIDLPTKDRKELALKSLD 146
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