DK954747 |
Clone id |
TST39A01NGRL0021_E07 |
Library |
TST39 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0021_E07. 5' end sequence. |
Accession |
DK954747 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CATGAAAACACCTTGACGGGACATTATACTAGAGAGACTCGCGAGAGGTGAAGCCACAGA AGGGAGAATGTTAACTGTGAATCCCAGCAGCACCCTTCGAATTCATTCCAGGCCAGGGAA TAATGACTATTGCTCAGTTGGAAGTTTCACAAGGCTTGTTCAAGTATTCCCATTGATTCT CAAAAGGAAAGAGGTGCAATTACGGATGCTGAAAGGCGTGCACAGCATGGCACCCCTCCC TGGCGTAACAGGATTCGGGTCACAACGGGAAGGAGGCAAAGCAAAGCATAAAGTTTTGAC TTTGGATCCAACAAAAGTGGAACAAGTGGTAACGTTTGACTTGTTTGCGAGGAGATTCTC AGAGAATGAGCCTTCTGCAAAGTGGGAACCTATCGGAGAGATTTTACTGGAGAAAGAGAC GGACCTGGAGATGGCCTTGAAGGAAAGGAGGAAGAAACTCCTTGCGGCAGCCCAACATCA GTATCCATCGCTTTTGCTACTAAATGCTGGAGAGGAAGTGCAGTATGGTTATCGTAAGTC GGGTGAAGAATCAAAAGATGCAGAAATTATTGCTGTGGATGTGAAAGGAAAGGAGATTGA AACGTCCATCGAAGCAATTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8R9V2 |
Definition |
sp|Q8R9V2|Y1483_THETN UPF0348 protein TTE1483 OS=Thermoanaerobacter tengcongensis |
Align length |
116 |
Score (bit) |
33.9 |
E-value |
0.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4RY89 |
Definition |
tr|A4RY89|A4RY89_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) |
Align length |
99 |
Score (bit) |
43.5 |
E-value |
0.01 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954747|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0021_E07, 5' (621 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4RY89|A4RY89_OSTLU Predicted protein (Fragment) OS=Ostreococ... 44 0.010 tr|Q00ZI0|Q00ZI0_OSTTA Chromosome 10 contig 1, DNA sequence OS=O... 42 0.038 tr|Q9ZFX3|Q9ZFX3_PSEAC Outer membrane secretion protein U OS=Pse... 37 0.72 tr|A4S466|A4S466_OSTLU Predicted protein (Fragment) OS=Ostreococ... 37 0.94 tr|Q2IER8|Q2IER8_ANADE Tetratricopeptide repeat protein OS=Anaer... 37 1.2 tr|Q3KDE2|Q3KDE2_PSEPF Twin-arginine translocation pathway signa... 36 1.6 tr|Q9FVZ5|Q9FVZ5_ORYSJ Putative uncharacterized protein OSJNBb00... 35 2.7 tr|Q7XD07|Q7XD07_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.7 tr|B0X9L8|B0X9L8_CULQU Oseg5 OS=Culex quinquefasciatus GN=CpipJ_... 35 2.7 tr|B0W0C2|B0W0C2_CULQU Intraflagellar transport 80 OS=Culex quin... 35 2.7 tr|Q5NAA4|Q5NAA4_ORYSJ Helicase-like protein OS=Oryza sativa sub... 35 3.6 tr|Q2R1E0|Q2R1E0_ORYSJ Jacalin-like lectin domain containing pro... 35 3.6 tr|Q0JP44|Q0JP44_ORYSJ Os01g0244200 protein OS=Oryza sativa subs... 35 3.6 tr|Q30P62|Q30P62_SULDN DEAD/DEAH box helicase-like protein OS=Su... 35 4.7 tr|B7GEF9|B7GEF9_PHATR Predicted protein OS=Phaeodactylum tricor... 34 6.1 tr|Q6FIS4|Q6FIS4_CANGA Similar to uniprot|P39730 Saccharomyces c... 34 6.1 tr|Q803V1|Q803V1_DANRE Brd8 protein (Fragment) OS=Danio rerio GN... 34 7.9 tr|Q6QQG0|Q6QQG0_9MONO Nucleoprotein OS=Human metapneumovirus PE... 34 7.9 tr|Q0PHM6|Q0PHM6_9MONO Nucleocapsid (Fragment) OS=Human metapneu... 34 7.9 tr|Q06DQ7|Q06DQ7_9MONO Nucleocapsid protein (Fragment) OS=Human ... 34 7.9 tr|Q06DQ6|Q06DQ6_9MONO Nucleocapsid protein (Fragment) OS=Human ... 34 7.9 tr|Q06DQ5|Q06DQ5_9MONO Nucleocapsid protein (Fragment) OS=Human ... 34 7.9 tr|Q06DQ4|Q06DQ4_9MONO Nucleocapsid protein (Fragment) OS=Human ... 34 7.9 tr|B6K3T5|B6K3T5_SCHJP 5'-3' exoribonuclease OS=Schizosaccharomy... 34 7.9
>tr|A4RY89|A4RY89_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_92826 PE=4 SV=1 Length = 209
Score = 43.5 bits (101), Expect = 0.010 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%) Frame = +2
Query: 296 LTLDPTKVEQVVTFDLFARR-FSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAAA 472 ++ D + V F LFARR S +W P+G+++ E+ T++E +ER + L A Sbjct: 56 VSCDADAMTDTVEFFLFARRKTSAGGDDERWLPLGDVVFERSTNVEDVARERYRILCEYA 115
Query: 473 QHQYPSLLL----LNAGEEVQYGYRKSGEESKDAEIIAV 577 + +Y L + L G VQ G K + EI+ V Sbjct: 116 RKRYLRLNVGKGGLEIGARVQKGVAKHPDARDATEIVYV 154
>tr|Q00ZI0|Q00ZI0_OSTTA Chromosome 10 contig 1, DNA sequence OS=Ostreococcus tauri GN=Ot10g03440 PE=4 SV=1 Length = 169
Score = 41.6 bits (96), Expect = 0.038 Identities = 25/89 (28%), Positives = 43/89 (48%) Frame = +2
Query: 329 VTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAAAQHQYPSLLLLNA 508 V F++F R N+ W P+G + ++ ++ + + L AA YP+L A Sbjct: 45 VVFEVFVRAKGPNQ----WFPVGPLAVKSPRAVKREIWAAEQPLRTAALKMYPALAKPPA 100
Query: 509 GEEVQYGYRKSGEESKDAEIIAVDVKGKE 595 ++YGYR+ E SK E + KG++ Sbjct: 101 FGNLEYGYRERDESSKITEAEIREKKGQK 129
>tr|Q9ZFX3|Q9ZFX3_PSEAC Outer membrane secretion protein U OS=Pseudomonas alcaligenes GN=xcpU PE=4 SV=1 Length = 174
Score = 37.4 bits (85), Expect = 0.72 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%) Frame = +2
Query: 320 EQVVTFDLFARRFSENEP-SAKWEPIGEIL--LEKETDLEMALKERRKKLLAAAQHQ--- 481 E V FD + R EP +A+WEP+ E + L + +LE+ + E+ L AA Q Sbjct: 64 EYGVRFDARSYRVLRFEPRTARWEPLDERVHELPEWLELEIEVDEQSVGLPAARGEQDKA 123
Query: 482 ---YPSLLLLNAGEEVQYGYRKSGEESKDAEIIAVDVKG 589 P LLLL++GE + R S + A ++ + G Sbjct: 124 AAKAPQLLLLSSGELTPFALRLSAGRERGAPVLTLASDG 162
>tr|A4S466|A4S466_OSTLU Predicted protein (Fragment) OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_9032 PE=4 SV=1 Length = 95
Score = 37.0 bits (84), Expect = 0.94 Identities = 21/68 (30%), Positives = 33/68 (48%) Frame = +2
Query: 335 FDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAAAQHQYPSLLLLNAGE 514 F++F R N+ W P+G + E +++ + K L AA YP+L A Sbjct: 30 FEVFVRAAGPNQ----WFPVGPLASESPRNIKKEIWAAEKPLKEAAFKMYPALAKPPAFG 85
Query: 515 EVQYGYRK 538 V+YGYR+ Sbjct: 86 RVEYGYRE 93
>tr|Q2IER8|Q2IER8_ANADE Tetratricopeptide repeat protein OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_3311 PE=4 SV=1 Length = 4074
Score = 36.6 bits (83), Expect = 1.2 Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 1/126 (0%) Frame = +2
Query: 98 RIHSRPGNNDYCSVGSFTRLVQVFPLILKRKEVQLRMLKGVHSMAPLPGVTGFGSQREGG 277 R++ R G + + G+ TRL +V P RKE+ L + K + S REG Sbjct: 1804 RVYRRMGAHRELA-GTLTRLAEVAPAAAARKELLLEVAKIMAEQL---------SDREGA 1853
Query: 278 -KAKHKVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRK 454 A K+L++DP E L R E +WE + ++L D E+AL +R+ Sbjct: 1854 VDAYRKILSVDP---EDPQALRLLGRLLGAAE---RWEELVQVL-----DREVALADRQP 1902
Query: 455 KLLAAA 472 +A A Sbjct: 1903 NFVAEA 1908
>tr|Q3KDE2|Q3KDE2_PSEPF Twin-arginine translocation pathway signal OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pf01_2472 PE=4 SV=1 Length = 749
Score = 36.2 bits (82), Expect = 1.6 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 11/111 (9%) Frame = +2
Query: 185 RKEVQLRMLKGVHSMAPLPGVTGFGSQREGGKAKHKVLTL-----DPTKVEQV------V 331 R E Q++ +KGVHS+ LPG ++R AK V + +PT +V Sbjct: 261 RNEEQVKAMKGVHSVHRLPGAVAVVAER-WWHAKRAVEAIQVDWQEPTADSKVRPMPADF 319
Query: 332 TFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAAAQHQY 484 + D + +R +E++ AK + E E D+ LKE + ++ A +QY Sbjct: 320 SSDAWFKRLAEDKSPAKDD-------EHEGDVASILKETKTRIDATYHNQY 363
>tr|Q9FVZ5|Q9FVZ5_ORYSJ Putative uncharacterized protein OSJNBb0073N24.6 OS=Oryza sativa subsp. japonica GN=OSJNBb0073N24.6 PE=4 SV=1 Length = 436
Score = 35.4 bits (80), Expect = 2.7 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +2
Query: 266 REGGKAKHKVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKE 445 + G K K L + T+ E ++F R S +EP +L++ DL + + Sbjct: 129 QRGAKPKFAQLYIYDTENETANRINIFDRENSNDEPDPSIVTRLGAMLDQHNDLVKSFRY 188
Query: 446 RRKKLLAAAQHQYPSLLL-LNAGEEVQYGYRKSGE 547 R +L Q LL NA +EVQY SGE Sbjct: 189 ARDRLNEHGNEQIALRLLGCNAKDEVQYNLPTSGE 223
>tr|Q7XD07|Q7XD07_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g35890 PE=4 SV=2 Length = 1077
Score = 35.4 bits (80), Expect = 2.7 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Frame = +2
Query: 266 REGGKAKHKVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKE 445 + G K K L + T+ E ++F R S +EP +L++ DL + + Sbjct: 324 QRGAKPKFAQLYIYDTENETANRINIFDRENSNDEPDPSIVTRLGAMLDQHNDLVKSFRY 383
Query: 446 RRKKLLAAAQHQYPSLLL-LNAGEEVQYGYRKSGE 547 R +L Q LL NA +EVQY SGE Sbjct: 384 ARDRLNEHGNEQIALRLLGCNAKDEVQYNLPTSGE 418
>tr|B0X9L8|B0X9L8_CULQU Oseg5 OS=Culex quinquefasciatus GN=CpipJ_CPIJ015951 PE=4 SV=1 Length = 751
Score = 35.4 bits (80), Expect = 2.7 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +2
Query: 290 KVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAA 469 +++ L K+ + + F L R W EI + +TDLE+ +KERRK L A Sbjct: 687 EIILLHNRKIREAILFCLRMHR---------WSKALEIAQKHDTDLELVMKERRKYLQAL 737
Query: 470 AQHQY-PSLLLL 502 + ++ PS L L Sbjct: 738 GREEHDPSYLAL 749
>tr|B0W0C2|B0W0C2_CULQU Intraflagellar transport 80 OS=Culex quinquefasciatus GN=CpipJ_CPIJ000486 PE=4 SV=1 Length = 679
Score = 35.4 bits (80), Expect = 2.7 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +2
Query: 290 KVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAA 469 +++ L K+ + + F L R W EI + +TDLE+ +KERRK L A Sbjct: 615 EIILLHNRKIREAILFCLRMHR---------WSKALEIAQKHDTDLELVMKERRKYLQAL 665
Query: 470 AQHQY-PSLLLL 502 + ++ PS L L Sbjct: 666 GREEHDPSYLAL 677
Score = 35.0 bits (79), Expect = 3.6 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = +2
Query: 290 KVLTLDPTKVEQVVTFDLFARRFSENEPSAKWEPIGEILLEKETDLEMALKERRKKLLAA 469 +++ L K+ + + F L R W EI + +TDLE+ +KERRK L A Sbjct: 260 EIILLHNRKIREAILFCLRMHR---------WSKALEIAQKHDTDLELVMKERRKYLQAL 310
Query: 470 AQHQYPSLLLLN 505 + ++ L N Sbjct: 311 GREEHDPSYLAN 322
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