DK954606
Clone id TST39A01NGRL0020_O06
Library
Length 616
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_O06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
ATCAGCCAGACGCAGCTCTCCGTGATGCAATGCAAGCCCAGTATATAAACCCGGAATGGC
CAACAGCCTTCTACTTGCAGTCCGTTGCACTAAAAATGCTCAACATGGAAAAGGAAGCGA
CAGATATGATGGAGGAAGGGGCGATTCTAGAGGCCAGGAAGAGTGGAAGGAGCTAGCTTG
CCAAAGATTGTGCGGTAAGTTGGTGCCCACTGAGGTAGAGCTAATTGAAACTGACACGGA
GTGGATGCGTCTGGTTTTGGAGGTCCACAGGTTTTACATGGCTTGCTCTCCCCTGCATTG
AGAAACCATGGGGGCTCTGGCATGAAAGCAGAGATGTGTTACCTATATACCCTACTATTC
TTTGTGATGCGTTTTGCAGTAGAACACCTTGGTGTTTTTGAGTTTGGCCTAAGATCGGCT
TGCCATGGCTATCAGCACCTTTTGATGAGCTTTGTGAAAAGAAAATTTATCTCATTCCAT
TAAAGAAAAAGCCTTGTGGTGTGATGTCCATGTACTCGCCATTTTGTTGTTCACAGGTGA
CGATGATTTCGGTGTTATACCCCCGACGTTGTTCCGTTCCTATTGCATAACTTTTTTGGT
TTCTTTAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q944A7
Definition sp|Q944A7|Y4523_ARATH Putative serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana
Align length 48
Score (bit) 65.5
E-value 2.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954606|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_O06, 5'
(591 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q944A7|Y4523_ARATH Putative serine/threonine-protein kinase A... 65 2e-10
sp|Q9FHD7|Y5126_ARATH Putative serine/threonine-protein kinase A... 51 4e-06
sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Hom... 37 0.056
sp|Q6HPT4|DISA_BACHK DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|Q63HB6|DISA_BACCZ DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|Q81J64|DISA_BACCR DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|Q73FC3|DISA_BACC1 DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|Q81VV7|DISA_BACAN DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|A0R8F5|DISA_BACAH DNA integrity scanning protein disA OS=Baci... 30 6.9
sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing fac... 30 9.0
sp|P41775|COX3_MYTED Cytochrome c oxidase subunit 3 OS=Mytilus e... 30 9.0

>sp|Q944A7|Y4523_ARATH Putative serine/threonine-protein kinase
At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1
Length = 512

Score = 65.5 bits (158), Expect = 2e-10
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ + P+WPTAFY+QSVAL LNM +A DM+ E A LE ++
Sbjct: 458 LRDAMQAQCVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505


>sp|Q9FHD7|Y5126_ARATH Putative serine/threonine-protein kinase
At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1
Length = 487

Score = 51.2 bits (121), Expect = 4e-06
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARKS 149
L +AMQAQ I+P W A YLQ+VAL L E EA +++GA+LE++++
Sbjct: 437 LNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485


>sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo
sapiens GN=TTC28 PE=1 SV=4
Length = 2481

Score = 37.4 bits (85), Expect = 0.056
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEG 125
L DA++A+ +NP+WP A++ Q VAL+ L +A G
Sbjct: 112 LDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASG 152


>sp|Q6HPT4|DISA_BACHK DNA integrity scanning protein disA
OS=Bacillus thuringiensis subsp. konkukian GN=disA PE=3
SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|Q63HB6|DISA_BACCZ DNA integrity scanning protein disA
OS=Bacillus cereus (strain ZK / E33L) GN=disA PE=3 SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|Q81J64|DISA_BACCR DNA integrity scanning protein disA
OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=disA
PE=3 SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|Q73FC3|DISA_BACC1 DNA integrity scanning protein disA
OS=Bacillus cereus (strain ATCC 10987) GN=disA PE=3 SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|Q81VV7|DISA_BACAN DNA integrity scanning protein disA
OS=Bacillus anthracis GN=disA PE=3 SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|A0R8F5|DISA_BACAH DNA integrity scanning protein disA
OS=Bacillus thuringiensis (strain Al Hakam) GN=disA PE=3
SV=1
Length = 357

Score = 30.4 bits (67), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3

Query: 346 RIVGYIGNTSLLSCQSPHGFSMQGRASHVKPVDLQN 239
+++GY G TSL +P G+ + + S V P+ ++N
Sbjct: 272 KLLGYPGQTSLEESVTPRGYRITSKISRVPPLIIEN 307


>sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing
facilitator CRS1, chloroplastic OS=Zea mays GN=CRS1 PE=1
SV=1
Length = 715

Score = 30.0 bits (66), Expect = 9.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = -2

Query: 305 PEPPWFLNAG-ESKPCKTCGPPKPDASTPCQFQLALPQWAPTYRTIFGKLAPST--LPG 138
P PPW + +S+ PP P +TP +F++ P+ AP + P T +PG
Sbjct: 17 PPPPWLHGSSTQSRDSAPPVPPLPAEATPSKFRIDSPKPAPARKNTKTAAKPLTAGVPG 75


tr_hit_id B7FLE0
Definition tr|B7FLE0|B7FLE0_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 48
Score (bit) 67.4
E-value 6.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954606|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_O06, 5'
(591 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FLE0|B7FLE0_MEDTR Putative uncharacterized protein OS=Medic... 67 6e-10
tr|Q8S7N5|Q8S7N5_ORYSJ Os10g0571300 protein OS=Oryza sativa subs... 67 8e-10
tr|B8BIC9|B8BIC9_ORYSI Putative uncharacterized protein OS=Oryza... 67 8e-10
tr|A3C7I5|A3C7I5_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja... 67 8e-10
tr|B4G0F6|B4G0F6_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09
tr|B4FVV1|B4FVV1_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09
tr|A7P8K5|A7P8K5_VITVI Chromosome chr3 scaffold_8, whole genome ... 66 2e-09
tr|Q10S67|Q10S67_ORYSJ Os03g0132800 protein OS=Oryza sativa subs... 65 2e-09
tr|A9SUZ3|A9SUZ3_PHYPA Predicted protein (Fragment) OS=Physcomit... 65 2e-09
tr|A5C572|A5C572_VITVI Putative uncharacterized protein (Chromos... 65 2e-09
tr|A3ADU2|A3ADU2_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A2XC47|A2XC47_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|B8A2Q2|B8A2Q2_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
tr|B6TZ93|B6TZ93_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1 65 3e-09
tr|B6TJM3|B6TJM3_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
tr|B4FVA2|B4FVA2_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
tr|B4FM36|B4FM36_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
tr|B4FC41|B4FC41_MAIZE Putative uncharacterized protein OS=Zea m... 65 3e-09
tr|A9RJ53|A9RJ53_PHYPA Predicted protein (Fragment) OS=Physcomit... 64 5e-09
tr|Q9LS26|Q9LS26_ARATH Protein kinase-like protein (At5g46570) O... 64 6e-09
tr|Q84WC2|Q84WC2_ARATH Putative uncharacterized protein At5g4657... 64 6e-09
tr|B6T888|B6T888_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1 64 6e-09
tr|Q9FWF0|Q9FWF0_ORYSA Protein kinase-like protein OS=Oryza sati... 63 1e-08
tr|Q336V9|Q336V9_ORYSJ Protein kinase family protein, putative, ... 63 1e-08
tr|Q0IW06|Q0IW06_ORYSJ Os10g0542800 protein (Fragment) OS=Oryza ... 63 1e-08
tr|B8BI27|B8BI27_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-08
tr|Q9FIL1|Q9FIL1_ARATH Protein kinase-like protein (At5g59010) (... 63 1e-08
tr|A8MQ88|A8MQ88_ARATH Uncharacterized protein At5g59010.2 OS=Ar... 63 1e-08
tr|A7NVT3|A7NVT3_VITVI Chromosome chr18 scaffold_1, whole genome... 62 2e-08
tr|A5B2F1|A5B2F1_VITVI Putative uncharacterized protein OS=Vitis... 62 2e-08

>tr|B7FLE0|B7FLE0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 113

Score = 67.4 bits (163), Expect = 6e-10
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ + P+WPT+FY+QSVAL LNM K+A DM+ E A LE ++
Sbjct: 59 LRDAMQAQCVYPDWPTSFYMQSVALAKLNMHKDAADMLNEAAALEEKR 106


>tr|Q8S7N5|Q8S7N5_ORYSJ Os10g0571300 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0095C07.6 PE=4 SV=1
Length = 512

Score = 67.0 bits (162), Expect = 8e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ PEWPTAFYLQ++AL L ME +A DM+ +GA EA+K
Sbjct: 459 LRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDMLNDGATFEAKK 506


>tr|B8BIC9|B8BIC9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34730 PE=4 SV=1
Length = 493

Score = 67.0 bits (162), Expect = 8e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ PEWPTAFYLQ++AL L ME +A DM+ +GA EA+K
Sbjct: 440 LRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDMLNDGATFEAKK 487


>tr|A3C7I5|A3C7I5_ORYSJ Pyruvate kinase OS=Oryza sativa subsp.
japonica GN=OsJ_031257 PE=3 SV=1
Length = 1177

Score = 67.0 bits (162), Expect = 8e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ PEWPTAFYLQ++AL L ME +A DM+ +GA EA+K
Sbjct: 1124 LRDAMQAQVCMPEWPTAFYLQALALSKLGMETDAQDMLNDGATFEAKK 1171


>tr|B4G0F6|B4G0F6_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 512

Score = 66.2 bits (160), Expect = 1e-09
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ + P+WPTAFY+Q+VAL LNM+ +ATDM+ E + LE ++
Sbjct: 459 LRDAMQAQCVYPDWPTAFYMQAVALAKLNMQSDATDMLNEASQLEEKR 506


>tr|B4FVV1|B4FVV1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 512

Score = 66.2 bits (160), Expect = 1e-09
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ + P+WPTAFY+Q+VAL LNM+ +ATDM+ E + LE ++
Sbjct: 459 LRDAMQAQCVYPDWPTAFYMQAVALAKLNMQSDATDMLNEASQLEEKR 506


>tr|A7P8K5|A7P8K5_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036214001
PE=4 SV=1
Length = 500

Score = 65.9 bits (159), Expect = 2e-09
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEAR--KSGR 155
LRDAMQAQ + P+WPTAFY+QSVAL L+M K+A DM+ E A LE + K GR
Sbjct: 446 LRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAGLEEKRQKGGR 498


>tr|Q10S67|Q10S67_ORYSJ Os03g0132800 protein OS=Oryza sativa subsp.
japonica GN=Os03g0132800 PE=2 SV=1
Length = 531

Score = 65.5 bits (158), Expect = 2e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARKSGR 155
LRDAMQAQ + P+WPTAFY+Q+VAL LNM+ +A DM+ E + LE ++ R
Sbjct: 463 LRDAMQAQCVYPDWPTAFYMQAVALSKLNMQSDAMDMLNEASQLEEKRQER 513


>tr|A9SUZ3|A9SUZ3_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_135687 PE=4 SV=1
Length = 457

Score = 65.5 bits (158), Expect = 2e-09
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
L DAM+AQ ++PEWPTAFY+Q+ AL L ME +A+DM++EGA L+ +K
Sbjct: 404 LSDAMEAQSVHPEWPTAFYMQAAALSRLGMETDASDMLKEGAALDMKK 451


>tr|A5C572|A5C572_VITVI Putative uncharacterized protein (Chromosome
chr2 scaffold_11, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00015778001 PE=4 SV=1
Length = 495

Score = 65.5 bits (158), Expect = 2e-09
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3

Query: 3 LRDAMQAQYINPEWPTAFYLQSVALKMLNMEKEATDMMEEGAILEARK 146
LRDAMQAQ PEWPTAFYLQ++AL L ME +A DM+ +GA EA++
Sbjct: 442 LRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKR 489