DK954588
Clone id TST39A01NGRL0020_N09
Library
Length 626
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_N09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CTGGCTTTCCTTCCTCTCACGTCTATTGGATGCTGCTAAGTATGCACTGACAATGCTCTT
CTGTTCTATGATGTCGTCTTCTCTTCCGAGTAGTAATGTCTCCTCGCTCGCCTCAAGCCT
GCACCTGCAGAACCACAACCCTGTAGGAGCATCTTCATCGACATCAACAGCAACAGTCTT
GTCGCCTCCTCCTCCAGCACCTACCAGCATTCCTAGTCGGCAGCTGCGGACTCCTCATAG
TGGATATCACTTTGATGGATCCAAGCGACGATTCTTTGAGGGCTGGTATTTCAAATTGAC
CCTTCCTGAAGAGAAGACAAGCTTTGCTTTTATTTATACAATCGAAGACCCTGCATTCAG
TGGCAATTACGGCGAAACTGACAGGCGGGAGTATGGGCCAAGGTTCCCAGGAGCAGGAGC
ACAAGTCATGGAAGGCAAAGATAGCTTTCTTTTCCAATACTCTCAGGACACTAGTTCTTT
CTGGGCAAGTAGGCATGAATTGGCTTTGGGAAACACATTTGTAGCTCGACCGGGGCAAAC
ACCTCCAAGGGGGGAAGCCTCTAATGAGGATTTTCTAGCAAGAGTTGAGCAGGGCTATCA
AGTCACTCCAGTCTGGCATCAGGGGT
■■Homology search results ■■ -
sp_hit_id Q94FY7
Definition sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana
Align length 136
Score (bit) 174.0
E-value 4.0e-43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954588|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_N09, 5'
(626 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic OS=Arabid... 174 4e-43
sp|Q94FY8|TOCC_MAIZE Probable tocopherol cyclase, chloroplastic ... 173 7e-43
sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit... 33 1.2

>sp|Q94FY7|TOCC_ARATH Tocopherol cyclase, chloroplastic
OS=Arabidopsis thaliana GN=VTE1 PE=1 SV=1
Length = 488

Score = 174 bits (440), Expect = 4e-43
Identities = 74/136 (54%), Positives = 97/136 (71%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R+LRTPHSGYHFDG+ R+FFEGWYF++++PE++ SF F+Y++E+PAF + + YG
Sbjct: 73 RELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYG 132

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D +L QY QD+ +FW RHEL LGNTF A PG P E E+F
Sbjct: 133 PRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFN 192

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+Q TP WHQG
Sbjct: 193 RRVSEGFQATPFWHQG 208


>sp|Q94FY8|TOCC_MAIZE Probable tocopherol cyclase, chloroplastic
OS=Zea mays GN=SDX1 PE=2 SV=1
Length = 474

Score = 173 bits (438), Expect = 7e-43
Identities = 73/136 (53%), Positives = 99/136 (72%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LRTPHSGYHFDG+ R FFEGWYFK+++PE + SF F+Y++E+P F + D+ Y
Sbjct: 62 RSLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYR 121

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D ++ Q+S+ +++FW SRHEL LGNTF++ TPP+GE +DF
Sbjct: 122 PRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELMLGNTFISNKESTPPQGEVPPQDFS 181

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G QVTP+WHQG
Sbjct: 182 RRVLEGLQVTPIWHQG 197


>sp|Q12VH1|GATA_METBU Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Methanococcoides burtonii (strain DSM 6242) GN=gatA
PE=3 SV=1
Length = 475

Score = 33.1 bits (74), Expect = 1.2
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2

Query: 293 KLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYGPRFPGAGAQVMEGK 439
K+++P K + A YTI S N D YGPR G VM K
Sbjct: 285 KVSMPNTKYALAAYYTIAMSEASSNLARFDGTRYGPRNDGENWHVMASK 333


tr_hit_id A7P598
Definition tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 136
Score (bit) 178.0
E-value 3.0e-43
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954588|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0020_N09, 5'
(626 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome ... 178 3e-43
tr|Q6E6T1|Q6E6T1_SOLTU Tocopherol cyclase OS=Solanum tuberosum G... 175 2e-42
tr|Q0WW11|Q0WW11_ARATH Sucrose export defective 1 OS=Arabidopsis... 174 5e-42
tr|Q6K7V6|Q6K7V6_ORYSJ Os02g0276500 protein OS=Oryza sativa subs... 171 3e-41
tr|B8AFL1|B8AFL1_ORYSI Putative uncharacterized protein OS=Oryza... 171 3e-41
tr|Q1PBH3|Q1PBH3_WHEAT Tocopherol cyclase OS=Triticum aestivum G... 171 3e-41
tr|B7X941|B7X941_HEVBR Tocopherol cyclase OS=Hevea brasiliensis ... 171 3e-41
tr|Q7XAF0|Q7XAF0_EUCGU Tocopherol cyclase OS=Eucalyptus gunnii G... 169 1e-40
tr|Q2XV81|Q2XV81_HELAN Tocopherol cyclase OS=Helianthus annuus G... 169 1e-40
tr|Q2XV80|Q2XV80_HELAN Tocopherol cyclase OS=Helianthus annuus G... 169 1e-40
tr|B2KSJ0|B2KSJ0_SESIN Chloroplast tocopherol cyclase OS=Sesamum... 169 1e-40
tr|Q1PBH4|Q1PBH4_GOSHI Tocopherol cyclase OS=Gossypium hirsutum ... 168 3e-40
tr|B2ZSX9|B2ZSX9_PHAVU Tocopherol cyclase OS=Phaseolus vulgaris ... 167 4e-40
tr|A9SWQ5|A9SWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 162 2e-38
tr|A3A5I4|A3A5I4_ORYSJ Putative uncharacterized protein OS=Oryza... 128 3e-28
tr|Q114L4|Q114L4_TRIEI Tocopherol cyclase OS=Trichodesmium eryth... 117 6e-25
tr|A0YKU8|A0YKU8_9CYAN Putative uncharacterized protein OS=Lyngb... 107 4e-22
tr|B7K7Y9|B7K7Y9_9CHRO Putative uncharacterized protein OS=Cyano... 106 1e-21
tr|B8HJJ8|B8HJJ8_9CHRO Tocopherol cyclase OS=Cyanothece sp. PCC ... 103 1e-20
tr|A8HPF7|A8HPF7_CHLRE Tocopherol cyclase (Fragment) OS=Chlamydo... 101 4e-20
tr|B0C447|B0C447_ACAM1 Tocopherol cyclase, putative OS=Acaryochl... 100 5e-20
tr|Q8Z056|Q8Z056_ANASP All0245 protein OS=Anabaena sp. (strain P... 100 7e-20
tr|B5W9G5|B5W9G5_SPIMA Putative uncharacterized protein OS=Arthr... 100 7e-20
tr|B4VH68|B4VH68_9CYAN Putative uncharacterized protein OS=Micro... 100 7e-20
tr|Q3M9I8|Q3M9I8_ANAVT Tocopherol cyclase OS=Anabaena variabilis... 99 2e-19
tr|Q7NC90|Q7NC90_GLOVI Glr3089 protein OS=Gloeobacter violaceus ... 97 6e-19
tr|B1X1K7|B1X1K7_CYAA5 Putative uncharacterized protein OS=Cyano... 96 1e-18
tr|A0ZJ07|A0ZJ07_NODSP Putative uncharacterized protein OS=Nodul... 96 2e-18
tr|B2J3L9|B2J3L9_NOSP7 Putative uncharacterized protein OS=Nosto... 95 3e-18
tr|Q4CAF9|Q4CAF9_CROWT Putative uncharacterized protein OS=Croco... 95 3e-18

>tr|A7P598|A7P598_VITVI Chromosome chr4 scaffold_6, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00032449001
PE=4 SV=1
Length = 502

Score = 178 bits (451), Expect = 3e-43
Identities = 75/136 (55%), Positives = 102/136 (75%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R+LRTPHSGYHFDGS R+FFEGWYFK+++PE+K SF F+Y++E+PAF G + +YG
Sbjct: 88 RELRTPHSGYHFDGSPRQFFEGWYFKVSIPEQKQSFCFMYSVENPAFQKKLGTFEELQYG 147

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D ++ Q+S+++++FW RHEL LG+TFV R PP E E+F
Sbjct: 148 PRFTGVGAQILGADDKYICQFSEESTNFWGCRHELMLGHTFVGRKDLRPPNKEVPPEEFN 207

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+QVTP+WHQG
Sbjct: 208 RRVIEGFQVTPLWHQG 223


>tr|Q6E6T1|Q6E6T1_SOLTU Tocopherol cyclase OS=Solanum tuberosum
GN=SXD1 PE=2 SV=1
Length = 501

Score = 175 bits (444), Expect = 2e-42
Identities = 74/136 (54%), Positives = 101/136 (74%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LRTPHSGYHFDGS R+FFEGW+FK+++PE + SF F+Y++E P+F+ + +YG
Sbjct: 86 RPLRTPHSGYHFDGSTRKFFEGWFFKVSIPECRQSFCFMYSVESPSFTKKLSSFEELQYG 145

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D ++ QYS+++S+FW SRHEL LGNTFVA+ PP E ++F
Sbjct: 146 PRFTGVGAQILGADDKYICQYSEESSNFWGSRHELMLGNTFVAQNSAKPPNKEVRPQEFN 205

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+QVTP+WHQG
Sbjct: 206 HRVTEGFQVTPLWHQG 221


>tr|Q0WW11|Q0WW11_ARATH Sucrose export defective 1 OS=Arabidopsis
thaliana GN=At4g32770 PE=2 SV=1
Length = 488

Score = 174 bits (440), Expect = 5e-42
Identities = 74/136 (54%), Positives = 97/136 (71%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R+LRTPHSGYHFDG+ R+FFEGWYF++++PE++ SF F+Y++E+PAF + + YG
Sbjct: 73 RELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYG 132

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D +L QY QD+ +FW RHEL LGNTF A PG P E E+F
Sbjct: 133 PRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFN 192

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+Q TP WHQG
Sbjct: 193 RRVSEGFQATPFWHQG 208


>tr|Q6K7V6|Q6K7V6_ORYSJ Os02g0276500 protein OS=Oryza sativa subsp.
japonica GN=P0017G06.29-1 PE=2 SV=1
Length = 470

Score = 171 bits (434), Expect = 3e-41
Identities = 71/136 (52%), Positives = 100/136 (73%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LRTPHSGYH+DG+ R FFEGWYFK+++PE + SF F+Y++E+P F + DR +G
Sbjct: 58 RALRTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHG 117

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
RF G GAQ++ D ++ Q+++ +++FW SRHEL LGNTF+ G TPP GE ++F
Sbjct: 118 SRFTGVGAQILGADDKYICQFTEKSNNFWGSRHELMLGNTFIPNNGSTPPEGEVPPQEFS 177

Query: 578 ARVEQGYQVTPVWHQG 625
+RV +G+QVTP+WHQG
Sbjct: 178 SRVLEGFQVTPIWHQG 193


>tr|B8AFL1|B8AFL1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06739 PE=4 SV=1
Length = 470

Score = 171 bits (434), Expect = 3e-41
Identities = 71/136 (52%), Positives = 100/136 (73%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LRTPHSGYH+DG+ R FFEGWYFK+++PE + SF F+Y++E+P F + DR +G
Sbjct: 58 RALRTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHG 117

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
RF G GAQ++ D ++ Q+++ +++FW SRHEL LGNTF+ G TPP GE ++F
Sbjct: 118 SRFTGVGAQILGADDKYICQFTEKSNNFWGSRHELMLGNTFIPNNGSTPPEGEVPPQEFS 177

Query: 578 ARVEQGYQVTPVWHQG 625
+RV +G+QVTP+WHQG
Sbjct: 178 SRVLEGFQVTPIWHQG 193


>tr|Q1PBH3|Q1PBH3_WHEAT Tocopherol cyclase OS=Triticum aestivum
GN=TC PE=2 SV=1
Length = 467

Score = 171 bits (433), Expect = 3e-41
Identities = 73/136 (53%), Positives = 97/136 (71%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LRTPHSGYH+DG+ R FFEGWYFK+++PE + SF F+Y++E+P F DR YG
Sbjct: 55 RPLRTPHSGYHYDGTARAFFEGWYFKVSIPECRQSFCFMYSVENPFFRDGMTALDRTLYG 114

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
P+F G GAQ++ D ++ Q+S+ +++FW SRHEL LGNTF+ G TPP E ++F
Sbjct: 115 PQFTGVGAQILGADDKYICQFSEKSNNFWGSRHELILGNTFIPNKGSTPPEREIPPQEFS 174

Query: 578 ARVEQGYQVTPVWHQG 625
RV +GYQVTP WHQG
Sbjct: 175 NRVLEGYQVTPTWHQG 190


>tr|B7X941|B7X941_HEVBR Tocopherol cyclase OS=Hevea brasiliensis
GN=tc PE=2 SV=1
Length = 508

Score = 171 bits (433), Expect = 3e-41
Identities = 72/136 (52%), Positives = 99/136 (72%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R+LRTPHSGYHFDG+ R+FFEGWYFK+++PE K SF F+Y++E+PAF + ++G
Sbjct: 94 RELRTPHSGYHFDGTTRQFFEGWYFKVSIPERKESFCFMYSVENPAFRKKLSPLEVAQHG 153

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PR G GAQ++ D ++ QYS+++ +FW SRHEL LGNTFVA G PP E ++F
Sbjct: 154 PRSTGVGAQILGASDKYICQYSEESQNFWGSRHELMLGNTFVAEKGMQPPSKEVPPQEFN 213

Query: 578 ARVEQGYQVTPVWHQG 625
V +G+QVTP+W+QG
Sbjct: 214 RMVSEGFQVTPLWNQG 229


>tr|Q7XAF0|Q7XAF0_EUCGU Tocopherol cyclase OS=Eucalyptus gunnii
GN=Sxd1 PE=2 SV=1
Length = 515

Score = 169 bits (428), Expect = 1e-40
Identities = 69/136 (50%), Positives = 100/136 (73%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R+ RTPHSGYH+DGS R+FFEGWYFK+++PE + SF F+Y++E+PAF + +YG
Sbjct: 101 RESRTPHSGYHWDGSSRKFFEGWYFKVSIPESRQSFCFMYSVENPAFPKKLSALEVAQYG 160

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PR+ G GAQ++ D ++ Q+S+++++FW SRHEL LGNTF+A PP E ++F
Sbjct: 161 PRYTGVGAQILGADDKYICQFSEESANFWGSRHELILGNTFMAEKDAKPPNKEVPPQEFN 220

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+QV+P+WHQG
Sbjct: 221 KRVAEGFQVSPLWHQG 236


>tr|Q2XV81|Q2XV81_HELAN Tocopherol cyclase OS=Helianthus annuus
GN=TC PE=4 SV=1
Length = 483

Score = 169 bits (428), Expect = 1e-40
Identities = 70/136 (51%), Positives = 101/136 (74%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LR PHSGYHFDG+ R+FFEGWYFK+++PE++ SF F+Y++E+PAF + ++ ++G
Sbjct: 67 RPLRPPHSGYHFDGTTRKFFEGWYFKVSIPEQRQSFCFMYSVENPAFKKDLNILEQLQHG 126

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D ++ QYS+++ +FW SRHEL LGN+F + G+ PP E + F
Sbjct: 127 PRFTGVGAQILGAHDKYICQYSKESHNFWGSRHELMLGNSFSVQTGKQPPNSEVPPQVFN 186

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+QVTP+WHQG
Sbjct: 187 QRVIEGFQVTPLWHQG 202


>tr|Q2XV80|Q2XV80_HELAN Tocopherol cyclase OS=Helianthus annuus
GN=TC PE=4 SV=1
Length = 483

Score = 169 bits (428), Expect = 1e-40
Identities = 70/136 (51%), Positives = 101/136 (74%)
Frame = +2

Query: 218 RQLRTPHSGYHFDGSKRRFFEGWYFKLTLPEEKTSFAFIYTIEDPAFSGNYGETDRREYG 397
R LR PHSGYHFDG+ R+FFEGWYFK+++PE++ SF F+Y++E+PAF + ++ ++G
Sbjct: 67 RPLRPPHSGYHFDGTTRKFFEGWYFKVSIPEQRQSFCFMYSVENPAFKKDLNILEQLQHG 126

Query: 398 PRFPGAGAQVMEGKDSFLFQYSQDTSSFWASRHELALGNTFVARPGQTPPRGEASNEDFL 577
PRF G GAQ++ D ++ QYS+++ +FW SRHEL LGN+F + G+ PP E + F
Sbjct: 127 PRFTGVGAQILGAHDKYICQYSKESHNFWGSRHELMLGNSFSVQTGKQPPNSEVPPQVFN 186

Query: 578 ARVEQGYQVTPVWHQG 625
RV +G+QVTP+WHQG
Sbjct: 187 QRVIEGFQVTPLWHQG 202