DK954500 |
Clone id |
TST39A01NGRL0020_J17 |
Library |
TST39 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_J17. 5' end sequence. |
Accession |
DK954500 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL167Contig1 |
Sequence |
GTCGCGGGAGGGAGCGGAAGGAGCAAAGCAATCATGAGCAAGCTTCAGAGCGATGTGCTG AGAGAAGCCATCACGCAGCTCGTGTCGGAATCGAAGGAGAAGAAGAGAAAGTTTGTGGAG ACGGTTGAGCTTCAGATTGGGTTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGC GGGTCAGTTAAGCTCGCACACATCCCGCGACCCAAGATGAAAGTGTGCATGCTAGGAGAT GCCCAGCATGTGGAAGAGGCGGAGAAGATTGGCCTGGATTGTATGGATGTCGATGCGCTG AAGAAAATGAATAAGAATAAGAAGCTTGTGAAGAAGCTGGCAAAGAAGTATCATGCCTTT TTGGCCTCTGAAGCTGTCATTAAGCAGATTCCTCGTCTCCTGGGTCCTGGTTTGAACAAG GCGGGGAAATTCCCTACTCTCGTCTCTCACCAAGAGTCATTGGAGGGGAAATTAAATGAG ACGAAGGCCACTGTTAAATTTCAGCTGAAGAAGGTGCTGTGCATGGGTGTTGCTGTGGGA AACCTTGAAATGGAGGAAAAGCAGCTTTTTCAGAATGTGCAGCTGAGCGTGAACTTTTCT CGTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P59230 |
Definition |
sp|P59230|R10A2_ARATH 60S ribosomal protein L10a-2 OS=Arabidopsis thaliana |
Align length |
188 |
Score (bit) |
292.0 |
E-value |
8.0e-79 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNS9 |
Definition |
tr|A9NNS9|A9NNS9_PICSI Ribosomal protein L1 OS=Picea sitchensis |
Align length |
188 |
Score (bit) |
303.0 |
E-value |
7.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954500|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_J17, 5' (605 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNS9|A9NNS9_PICSI Ribosomal protein L1 OS=Picea sitchensis ... 303 7e-81 tr|B7F9R7|B7F9R7_ORYSJ cDNA, clone: J090077G21, full insert sequ... 300 6e-80 tr|A9NNV9|A9NNV9_PICSI Ribosomal protein L1 OS=Picea sitchensis ... 299 7e-80 tr|B8B9K6|B8B9K6_ORYSI Putative uncharacterized protein OS=Oryza... 296 5e-79 tr|B7F845|B7F845_ORYSJ cDNA clone:J033125C22, full insert sequen... 296 5e-79 tr|B3TLQ8|B3TLQ8_ELAGV Ribosomal protein L10a OS=Elaeis guineens... 296 5e-79 tr|Q6ER67|Q6ER67_ORYSJ Ribosomal protein L1 OS=Oryza sativa subs... 296 6e-79 tr|B7FGL9|B7FGL9_MEDTR Putative uncharacterized protein OS=Medic... 294 2e-78 tr|Q6ZJ04|Q6ZJ04_ORYSJ Ribosomal protein L1 OS=Oryza sativa subs... 292 1e-77 tr|Q5I7L3|Q5I7L3_WHEAT Ribosomal protein L1 OS=Triticum aestivum... 292 1e-77 tr|B6UGK6|B6UGK6_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 289 8e-77 tr|B6SIS5|B6SIS5_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 289 8e-77 tr|B6T8K3|B6T8K3_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 288 1e-76 tr|Q8LR24|Q8LR24_ORYSJ Putative 60S ribosomal protein L10A (Puta... 287 4e-76 tr|A2WX71|A2WX71_ORYSI Putative uncharacterized protein OS=Oryza... 287 4e-76 tr|B4FN28|B4FN28_MAIZE Putative uncharacterized protein OS=Zea m... 285 1e-75 tr|B6T533|B6T533_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 284 2e-75 tr|A9RN42|A9RN42_PHYPA Ribosomal protein L1 OS=Physcomitrella pa... 284 3e-75 tr|A9U1W9|A9U1W9_PHYPA Ribosomal protein L1 OS=Physcomitrella pa... 283 7e-75 tr|A9S177|A9S177_PHYPA Ribosomal protein L1 OS=Physcomitrella pa... 283 7e-75 tr|A3A666|A3A666_ORYSJ Putative uncharacterized protein OS=Oryza... 280 4e-74 tr|B8B9N6|B8B9N6_ORYSI Putative uncharacterized protein OS=Oryza... 278 1e-73 tr|B8AGN8|B8AGN8_ORYSI Putative uncharacterized protein OS=Oryza... 278 2e-73 tr|B6T8C6|B6T8C6_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 278 2e-73 tr|B4FDA7|B4FDA7_MAIZE 60S ribosomal protein L10a-1 OS=Zea mays ... 278 2e-73 tr|A9PI77|A9PI77_POPTR Ribosomal protein L1 OS=Populus trichocar... 276 7e-73 tr|A3BVQ2|A3BVQ2_ORYSJ Putative uncharacterized protein OS=Oryza... 276 7e-73 tr|A9P8Q3|A9P8Q3_POPTR Ribosomal protein L1 OS=Populus trichocar... 276 9e-73 tr|A9PDC6|A9PDC6_POPTR Ribosomal protein L1 OS=Populus trichocar... 275 1e-72 tr|A9P7V2|A9P7V2_POPTR Ribosomal protein L1 OS=Populus trichocar... 274 3e-72
>tr|A9NNS9|A9NNS9_PICSI Ribosomal protein L1 OS=Picea sitchensis PE=2 SV=1 Length = 216
Score = 303 bits (775), Expect = 7e-81 Identities = 153/188 (81%), Positives = 165/188 (87%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSDVLREAI+Q++++SKEK+RKF ET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDVLREAISQVMADSKEKQRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEK+GLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKLGLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLVSHQESLEGK+NETKATVKFQLKKVLCMGVAVGN MEEKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEGKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQIFQ 180
Query: 574 NVQLSVNF 597 NVQLSVNF Sbjct: 181 NVQLSVNF 188
>tr|B7F9R7|B7F9R7_ORYSJ cDNA, clone: J090077G21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 216
Score = 300 bits (767), Expect = 6e-80 Identities = 151/188 (80%), Positives = 163/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSD LREAI+Q+ SES+EK+RKFVET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEK+GLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKATVKFQLKKVLCMGVAVGN MEEKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQ 180
Query: 574 NVQLSVNF 597 NVQ+SVNF Sbjct: 181 NVQMSVNF 188
>tr|A9NNV9|A9NNV9_PICSI Ribosomal protein L1 OS=Picea sitchensis PE=2 SV=1 Length = 216
Score = 299 bits (766), Expect = 7e-80 Identities = 152/188 (80%), Positives = 161/188 (85%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSDVLRE ITQ++ ESK+KKRKF ET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDVLREGITQVMGESKDKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQH+EEAEKI LD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHIEEAEKISLDYMDVEGLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLVSHQESLE K+NETKATVKFQLKKVLCMGVAVGN MEEKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNCGMEEKQVFQ 180
Query: 574 NVQLSVNF 597 NVQLSVNF Sbjct: 181 NVQLSVNF 188
>tr|B8B9K6|B8B9K6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30261 PE=4 SV=1 Length = 216
Score = 296 bits (759), Expect = 5e-79 Identities = 151/188 (80%), Positives = 162/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQS+VL+EAI+Q+V ESKEK RKF ETVELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEKIGLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKATVKFQLKKVLCMGVAVGNL MEEKQ+ Q Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180
Query: 574 NVQLSVNF 597 N+Q+SVNF Sbjct: 181 NIQMSVNF 188
>tr|B7F845|B7F845_ORYSJ cDNA clone:J033125C22, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 216
Score = 296 bits (759), Expect = 5e-79 Identities = 151/188 (80%), Positives = 162/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQS+VL+EAI+Q+V ESKEK RKF ETVELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEKIGLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKATVKFQLKKVLCMGVAVGNL MEEKQ+ Q Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180
Query: 574 NVQLSVNF 597 N+Q+SVNF Sbjct: 181 NIQMSVNF 188
>tr|B3TLQ8|B3TLQ8_ELAGV Ribosomal protein L10a OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 216
Score = 296 bits (759), Expect = 5e-79 Identities = 150/188 (79%), Positives = 161/188 (85%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSDVLREAI+Q+ ++S+EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDVLREAISQITNDSREKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEKIGLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKA VKFQLKKVLCMGVAVGN MEEKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCAMEEKQIFQ 180
Query: 574 NVQLSVNF 597 NVQLSVNF Sbjct: 181 NVQLSVNF 188
>tr|Q6ER67|Q6ER67_ORYSJ Ribosomal protein L1 OS=Oryza sativa subsp. japonica GN=OSJNBa0073A18.28 PE=2 SV=1 Length = 216
Score = 296 bits (758), Expect = 6e-79 Identities = 148/188 (78%), Positives = 163/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSD LREAI+Q+ ++S+EK+RKFVET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 K+KVCMLGDAQHVEEAEK+GLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KLKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKATVKFQLKKVLCMGVAVGN MEEKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQ 180
Query: 574 NVQLSVNF 597 NVQ+SVNF Sbjct: 181 NVQMSVNF 188
>tr|B7FGL9|B7FGL9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 216
Score = 294 bits (753), Expect = 2e-78 Identities = 148/188 (78%), Positives = 163/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQS+ +REAI+ ++++SKEK RKFVET+ELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSEAVREAISGIMADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMK+CMLGDAQHVEEAEKIGL+ MDV+ YHAFLASEAVIKQIP Sbjct: 61 KMKLCMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLVSHQESLEGK+NETKA VKFQLKKVLCMGVAVGN+ M+EKQ+FQ Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEGKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQIFQ 180
Query: 574 NVQLSVNF 597 NVQLSVNF Sbjct: 181 NVQLSVNF 188
>tr|Q6ZJ04|Q6ZJ04_ORYSJ Ribosomal protein L1 OS=Oryza sativa subsp. japonica GN=OJ1150_A11.31 PE=2 SV=1 Length = 216
Score = 292 bits (747), Expect = 1e-77 Identities = 147/188 (78%), Positives = 161/188 (85%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQ++ L+EAI+Q+V++ KEK RKF ETVELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KMKVCMLGDAQHVEEAEKIGLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLV+HQESLE K+NETKATVKFQLKKVLCMGVAVGNL MEEKQ+ Q Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180
Query: 574 NVQLSVNF 597 N+Q+SVNF Sbjct: 181 NIQMSVNF 188
>tr|Q5I7L3|Q5I7L3_WHEAT Ribosomal protein L1 OS=Triticum aestivum PE=2 SV=1 Length = 216
Score = 292 bits (747), Expect = 1e-77 Identities = 145/188 (77%), Positives = 162/188 (86%) Frame = +1
Query: 34 MSKLQSDVLREAITQLVSESKEKKRKFVETVELQIGLKNYDPQKDKRFSGSVKLAHIPRP 213 MSKLQSD +++AITQ+V E++EKKRKF ETVELQIGLKNYDPQKDKRFSGSVKL HIPRP Sbjct: 1 MSKLQSDAVKDAITQIVGEAREKKRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 214 KMKVCMLGDAQHVEEAEKIGLDCMDVDXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 393 KM+VCMLGDAQHV++AEK+GLD MDV+ YHAFLASEA+IKQIP Sbjct: 61 KMRVCMLGDAQHVDQAEKMGLDYMDVESLKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
Query: 394 RLLGPGLNKAGKFPTLVSHQESLEGKLNETKATVKFQLKKVLCMGVAVGNLEMEEKQLFQ 573 RLLGPGLNKAGKFPTLVSHQESLE K+NETKATVKFQLKKVLCMGVAVGNL M+EKQ+ Q Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMDEKQIQQ 180
Query: 574 NVQLSVNF 597 N+Q+SVNF Sbjct: 181 NIQMSVNF 188
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