DK954444 |
Clone id |
TST39A01NGRL0020_H07 |
Library |
TST39 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_H07. 5' end sequence. |
Accession |
DK954444 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGAGGGTGGACAGCTTACTGAAAGGATTCGAAGAAGACCCTACTCTGTTGTCCTGTTTGA TGAAATTGAGAAGGCGCACACTGATGTTTTCAACATTTTCCTTCAGATCTTAGATGATGG AAGGGTGACAGATTCTAAAGGACGGACTGTGAGGTTCAACAATACGATTATCATTATGAC GTCAAATATAGGTTCCCAATATATCCTGAATATAGATACTAATGGTTCAGCCGAAAGCAC CTATGAAGCTATTAAGAACAGGGTATTAGAAGTCGCTAGGGCTACATTCCGGCCAGAGTT CATGAATCGTATTGATGAGTATATTGTTTTCCAACCGTTGAGTCGCGAGCAAATCAACAT GATTGTGAAGTTACAGCTGCAGCGATTGCAAGAGAGGTTGAAGGATAAGAAGATTACCAT TAAAGTTAGTGACAGTGCTGTGCAATTCCTTGGAAGCCTCGGGTACGACCCAAGCTATGG TGCAAGGCCAGTCAAGCGAGTCATTCAGCATAATGTAGAGAATGAACTAGCCCAAGGCAT TTTGCGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8DJ40 |
Definition |
sp|Q8DJ40|CLPB1_THEEB Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) |
Align length |
182 |
Score (bit) |
216.0 |
E-value |
8.0e-56 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4LDR0 |
Definition |
tr|Q4LDR0|Q4LDR0_SOLLC Heat shock protein OS=Solanum lycopersicum |
Align length |
185 |
Score (bit) |
258.0 |
E-value |
1.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954444|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_H07, 5' (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4LDR0|Q4LDR0_SOLLC Heat shock protein OS=Solanum lycopersicu... 258 1e-67 tr|B4FEB1|B4FEB1_MAIZE Putative uncharacterized protein OS=Zea m... 254 2e-66 tr|Q75I57|Q75I57_ORYSJ Putative heat shock protein, 5'-partial (... 252 8e-66 tr|Q75GT3|Q75GT3_ORYSJ Os03g0426900 protein OS=Oryza sativa subs... 252 8e-66 tr|Q10JB2|Q10JB2_ORYSJ Chaperone clpB 1, putative, expressed OS=... 252 8e-66 tr|B8AKD9|B8AKD9_ORYSI Putative uncharacterized protein OS=Oryza... 252 8e-66 tr|A7PN28|A7PN28_VITVI Chromosome chr14 scaffold_21, whole genom... 251 1e-65 tr|Q9LF37|Q9LF37_ARATH ClpB heat shock protein-like OS=Arabidops... 251 2e-65 tr|A5AYX7|A5AYX7_VITVI Putative uncharacterized protein OS=Vitis... 249 5e-65 tr|A9TAU3|A9TAU3_PHYPA Predicted protein OS=Physcomitrella paten... 244 3e-63 tr|B4FL89|B4FL89_MAIZE Putative uncharacterized protein OS=Zea m... 224 2e-57 tr|A9SLH7|A9SLH7_PHYPA Predicted protein (Fragment) OS=Physcomit... 224 3e-57 tr|A7P5X9|A7P5X9_VITVI Chromosome chr4 scaffold_6, whole genome ... 223 7e-57 tr|Q0E3C8|Q0E3C8_ORYSJ Os02g0181900 protein OS=Oryza sativa subs... 221 1e-56 tr|B8AIX1|B8AIX1_ORYSI Putative uncharacterized protein OS=Oryza... 221 1e-56 tr|A3A3U0|A3A3U0_ORYSJ Putative uncharacterized protein OS=Oryza... 221 1e-56 tr|Q9LLI0|Q9LLI0_PHALU ClpB OS=Phaseolus lunatus GN=clpB PE=2 SV=1 221 3e-56 tr|Q8VYJ7|Q8VYJ7_ARATH At2g25140/F13D4.100 OS=Arabidopsis thalia... 218 1e-55 tr|A0YNR3|A0YNR3_9CYAN ATPase OS=Lyngbya sp. PCC 8106 GN=L8106_1... 213 4e-54 tr|Q3MAN3|Q3MAN3_ANAVT ATPase OS=Anabaena variabilis (strain ATC... 210 3e-53 tr|A0ZAN2|A0ZAN2_NODSP ATPase OS=Nodularia spumigena CCY 9414 GN... 210 3e-53 tr|B8HLU8|B8HLU8_9CHRO ATP-dependent chaperone ClpB OS=Cyanothec... 210 4e-53 tr|B5W0X8|B5W0X8_SPIMA ATP-dependent chaperone ClpB OS=Arthrospi... 210 4e-53 tr|Q5N4W9|Q5N4W9_SYNP6 ClpB protein OS=Synechococcus sp. (strain... 209 1e-52 tr|Q118T1|Q118T1_TRIEI ATPase AAA-2 OS=Trichodesmium erythraeum ... 207 2e-52 tr|B2IUM0|B2IUM0_NOSP7 ATPase AAA-2 domain protein OS=Nostoc pun... 207 2e-52 tr|B0BZT0|B0BZT0_ACAM1 Chaperone ClpB OS=Acaryochloris marina (s... 207 3e-52 tr|B1XJP5|B1XJP5_SYNP2 Endopeptidase Clp ATP-binding chain B1 OS... 207 4e-52 tr|B4WPJ7|B4WPJ7_9SYNE ATPase, AAA family OS=Synechococcus sp. P... 207 4e-52 tr|A4RY55|A4RY55_OSTLU Chaperone, Hsp100 family, ClpB-type OS=Os... 206 6e-52
>tr|Q4LDR0|Q4LDR0_SOLLC Heat shock protein OS=Solanum lycopersicum GN=Lehsp100/ClpB PE=2 SV=1 Length = 980
Score = 258 bits (660), Expect = 1e-67 Identities = 129/185 (69%), Positives = 151/185 (81%), Gaps = 3/185 (1%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPY+V+LFDEIEKAH+DVFN+FLQILDDGRVTDS+GRTV F NT+IIMT Sbjct: 745 EGGQLTEIVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMT 804
Query: 182 SNIGSQYILNIDTN---GSAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQ 352 SN+GSQYILN D N S E+TY+ IK RV++ ARA FRPEFMNR+DEYIVFQPL R+Q Sbjct: 805 SNVGSQYILNTDDNDDDSSKEATYQTIKQRVMDAARAVFRPEFMNRVDEYIVFQPLDRDQ 864
Query: 353 INMIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELA 532 I+ IV + I+VS++A+Q LGSLGYDP+YGARPVKRVIQ NVENELA Sbjct: 865 ISSIVRLQLERVQQRLADRKMKIQVSEAAIQLLGSLGYDPNYGARPVKRVIQQNVENELA 924
Query: 533 QGILR 547 +GILR Sbjct: 925 KGILR 929
>tr|B4FEB1|B4FEB1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 492
Score = 254 bits (649), Expect = 2e-66 Identities = 129/183 (70%), Positives = 148/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYSVVLFDEIEKAH DVFN+FLQILDDGRVTDS+GR V F N+IIIMT Sbjct: 260 EGGQLTEAVRRRPYSVVLFDEIEKAHLDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMT 319
Query: 182 SNIGSQYILNIDT-NGSAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQYILN+D +GS++S YE IK RV++ AR+ FRPEFMNR+DEYIVF+PL REQIN Sbjct: 320 SNVGSQYILNMDEEDGSSDSAYENIKRRVMDAARSVFRPEFMNRVDEYIVFKPLEREQIN 379
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV I + VS A++FLGSLGYDP+YGARPVKRVIQ VENELA+G Sbjct: 380 SIVKLQLARVQKRIADRKIKLDVSPGAIEFLGSLGYDPNYGARPVKRVIQQYVENELAKG 439
Query: 539 ILR 547 ILR Sbjct: 440 ILR 442
>tr|Q75I57|Q75I57_ORYSJ Putative heat shock protein, 5'-partial (Fragment) OS=Oryza sativa subsp. japonica GN=OSJNBa0083F15.25 PE=3 SV=1 Length = 736
Score = 252 bits (644), Expect = 8e-66 Identities = 128/183 (69%), Positives = 147/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYS++LFDEIEKAH DVFN+FLQILDDGRVTDS+GR V F N+IIIMT Sbjct: 503 EGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMT 562
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQ+ILN+D G S +S YE IK RV++ AR+ FRPEFMNRIDEYIVF+PL REQIN Sbjct: 563 SNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLEREQIN 622
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV I ++VS AV+FLGSLGYDP+YGARPVKRVIQ VENELA+G Sbjct: 623 SIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENELAKG 682
Query: 539 ILR 547 ILR Sbjct: 683 ILR 685
>tr|Q75GT3|Q75GT3_ORYSJ Os03g0426900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020H02.1 PE=2 SV=1 Length = 978
Score = 252 bits (644), Expect = 8e-66 Identities = 128/183 (69%), Positives = 147/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYS++LFDEIEKAH DVFN+FLQILDDGRVTDS+GR V F N+IIIMT Sbjct: 745 EGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMT 804
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQ+ILN+D G S +S YE IK RV++ AR+ FRPEFMNRIDEYIVF+PL REQIN Sbjct: 805 SNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLEREQIN 864
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV I ++VS AV+FLGSLGYDP+YGARPVKRVIQ VENELA+G Sbjct: 865 SIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENELAKG 924
Query: 539 ILR 547 ILR Sbjct: 925 ILR 927
>tr|Q10JB2|Q10JB2_ORYSJ Chaperone clpB 1, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g31300 PE=3 SV=1 Length = 814
Score = 252 bits (644), Expect = 8e-66 Identities = 128/183 (69%), Positives = 147/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYS++LFDEIEKAH DVFN+FLQILDDGRVTDS+GR V F N+IIIMT Sbjct: 581 EGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMT 640
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQ+ILN+D G S +S YE IK RV++ AR+ FRPEFMNRIDEYIVF+PL REQIN Sbjct: 641 SNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLEREQIN 700
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV I ++VS AV+FLGSLGYDP+YGARPVKRVIQ VENELA+G Sbjct: 701 SIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENELAKG 760
Query: 539 ILR 547 ILR Sbjct: 761 ILR 763
>tr|B8AKD9|B8AKD9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12134 PE=4 SV=1 Length = 964
Score = 252 bits (644), Expect = 8e-66 Identities = 128/183 (69%), Positives = 147/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYS++LFDEIEKAH DVFN+FLQILDDGRVTDS+GR V F N+IIIMT Sbjct: 731 EGGQLTEAVRRRPYSIILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRKVSFTNSIIIMT 790
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQ+ILN+D G S +S YE IK RV++ AR+ FRPEFMNRIDEYIVF+PL REQIN Sbjct: 791 SNVGSQFILNMDEEGGSTDSAYENIKKRVMDAARSVFRPEFMNRIDEYIVFKPLEREQIN 850
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV I ++VS AV+FLGSLGYDP+YGARPVKRVIQ VENELA+G Sbjct: 851 SIVKLQLARVQKRIADRKIKLEVSPGAVEFLGSLGYDPNYGARPVKRVIQQYVENELAKG 910
Query: 539 ILR 547 ILR Sbjct: 911 ILR 913
>tr|A7PN28|A7PN28_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021042001 PE=3 SV=1 Length = 888
Score = 251 bits (642), Expect = 1e-65 Identities = 124/183 (67%), Positives = 149/183 (81%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPY+V+LFDEIEKAH+DVFN+FLQILDDGRVTDS+GRTV F NT+IIMT Sbjct: 654 EGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMT 713
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQYILN+D E+ YE IK RV++ AR+ FRPEFMNR+DEYIVFQPL R+QI+ Sbjct: 714 SNVGSQYILNMDDETLPKETAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQIS 773
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV + ++V+++A+Q LGSLGYDP+YGARPVKRVIQ NVENELA+G Sbjct: 774 SIVKLQLERVQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKG 833
Query: 539 ILR 547 ILR Sbjct: 834 ILR 836
>tr|Q9LF37|Q9LF37_ARATH ClpB heat shock protein-like OS=Arabidopsis thaliana GN=T20K14_60 PE=3 SV=1 Length = 968
Score = 251 bits (641), Expect = 2e-65 Identities = 124/182 (68%), Positives = 145/182 (79%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPYSV+LFDEIEKAH DVFN+FLQILDDGRVTDS+GRTV F NT+IIMT Sbjct: 738 EGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMT 797
Query: 182 SNIGSQYILNIDTNGSAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQINM 361 SN+GSQ+ILN + + E +YE IK RV+ AR+ FRPEFMNR+DEYIVF+PL REQIN Sbjct: 798 SNVGSQFILNNTDDDANELSYETIKERVMNAARSIFRPEFMNRVDEYIVFKPLDREQINR 857
Query: 362 IVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQGI 541 IV + I ++D+AV LGSLGYDP+YGARPVKRVIQ N+ENELA+GI Sbjct: 858 IVRLQLARVQKRIADRKMKINITDAAVDLLGSLGYDPNYGARPVKRVIQQNIENELAKGI 917
Query: 542 LR 547 LR Sbjct: 918 LR 919
>tr|A5AYX7|A5AYX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009951 PE=3 SV=1 Length = 790
Score = 249 bits (637), Expect = 5e-65 Identities = 123/183 (67%), Positives = 148/183 (80%), Gaps = 1/183 (0%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPY+V+LFDEIEKAH+DVFN+FLQILDDGRVTDS+GRTV F NT+ IMT Sbjct: 556 EGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVXIMT 615
Query: 182 SNIGSQYILNIDTNG-SAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQIN 358 SN+GSQYILN+D E+ YE IK RV++ AR+ FRPEFMNR+DEYIVFQPL R+QI+ Sbjct: 616 SNVGSQYILNMDBETLPKETAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQIS 675
Query: 359 MIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELAQG 538 IV + ++V+++A+Q LGSLGYDP+YGARPVKRVIQ NVENELA+G Sbjct: 676 SIVKLQLERVQLRLADRKMKLQVTETAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKG 735
Query: 539 ILR 547 ILR Sbjct: 736 ILR 738
>tr|A9TAU3|A9TAU3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193192 PE=3 SV=1 Length = 909
Score = 244 bits (622), Expect = 3e-63 Identities = 125/185 (67%), Positives = 146/185 (78%), Gaps = 3/185 (1%) Frame = +2
Query: 2 EGGQLTERIRRRPYSVVLFDEIEKAHTDVFNIFLQILDDGRVTDSKGRTVRFNNTIIIMT 181 EGGQLTE +RRRPY+V+LFDEIEKAH+DVFNIFLQILDDGRVTDS+GRTV F NT+IIMT Sbjct: 670 EGGQLTEAVRRRPYAVILFDEIEKAHSDVFNIFLQILDDGRVTDSQGRTVSFTNTVIIMT 729
Query: 182 SNIGSQYILNIDTN---GSAESTYEAIKNRVLEVARATFRPEFMNRIDEYIVFQPLSREQ 352 SN+GS Y+LN + S E YEA++ RV+E AR TFRPEFMNRIDEYIVFQ L R+Q Sbjct: 730 SNVGSHYVLNSADSMAGNSKEVIYEAMRARVMEAARNTFRPEFMNRIDEYIVFQQLDRDQ 789
Query: 353 INMIVXXXXXXXXXXXXXXXITIKVSDSAVQFLGSLGYDPSYGARPVKRVIQHNVENELA 532 I+ IV IT+KV++SA+Q L SLGYDP+YGARPVKRVIQ +VENELA Sbjct: 790 ISRIVRIQLDRVQKRLSDRKITLKVTESAIQLLASLGYDPNYGARPVKRVIQQSVENELA 849
Query: 533 QGILR 547 + ILR Sbjct: 850 RSILR 854
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