DK954442 |
Clone id |
TST39A01NGRL0020_H05 |
Library |
TST39 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_H05. 5' end sequence. |
Accession |
DK954442 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTTCTGCGTTCTCCTTCCTCGAGATCGTCCTCACAGAGCCTTCACTGGCTTTCTAGTACG CAGAGGAAGTTTGAAAGACTATACACTGCACTAAGATCGCCTGCTCTTTCAAAGAATTCC TTTCTTCCTCGACGTGGAACGCTCGAGTTCCACCTCAGAGCCTTCCATGGAAGACTGGAA AGCTTCTGTCAGAAGTGGCGGCTCCTTGCGTCAAGTATCCCTGGAGAATGGCGTCAATGG CTGGGCCTCTCCTCCAGGTGATTTTTTCAATGCTCGAGGCCTCCATTATTTCTCAAAGAA GCAGAAGCTACCTGCAGGTGAGTGCCTTCTTCAACCCCTGGGGGTAGACTGGTTGAAATC TCACAGCAAGCTCGACCATTTCCTTGCCCACCCGGATAATCGGGTTATGAGGGCCCTAAG AGCTGCACAGGTGAAGCAGGATCCCCCTCTTAAGGCCTTCATTCTAGCCATTAATTTGCA AGTACCTGGTCGAGAACAACATAGTGCAGTATTCTACTTTGTCACAGAAGAAGCAATTCC CCATGGCTCTCTTCTTCATCGCTTCATCCATGGTGATGATGCCTTCAGAAACAGCAGATT CA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3KH21 |
Definition |
sp|Q3KH21|KUP_PSEPF Probable potassium transport system protein kup OS=Pseudomonas fluorescens (strain Pf0-1) |
Align length |
42 |
Score (bit) |
38.1 |
E-value |
0.035 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQU3 |
Definition |
tr|B8LQU3|B8LQU3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
151 |
Score (bit) |
194.0 |
E-value |
3.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954442|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_H05, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQU3|B8LQU3_PICSI Putative uncharacterized protein OS=Picea... 194 3e-48 tr|A9NVR7|A9NVR7_PICSI Putative uncharacterized protein OS=Picea... 192 1e-47 tr|A5BBW3|A5BBW3_VITVI Putative uncharacterized protein OS=Vitis... 191 4e-47 tr|Q9LEW4|Q9LEW4_ARATH Putative uncharacterized protein T30N20_2... 187 4e-46 tr|Q8LD05|Q8LD05_ARATH Putative uncharacterized protein OS=Arabi... 187 4e-46 tr|Q8L723|Q8L723_ARATH Putative uncharacterized protein At5g1075... 187 4e-46 tr|A9SRL7|A9SRL7_PHYPA Predicted protein (Fragment) OS=Physcomit... 182 2e-44 tr|A9T0K1|A9T0K1_PHYPA Predicted protein (Fragment) OS=Physcomit... 180 6e-44 tr|A2YGM2|A2YGM2_ORYSI Putative uncharacterized protein OS=Oryza... 162 1e-38 tr|B4F841|B4F841_MAIZE Lipid binding protein OS=Zea mays PE=2 SV=1 158 2e-37 tr|Q3E7D9|Q3E7D9_ARATH Uncharacterized protein At5g25010.1 OS=Ar... 149 1e-34 tr|Q94AK1|Q94AK1_ARATH Putative uncharacterized protein At5g2499... 143 9e-33 tr|A7QM98|A7QM98_VITVI Chromosome chr5 scaffold_124, whole genom... 142 1e-32 tr|B4FTY5|B4FTY5_MAIZE Putative uncharacterized protein OS=Zea m... 135 2e-30 tr|Q7EYH4|Q7EYH4_ORYSJ Os08g0152600 protein OS=Oryza sativa subs... 134 5e-30 tr|B6TCG2|B6TCG2_MAIZE Lipid binding protein OS=Zea mays PE=2 SV=1 133 7e-30 tr|A3BPP7|A3BPP7_ORYSJ Putative uncharacterized protein OS=Oryza... 130 4e-29 tr|A2YR98|A2YR98_ORYSI Putative uncharacterized protein OS=Oryza... 130 4e-29 tr|Q9LNE2|Q9LNE2_ARATH T21E18.10 protein OS=Arabidopsis thaliana... 120 8e-26 tr|Q8L8L4|Q8L8L4_ARATH Putative uncharacterized protein OS=Arabi... 117 5e-25 tr|A3BF17|A3BF17_ORYSJ Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|Q8GXA5|Q8GXA5_ARATH Putative uncharacterized protein OS=Arabi... 109 1e-22 tr|A9SP55|A9SP55_PHYPA Predicted protein OS=Physcomitrella paten... 108 3e-22 tr|A7QN83|A7QN83_VITVI Chromosome undetermined scaffold_131, who... 102 1e-20 tr|Q9FH45|Q9FH45_ARATH Arabidopsis thaliana genomic DNA, chromos... 100 8e-20 tr|Q8VZF6|Q8VZF6_ARATH AT5g45560/MFC19_23 OS=Arabidopsis thalian... 100 8e-20 tr|Q56W91|Q56W91_ARATH Putative uncharacterized protein At4g1904... 100 1e-19 tr|B3H6R3|B3H6R3_ARATH Uncharacterized protein At4g19040.2 OS=Ar... 100 1e-19 tr|A9U1T4|A9U1T4_PHYPA Predicted protein OS=Physcomitrella paten... 98 3e-19 tr|A7QHC7|A7QHC7_VITVI Chromosome chr2 scaffold_97, whole genome... 98 3e-19
>tr|B8LQU3|B8LQU3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 194 bits (494), Expect = 3e-48 Identities = 91/151 (60%), Positives = 118/151 (78%), Gaps = 1/151 (0%) Frame = +2
Query: 152 TSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECLL 331 + + ++DWK VR G LR+V+ + GV+GW+SP GD F+ RG YFSK+QK+P+GE ++ Sbjct: 2 SGDRKVQDWKEQVRKSGPLREVNPDKGVDGWSSPVGDVFSVRGADYFSKRQKIPSGEWMM 61
Query: 332 QPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGRE-QHSA 508 +PLG+DWL+S ++LDH LA PDNR M LR AQ + LKAF+ A+NLQVPGRE QHSA Sbjct: 62 KPLGMDWLRSSARLDHVLARPDNRAMATLRRAQ-GEGRALKAFVFAVNLQVPGREQQHSA 120
Query: 509 VFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 VFY+ TE+ IP GSLL+RF+HGDDAFRNSRF Sbjct: 121 VFYYATEDPIPPGSLLYRFVHGDDAFRNSRF 151
>tr|A9NVR7|A9NVR7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 320
Score = 192 bits (489), Expect = 1e-47 Identities = 92/151 (60%), Positives = 115/151 (76%) Frame = +2
Query: 149 STSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECL 328 S ++P + DWK + GGSL+QV E+G+NGW+SPPG+ F+ RG +YF+KKQK+PAG+ L Sbjct: 9 SATDPEI-DWKEEILRGGSLQQVDPEDGINGWSSPPGNLFHVRGSNYFTKKQKVPAGDWL 67
Query: 329 LQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSA 508 L+PLG+DWLK+ SKLDH L PDNRVM AL A LK F+ A+NLQVPGRE HSA Sbjct: 68 LKPLGMDWLKAGSKLDHVLGRPDNRVMAALSKAN-SDGKGLKTFVFAVNLQVPGREPHSA 126
Query: 509 VFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 VFY+ T++ IP GSL +RFIH DD FRNSRF Sbjct: 127 VFYYATDDPIPVGSLFYRFIHEDDHFRNSRF 157
>tr|A5BBW3|A5BBW3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035882 PE=4 SV=1 Length = 305
Score = 191 bits (484), Expect = 4e-47 Identities = 95/153 (62%), Positives = 113/153 (73%) Frame = +2
Query: 143 SSSTSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGE 322 S S S+ S DW+ +GGSLR V L +G NGWASPPGD F+ R +YF++KQK P+G+ Sbjct: 13 SGSVSKQS-SDWREEAINGGSLRHVDLHHGSNGWASPPGDLFSLRSKNYFTRKQKSPSGD 71
Query: 323 CLLQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQH 502 LL+P G DWL+S SKLD+ LA PDNRV ALR AQ + KAFI A+N+QVPGRE H Sbjct: 72 WLLKPAGFDWLRSTSKLDNVLARPDNRVAHALRKAQ-SLNRSQKAFIFAVNIQVPGREHH 130
Query: 503 SAVFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 SAVFYF TE+ IP GSL +RFIHGDDAFRN RF Sbjct: 131 SAVFYFATEDPIPPGSLFYRFIHGDDAFRNQRF 163
>tr|Q9LEW4|Q9LEW4_ARATH Putative uncharacterized protein T30N20_20 (At5g10750) OS=Arabidopsis thaliana GN=T30N20_20 PE=2 SV=1 Length = 302
Score = 187 bits (475), Expect = 4e-46 Identities = 91/151 (60%), Positives = 111/151 (73%) Frame = +2
Query: 149 STSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECL 328 S S ++ +W +GGSLR+V + G +GWASPPGD F+ R Y SKKQK PAG+ L Sbjct: 22 SASSSAIPEWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYL 81
Query: 329 LQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSA 508 L P G+DWLKS +KL++ LA PDNRV ALR AQ + LK+FI A+NLQ+PG++ HSA Sbjct: 82 LSPAGMDWLKSSTKLENALARPDNRVAHALRKAQ-SRGQSLKSFIFAVNLQIPGKDHHSA 140
Query: 509 VFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 VFYF TEE IP GSLLHRFI+GDDAFRN RF Sbjct: 141 VFYFATEEPIPSGSLLHRFINGDDAFRNQRF 171
>tr|Q8LD05|Q8LD05_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 302
Score = 187 bits (475), Expect = 4e-46 Identities = 91/151 (60%), Positives = 111/151 (73%) Frame = +2
Query: 149 STSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECL 328 S S ++ +W +GGSLR+V + G +GWASPPGD F+ R Y SKKQK PAG+ L Sbjct: 22 SGSSSAISEWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYL 81
Query: 329 LQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSA 508 L P G+DWLKS +KL++ LA PDNRV ALR AQ + LK+FI A+NLQ+PG++ HSA Sbjct: 82 LSPAGMDWLKSSTKLENVLARPDNRVAHALRKAQ-SRGQSLKSFIFAVNLQIPGKDHHSA 140
Query: 509 VFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 VFYF TEE IP GSLLHRFI+GDDAFRN RF Sbjct: 141 VFYFATEEPIPSGSLLHRFINGDDAFRNQRF 171
>tr|Q8L723|Q8L723_ARATH Putative uncharacterized protein At5g10750 OS=Arabidopsis thaliana GN=At5g10750 PE=2 SV=1 Length = 302
Score = 187 bits (475), Expect = 4e-46 Identities = 91/151 (60%), Positives = 111/151 (73%) Frame = +2
Query: 149 STSEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECL 328 S S ++ +W +GGSLR+V + G +GWASPPGD F+ R Y SKKQK PAG+ L Sbjct: 22 SASSSAIPEWITESTNGGSLRRVDPDTGTDGWASPPGDVFSLRSDSYLSKKQKTPAGDYL 81
Query: 329 LQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSA 508 L P G+DWLKS +KL++ LA PDNRV ALR AQ + LK+FI A+NLQ+PG++ HSA Sbjct: 82 LSPAGMDWLKSSTKLENALARPDNRVAHALRKAQ-SRGQSLKSFIFAVNLQIPGKDHHSA 140
Query: 509 VFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 VFYF TEE IP GSLLHRFI+GDDAFRN RF Sbjct: 141 VFYFATEEPIPSGSLLHRFINGDDAFRNQRF 171
>tr|A9SRL7|A9SRL7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_16975 PE=4 SV=1 Length = 241
Score = 182 bits (461), Expect = 2e-44 Identities = 90/143 (62%), Positives = 104/143 (72%) Frame = +2
Query: 173 DWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECLLQPLGVDW 352 DW V GGSLR V LE+G +GWASP F RGL+YF KK K P E LL+PLGVDW Sbjct: 1 DWVKEVLEGGSLRNVELEDGEHGWASPQASLFMVRGLNYFQKKLKTPCSEALLEPLGVDW 60
Query: 353 LKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSAVFYFVTEE 532 L+S+ KLDH LAHP NRVM+A A + +FI+AINLQVPG++ HSAVFYFVT+E Sbjct: 61 LRSNGKLDHVLAHPGNRVMQAFEKA--SGEARKTSFIVAINLQVPGKDHHSAVFYFVTDE 118
Query: 533 AIPHGSLLHRFIHGDDAFRNSRF 601 I GSLL+RFIH DDAFRNSRF Sbjct: 119 PIVEGSLLYRFIHQDDAFRNSRF 141
>tr|A9T0K1|A9T0K1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_16944 PE=4 SV=1 Length = 242
Score = 180 bits (456), Expect = 6e-44 Identities = 88/144 (61%), Positives = 110/144 (76%), Gaps = 1/144 (0%) Frame = +2
Query: 173 DWKASVRSGGSLRQVSL-ENGVNGWASPPGDFFNARGLHYFSKKQKLPAGECLLQPLGVD 349 DW VR GGSLR V L ++GV+GWASPP F RG +YF KK K+P E LL+PLGVD Sbjct: 1 DWVKEVREGGSLRNVELRDDGVHGWASPPAGLFMVRGANYFQKKVKVPCSEMLLEPLGVD 60
Query: 350 WLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGREQHSAVFYFVTE 529 WL+S++KLDH LAHP+NRVM+ L+ ++ ++ +FILAINLQV ++ HSAVFYF+T+ Sbjct: 61 WLRSNAKLDHVLAHPENRVMQVLQ--KLSEEARKTSFILAINLQVSSKKHHSAVFYFMTD 118
Query: 530 EAIPHGSLLHRFIHGDDAFRNSRF 601 E I GSLLHRFIHG+DAF NSRF Sbjct: 119 EPIVEGSLLHRFIHGNDAFWNSRF 142
>tr|A2YGM2|A2YGM2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24331 PE=4 SV=1 Length = 325
Score = 162 bits (410), Expect = 1e-38 Identities = 87/162 (53%), Positives = 107/162 (66%), Gaps = 13/162 (8%) Frame = +2
Query: 155 SEPSMEDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFS-----------KK 301 +E + W+ SG SLRQV LE G NGWASPPGD F+ R YFS ++ Sbjct: 8 AEEQQQGWREEAVSGASLRQVDLERGANGWASPPGDLFHLRARGYFSGGGGGGGGGGGRR 67
Query: 302 QKLP-AGECLLQPLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINL 478 K P A E LL+P GVDWL+SHS+LDH LA D V A R A++++DP F+LA+NL Sbjct: 68 GKAPSAAEWLLRPAGVDWLRSHSRLDHVLARDDIPVAAAFRRARLRKDPSAH-FLLAVNL 126
Query: 479 QVPGR-EQHSAVFYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 QVPGR + +SAVFYF E AIP SLL RF+HGDDA+RN+RF Sbjct: 127 QVPGRPDAYSAVFYFAAEAAIPAESLLGRFVHGDDAYRNARF 168
>tr|B4F841|B4F841_MAIZE Lipid binding protein OS=Zea mays PE=2 SV=1 Length = 324
Score = 158 bits (400), Expect = 2e-37 Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 6/150 (4%) Frame = +2
Query: 170 EDWKASVRSGGSLRQVSLENGVNGWASPPGDFFNARGLHYFS----KKQKLP-AGECLLQ 334 + W+ + SLR V L+ G NGWASPPGD F+ R YFS K+ K P A + LL+ Sbjct: 19 KSWREEAVAACSLRLVDLDRGTNGWASPPGDLFHLRARGYFSSGGGKRGKAPSAADWLLR 78
Query: 335 PLGVDWLKSHSKLDHFLAHPDNRVMRALRAAQVKQDPPLKAFILAINLQVPGR-EQHSAV 511 P GVDWL+SH++LDH LA DNRV A R A++++DP F+LA+NLQVPGR + +SAV Sbjct: 79 PAGVDWLRSHARLDHVLARDDNRVAAAFRRARLRKDPSAH-FLLAVNLQVPGRPDAYSAV 137
Query: 512 FYFVTEEAIPHGSLLHRFIHGDDAFRNSRF 601 FYF E IP SLL RFIHGDDA+RN+RF Sbjct: 138 FYFAAEAPIPPDSLLGRFIHGDDAYRNARF 167
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