DK954411 |
Clone id |
TST39A01NGRL0020_F22 |
Library |
TST39 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_F22. 5' end sequence. |
Accession |
DK954411 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAAAGACAACAGAGAAGAAAGGAACTGTTACTATCATTGGTGAGGGTACTGTTTTTTCTG AGAAAGCTCTTCCTCCTCAAGCAAAATACGTTGTAAATAAACATCAGATGCAAAGAAAGT ATCACCCAACAGAAGCCAACTTTCAAGACGAGCAAGATGATGACGAACCCACTCATGCTA AACCTGCCCCTCAAATCAAACTTATGTCTGATTTTTTCAAACCTAGTGGTACAATGACTG TACAAGCTGATGATGAAATGAATGCTGATGAGTGTTTGGAGGCTGCAAAAAATAACCTCC AACTTTTCAAAGAAACTTCTGGAGAGGCCGACTTACAACAAACGATTCTCGAAAATTGTC GAAAAATTCGAAACCACCTTGCCCGATTTATCGAGGAATTTGCCGAATCGGAAGATAGTA GATTGGCCACTGCAATGGATTATTTTGATCAAATTTCAGCTGTTTGTTAAATGTCATTTA ATTGTATTTTAGTTTGTATTAATATTAATATTGTATTTATTCCAAAAAAAAAAAAAAAAA AAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8ND24 |
Definition |
sp|Q8ND24|RN214_HUMAN RING finger protein 214 OS=Homo sapiens |
Align length |
106 |
Score (bit) |
32.7 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q91847 |
Definition |
tr|Q91847|Q91847_XENLA Secretogranin III OS=Xenopus laevis |
Align length |
131 |
Score (bit) |
39.7 |
E-value |
0.09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954411|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_F22, 5' (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q91847|Q91847_XENLA Secretogranin III OS=Xenopus laevis PE=2 ... 40 0.090 tr|Q6GLW5|Q6GLW5_XENLA Scg3-A protein OS=Xenopus laevis GN=scg3 ... 40 0.090 tr|Q6CT84|Q6CT84_KLULA KLLA0C14630p OS=Kluyveromyces lactis GN=K... 38 0.26 tr|Q16ES1|Q16ES1_AEDAE Transcription factor IIIA, putative OS=Ae... 38 0.34 tr|B7GCG8|B7GCG8_PHATR Predicted protein OS=Phaeodactylum tricor... 37 0.45 tr|B3NJR3|B3NJR3_DROER GG22045 OS=Drosophila erecta GN=GG22045 P... 37 0.77 tr|A3I0J7|A3I0J7_9SPHI ABC transporter, ATP-binding protein OS=A... 36 1.00 tr|B0P2M2|B0P2M2_9CLOT Putative uncharacterized protein OS=Clost... 35 2.2 tr|Q16H54|Q16H54_AEDAE Transcription factor IIIA, putative OS=Ae... 35 2.9 tr|B6LR51|B6LR51_BRAFL Putative uncharacterized protein OS=Branc... 35 2.9 tr|B6L1P8|B6L1P8_BRAFL Putative uncharacterized protein OS=Branc... 35 2.9 tr|B0X9K2|B0X9K2_CULQU Repressor OS=Culex quinquefasciatus GN=Cp... 35 2.9 tr|Q4K188|Q4K188_STRPN Oligosaccharide repeat unit polymerase Wz... 34 3.8 tr|Q8IC27|Q8IC27_PLAF7 Putative uncharacterized protein PF07_001... 34 3.8 tr|Q21436|Q21436_CAEEL Protein K12D12.2, partially confirmed by ... 34 5.0 tr|B0E6N1|B0E6N1_ENTDI Putative uncharacterized protein OS=Entam... 34 5.0 tr|Q4P2U9|Q4P2U9_USTMA Putative uncharacterized protein OS=Ustil... 34 5.0 tr|A1CDM3|A1CDM3_ASPCL Putative uncharacterized protein OS=Asper... 34 5.0 tr|Q99U47|Q99U47_STAAM Putative uncharacterized protein OS=Staph... 33 6.5 tr|Q8NWQ1|Q8NWQ1_STAAW Putative uncharacterized protein MW1330 O... 33 6.5 tr|Q7A5L6|Q7A5L6_STAAN Putative uncharacterized protein SA1274 O... 33 6.5 tr|Q6GGW7|Q6GGW7_STAAR Putative uncharacterized protein OS=Staph... 33 6.5 tr|Q6G9C1|Q6G9C1_STAAS Putative uncharacterized protein OS=Staph... 33 6.5 tr|Q5HFY2|Q5HFY2_STAAC Putative uncharacterized protein OS=Staph... 33 6.5 tr|Q2FYJ0|Q2FYJ0_STAA8 Putative uncharacterized protein OS=Staph... 33 6.5 tr|Q2FGZ8|Q2FGZ8_STAA3 Putative uncharacterized protein OS=Staph... 33 6.5 tr|A8Z420|A8Z420_STAAT Putative uncharacterized protein OS=Staph... 33 6.5 tr|A7X2D2|A7X2D2_STAA1 Putative uncharacterized protein OS=Staph... 33 6.5 tr|A6U1R1|A6U1R1_STAA2 Dynamin family protein OS=Staphylococcus ... 33 6.5 tr|A6QGZ1|A6QGZ1_STAAE Putative uncharacterized protein OS=Staph... 33 6.5
>tr|Q91847|Q91847_XENLA Secretogranin III OS=Xenopus laevis PE=2 SV=1 Length = 457
Score = 39.7 bits (91), Expect = 0.090 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 4/131 (3%) Frame = +3
Query: 3 KTTEKKGTVTIIGEGTVFSEKALPPQAKYVVNK----HQMQRKYHPTEANFQDEQDDDEP 170 K K GT+T EG + E A V NK R P+E DE D + Sbjct: 304 KMMVKYGTITP-EEGVNYLENLDDMIAVQVKNKLGKNFGSHRNALPSEDKNADESDSTKE 362
Query: 171 THAKPAPQIKLMSDFFKPSGTMTVQADDEMNADECLEAAKNNLQLFKETSGEADLQQTIL 350 AK + +L+ D KP ++ + A+ LEA + N++ KE + EA+ L Sbjct: 363 EAAKMEKEYELLKDSTKPEPNDAAESKPKGKAETYLEAIRKNIEWLKEHNKEANKGDNDL 422
Query: 351 ENCRKIRNHLA 383 ++ N A Sbjct: 423 SKLKQFVNQQA 433
>tr|Q6GLW5|Q6GLW5_XENLA Scg3-A protein OS=Xenopus laevis GN=scg3 PE=2 SV=1 Length = 458
Score = 39.7 bits (91), Expect = 0.090 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 4/131 (3%) Frame = +3
Query: 3 KTTEKKGTVTIIGEGTVFSEKALPPQAKYVVNK----HQMQRKYHPTEANFQDEQDDDEP 170 K K GT+T EG + E A V NK R P+E DE D + Sbjct: 305 KMMVKYGTITP-EEGVNYLENLDDMIAVQVKNKLGKNFGSHRNALPSEDKNADESDSTKE 363
Query: 171 THAKPAPQIKLMSDFFKPSGTMTVQADDEMNADECLEAAKNNLQLFKETSGEADLQQTIL 350 AK + +L+ D KP ++ + A+ LEA + N++ KE + EA+ L Sbjct: 364 EAAKMEKEYELLKDSTKPEPNDAAESKPKGKAETYLEAIRKNIEWLKEHNKEANKGDNDL 423
Query: 351 ENCRKIRNHLA 383 ++ N A Sbjct: 424 SKLKEFVNQQA 434
>tr|Q6CT84|Q6CT84_KLULA KLLA0C14630p OS=Kluyveromyces lactis GN=KLLA0C14630g PE=4 SV=1 Length = 620
Score = 38.1 bits (87), Expect = 0.26 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Frame = +3
Query: 141 FQDEQDDDEPTHAKPAPQI-KLMSDFFKPSGTMTVQADDEMNADECLEAAKNNLQLFKET 317 F D+ D T K +P++ + ++ + + + MN D+ L ++ +F+E Sbjct: 455 FMDKSTLDLTTLTKISPEVTRSINQRLMKAVKINAKQSKHMNTDQMLGTTISSTSMFQEA 514
Query: 318 SGEA--DLQQTILENCRKIRNHLARFIEEF 401 S E+ L +ILE+CR + N F++ F Sbjct: 515 SKESTSQLPPSILESCRMLNNSCCEFLKHF 544
>tr|Q16ES1|Q16ES1_AEDAE Transcription factor IIIA, putative OS=Aedes aegypti GN=AAEL015045 PE=4 SV=1 Length = 402
Score = 37.7 bits (86), Expect = 0.34 Identities = 24/80 (30%), Positives = 36/80 (45%) Frame = +3
Query: 126 PTEANFQDEQDDDEPTHAKPAPQIKLMSDFFKPSGTMTVQADDEMNADECLEAAKNNLQL 305 P ++ F E++DDEP + AP+ K M K S +Q N D+C E ++ L + Sbjct: 8 PVKSEFLSEEEDDEP---EAAPKRKRMKRGSKKSTQKAIQ----YNCDQCPEVFQDQLLM 60
Query: 306 FKETSGEADLQQTILENCRK 365 G A L E C + Sbjct: 61 VAHRRGHAGLTPFYCETCER 80
>tr|B7GCG8|B7GCG8_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_49969 PE=4 SV=1 Length = 384
Score = 37.4 bits (85), Expect = 0.45 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 9/109 (8%) Frame = +3
Query: 57 SEKALPPQAKYVVNKHQMQ-RKYHPTEANFQDEQDD--------DEPTHAKPAPQIKLMS 209 SEK P YV NK Q + Y +A F+DE + +P AKPA + S Sbjct: 101 SEKTHPQDRIYVWNKAPGQYQMYWMQDATFEDEDETILKVNQYLADPHSAKPASETATDS 160
Query: 210 DFFKPSGTMTVQADDEMNADECLEAAKNNLQLFKETSGEADLQQTILEN 356 + S + + DD + ADE NN +S + D TILEN Sbjct: 161 EGASHSNRL-MGMDDTIAADESHLRRINNDNNNNTSSSQVDALSTILEN 208
>tr|B3NJR3|B3NJR3_DROER GG22045 OS=Drosophila erecta GN=GG22045 PE=4 SV=1 Length = 1503
Score = 36.6 bits (83), Expect = 0.77 Identities = 26/89 (29%), Positives = 44/89 (49%) Frame = +3
Query: 54 FSEKALPPQAKYVVNKHQMQRKYHPTEANFQDEQDDDEPTHAKPAPQIKLMSDFFKPSGT 233 F+ KA PP+ K + P + F D+ D + KP+ Q K++S+ K +G Sbjct: 494 FTPKAKPPEQKLLSK---------PKPSLFDDDDLDIDDIFTKPSAQPKMLSE--KVAGK 542
Query: 234 MTVQADDEMNADECLEAAKNNLQLFKETS 320 ++ DD+ + L A+K ++ KETS Sbjct: 543 TSLFEDDDQDDVTDLFASKKTKEIQKETS 571
>tr|A3I0J7|A3I0J7_9SPHI ABC transporter, ATP-binding protein OS=Algoriphagus sp. PR1 GN=ALPR1_15229 PE=3 SV=1 Length = 640
Score = 36.2 bits (82), Expect = 1.00 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 13/93 (13%) Frame = +3
Query: 162 DEPTHAKPAPQIKLMSDFFKP-SGTMTVQADDEMNADECL----EAAKNNLQLF------ 308 DEPT+ P I+ + ++ K G + V + D+ D C+ E A L L+ Sbjct: 183 DEPTNHLDLPSIQWVENYLKTYEGAVVVVSHDQTFLDNCISSTVEVANQTLTLYSGNYSF 242
Query: 309 --KETSGEADLQQTILENCRKIRNHLARFIEEF 401 +E ++QQ EN +++ +FIE F Sbjct: 243 YKEEKKERMEIQQNAYENQQQMIKQTEKFIERF 275
>tr|B0P2M2|B0P2M2_9CLOT Putative uncharacterized protein OS=Clostridium sp. SS2/1 GN=CLOSS21_02157 PE=4 SV=1 Length = 506
Score = 35.0 bits (79), Expect = 2.2 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 7/122 (5%) Frame = -3
Query: 377 VVSNFSTIFENRLL*VGLSRSFFEKLEVIFCSLQTLISIHFIISLYSHCTTRFEK--IRH 204 +V TIF + L GLS KL ++ + +I F +S+YS +EK R Sbjct: 101 IVGGIITIFVDSLFAKGLSVEEINKLRILMIIMSVSTAISFPLSVYSSVLISYEKYIFRR 160
Query: 203 KFDLRGRFSMSGFVIILLVLKVG-----FCWVILSLHLMFIYNVFCLRRKSFLRKNSTLT 39 D+ + +++L + G V++ + ++Y +C R+ K L Sbjct: 161 ILDITSTVMLPILNLVVLFMGEGSIGMAAVGVVIQIIYGYVYIYYCKRKIGVKAKYDKLN 220
Query: 38 ND 33 D Sbjct: 221 YD 222
>tr|Q16H54|Q16H54_AEDAE Transcription factor IIIA, putative OS=Aedes aegypti GN=AAEL014150 PE=4 SV=1 Length = 402
Score = 34.7 bits (78), Expect = 2.9 Identities = 23/80 (28%), Positives = 35/80 (43%) Frame = +3
Query: 126 PTEANFQDEQDDDEPTHAKPAPQIKLMSDFFKPSGTMTVQADDEMNADECLEAAKNNLQL 305 P ++ F E++DDEP AP+ K M K S +Q + D+C E ++ L + Sbjct: 8 PVKSEFLSEEEDDEPG---TAPKRKRMKRGSKKSTQKAIQ----YSCDQCPEVFQDQLLM 60
Query: 306 FKETSGEADLQQTILENCRK 365 G A L E C + Sbjct: 61 VAHRRGHAGLTPFYCETCER 80
>tr|B6LR51|B6LR51_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_114148 PE=4 SV=1 Length = 829
Score = 34.7 bits (78), Expect = 2.9 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +3
Query: 321 GEADLQQTILENCRKIRNHLARFIEEFAESEDSRLATAMD 440 G+ D + ENC+ ++ A F+ E+ SED RL+ + + Sbjct: 336 GDLDAAAEVTENCQSLQGDFAMFLREYVRSEDRRLSPSTE 375
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