DK954403 |
Clone id |
TST39A01NGRL0020_F14 |
Library |
TST39 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_F14. 5' end sequence. |
Accession |
DK954403 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TTCGAGATCGCCATCCTCTGCATTCGATCTTGTTTAGCTTCTCAGCAGGACCGTTTGAAT TGGTGTCATAAGGCGTTTGCTATCGAAATCCTTGACACTGGGGATGCCATATGTTGCACG GAGGGTTCTTTGATGGATTATTCTGGTGTTTGAGGGAGAAGAGGCAGCACGCATTGCAAA TTTATCAAGTCTGAAGGCAGGATAAGAAAAGGATGTCCCTCGCAGAGCTGAGAGAGAGGG CGTTCCAGGCAAGCCTGCAGGTGAAGGAGTTGAAGGAGCAAGTACTGATGAGGCGCGCAC AGCTCATTGACTCTGATGTGGCTTCTTTTGCGCAGCAAAATGACTTTTCGACTACACAAC TGCAACCACATGATTTTGTTTGCTGCAGAACTCTCCAAGGACATACAGGCAAAGTGTATG CACTGGATTGGTCGCAAGAAAGGGATCGAATTGTAAGTGCTTCACAGGACGGACATTTAA TTGTCTGGAATCCATTGACAAGTCAAAAGACACATGCCATAAAACTAGCTTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P93563 |
Definition |
sp|P93563|GBB_SOLTU Guanine nucleotide-binding protein subunit beta OS=Solanum tuberosum |
Align length |
105 |
Score (bit) |
132.0 |
E-value |
1.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LPY7 |
Definition |
tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
105 |
Score (bit) |
133.0 |
E-value |
5.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954403|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_F14, 5' (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea... 133 5e-30 tr|Q9SW94|Q9SW94_PEA G protein beta subunit OS=Pisum sativum PE=... 130 3e-29 tr|A7P922|A7P922_VITVI Chromosome chr3 scaffold_8, whole genome ... 130 3e-29 tr|Q945H7|Q945H7_SOLTU G protein beta subunit 2 OS=Solanum tuber... 130 6e-29 tr|Q8LJQ7|Q8LJQ7_PEA G protein beta subunit OS=Pisum sativum PE=... 130 6e-29 tr|Q9FV61|Q9FV61_TOBAC Heterotrimeric GTP-binding protein subuni... 129 1e-28 tr|Q5PNT1|Q5PNT1_ARATH At4g34460 OS=Arabidopsis thaliana PE=2 SV=1 127 3e-28 tr|Q3E9R4|Q3E9R4_ARATH Uncharacterized protein At4g34460.3 OS=Ar... 127 3e-28 tr|Q9XFK0|Q9XFK0_PEA G protein beta subunit OS=Pisum sativum PE=... 125 1e-27 tr|A8MR96|A8MR96_ARATH Uncharacterized protein At4g34460.4 OS=Ar... 124 2e-27 tr|B4FVH4|B4FVH4_MAIZE Putative uncharacterized protein OS=Zea m... 122 9e-27 tr|Q8LNY6|Q8LNY6_WHEAT G protein beta subunit OS=Triticum aestiv... 122 1e-26 tr|Q10FF8|Q10FF8_ORYSJ cDNA, clone: J090061B07, full insert sequ... 122 2e-26 tr|B8AP31|B8AP31_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|O64944|O64944_AVEFA G protein beta subunit OS=Avena fatua GN=... 120 4e-26 tr|A5AL96|A5AL96_VITVI Putative uncharacterized protein OS=Vitis... 113 5e-24 tr|Q8GU43|Q8GU43_PHYPA Putative heterotrimeric G protein beta su... 96 2e-18 tr|A9RGA8|A9RGA8_PHYPA GPB1 heterotrimeric G protein beta subuni... 96 2e-18 tr|Q9HFS3|Q9HFS3_PNECA Guanine nucleotide-binding protein beta s... 77 4e-13 tr|Q8TFC0|Q8TFC0_SPOSC G-protein beta subunit OS=Sporothrix sche... 75 2e-12 tr|Q8NK86|Q8NK86_MAGGR Heterotrimeric G-protein beta subunit OS=... 75 3e-12 tr|Q6Y2F1|Q6Y2F1_TRIAT Heterotrimeric G protein beta subunit TGB... 75 3e-12 tr|A4QT24|A4QT24_MAGGR Guanine nucleotide-binding protein beta s... 75 3e-12 tr|Q96VA6|Q96VA6_FUSOX Guanine nucleotide-binding protein beta s... 74 5e-12 tr|Q6XPX0|Q6XPX0_FUSOX G protein beta subunit OS=Fusarium oxyspo... 74 5e-12 tr|Q1PBD2|Q1PBD2_GIBMO Heterotrimeric G protein beta subunit OS=... 74 5e-12 tr|Q1JUK2|Q1JUK2_GIBSA G-protein beta-subunit OS=Gibberella sacc... 74 5e-12 tr|Q8J258|Q8J258_USTMA G-protein beta subunit Bpp1 (Putative unc... 74 6e-12 tr|B6HKG3|B6HKG3_PENCH Pc21g07370 protein OS=Penicillium chrysog... 73 8e-12 tr|Q4WVI4|Q4WVI4_ASPFU G protein complex beta subunit SfaD OS=As... 73 1e-11
>tr|B8LPY7|B8LPY7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 377
Score = 133 bits (335), Expect = 5e-30 Identities = 65/105 (61%), Positives = 81/105 (77%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+AELRER A+ +V L+E++ +R QL+D+DVA++A N + D VCCRT Sbjct: 1 MSVAELRERHVAATAKVNALRERIKDKRRQLLDTDVATYASNNGRTPISFSFTDLVCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q9SW94|Q9SW94_PEA G protein beta subunit OS=Pisum sativum PE=2 SV=1 Length = 377
Score = 130 bits (328), Expect = 3e-29 Identities = 62/105 (59%), Positives = 79/105 (75%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+AEL+ER A+ V L+E++ RR L+D+D+A +A+ + P D +CCRT Sbjct: 1 MSVAELKERHIAATETVNNLRERLKQRRLSLLDTDIAGYARSQGRAPVTFGPTDILCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|A7P922|A7P922_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036395001 PE=4 SV=1 Length = 388
Score = 130 bits (328), Expect = 3e-29 Identities = 64/105 (60%), Positives = 79/105 (75%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+AEL+ER A+ V L+E++ +R L+D+DVA +A+ S P D VCCRT Sbjct: 1 MSVAELKERHMAATETVNSLRERLKQKRLLLLDTDVAGYARAQGKSPVTFGPTDLVCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTTEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q945H7|Q945H7_SOLTU G protein beta subunit 2 OS=Solanum tuberosum GN=GB2 PE=2 SV=1 Length = 377
Score = 130 bits (326), Expect = 6e-29 Identities = 62/105 (59%), Positives = 80/105 (76%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+AEL+ER A+ V +L+E++ +R QL+D+DV+ +A+ + P D VCCR Sbjct: 1 MSVAELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYAKTQGKTPVTFGPTDLVCCRI 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q8LJQ7|Q8LJQ7_PEA G protein beta subunit OS=Pisum sativum PE=4 SV=1 Length = 377
Score = 130 bits (326), Expect = 6e-29 Identities = 61/105 (58%), Positives = 80/105 (76%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+A+++ER A+ V L+E++ RR L+D+D+A +A+ + L P D +CCRT Sbjct: 1 MSVADVKERHIAATETVNNLRERLKQRRLSLLDTDIAGYARSQGRAPVTLGPTDILCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q9FV61|Q9FV61_TOBAC Heterotrimeric GTP-binding protein subunit beta 1 OS=Nicotiana tabacum PE=2 SV=1 Length = 377
Score = 129 bits (323), Expect = 1e-28 Identities = 61/105 (58%), Positives = 79/105 (75%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+ EL+ER A+ V +L+E++ +R QL+D+DV+ +A+ + P D VCCR Sbjct: 1 MSVTELKERHMAATQTVNDLREKLKQKRLQLLDTDVSGYARSQGKTPVTFGPTDLVCCRI 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTPEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q5PNT1|Q5PNT1_ARATH At4g34460 OS=Arabidopsis thaliana PE=2 SV=1 Length = 375
Score = 127 bits (320), Expect = 3e-28 Identities = 63/105 (60%), Positives = 78/105 (74%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS++EL+ER A+ V L++Q+ RR QL+D+DVA ++ + D VCCRT Sbjct: 1 MSVSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ ER+RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q3E9R4|Q3E9R4_ARATH Uncharacterized protein At4g34460.3 OS=Arabidopsis thaliana GN=At4g34460 PE=4 SV=1 Length = 347
Score = 127 bits (320), Expect = 3e-28 Identities = 63/105 (60%), Positives = 78/105 (74%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS++EL+ER A+ V L++Q+ RR QL+D+DVA ++ + D VCCRT Sbjct: 1 MSVSELKERHAVATETVNNLRDQLRQRRLQLLDTDVARYSAAQGRTRVSFGATDLVCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ ER+RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|Q9XFK0|Q9XFK0_PEA G protein beta subunit OS=Pisum sativum PE=2 SV=1 Length = 377
Score = 125 bits (314), Expect = 1e-27 Identities = 59/105 (56%), Positives = 78/105 (74%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS+A+++ER A+ V L+E++ R L+D+D+A +A+ + P D +CCRT Sbjct: 1 MSVADVKERHIAATETVNNLRERLSRDRLSLLDTDIAGYARSQGRAPVTFGPTDILCCRT 60
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ E++RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 61 LQGHTGKVYSLDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKL 105
>tr|A8MR96|A8MR96_ARATH Uncharacterized protein At4g34460.4 OS=Arabidopsis thaliana GN=At4g34460 PE=4 SV=1 Length = 372
Score = 124 bits (312), Expect = 2e-27 Identities = 64/105 (60%), Positives = 77/105 (73%) Frame = +3
Query: 213 MSLAELRERAFQASLQVKELKEQVLMRRAQLIDSDVASFAQQNDFSTTQLQPHDFVCCRT 392 MS++EL+ER A+ V L++Q+ RR QL+D+D A + F T D VCCRT Sbjct: 1 MSVSELKERHAVATETVNNLRDQLRQRRLQLLDTDAAQGRTRVSFGAT-----DLVCCRT 55
Query: 393 LQGHTGKVYALDWSQERDRIVSASQDGHLIVWNPLTSQKTHAIKL 527 LQGHTGKVY+LDW+ ER+RIVSASQDG LIVWN LTSQKTHAIKL Sbjct: 56 LQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKL 100
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