DK954325 |
Clone id |
TST39A01NGRL0020_C08 |
Library |
TST39 |
Length |
696 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0020_C08. 5' end sequence. |
Accession |
DK954325 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3110Contig1 |
Sequence |
CTCCTTTCTCGCAAGCTGCAAACAGGATTGAGGTATGTGCAGGTGGGAAGTGCAAGAAAG CAGGATCAGAGCAGCTCCTCTTAGCATTAGGTGTGCATATTCCTAGCTCTTCGAATGTGG TGGCTGTGCCTTGTAAGTGCATGGGAAAATGTTCTATGGCAATGAATGTGAAGGTCCACA AGGAGGATACAAATCCTCAGCATCATAGCCATGTGAGGGTGGAGGATGCCAATCTAATTC TGAATCACCACTTCGGATTGGGCCGATCTCCGACAGGGTTGCCTGCTTTACCACCACAAG ACGGGATGAGGGTGCCGCTCACAATGGGTGCTTAGGCCTGTTGAGTGCATATGACTGCAT TTTTTTGCAGAATGCAGGAGCGGGCTGTACTGGCTCTTCCATTTCCCTAGTAGATCTGCC ATATGGAAGATGGGTACCATGGGCTGGTTTGGATATATTCTCTGACATATTACCATAGTT CCAGAATTGCTTGTTGTATAAATTATACACTTATTGCTATTGGGAGGAGGAACCTTGTAT AAAACTTGTCATGGACTCTCATATCCCAAGTTAGTGTTGTGACGTAGTTGGCTAACGATG CTCATAGAAATTTGTAAACCTAACAAAGCAATTTTATTCAAAATGTATTGGGTTTGACCT CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6DJQ6 |
Definition |
sp|Q6DJQ6|ZIC3_XENTR Zinc finger protein ZIC 3 OS=Xenopus tropicalis |
Align length |
94 |
Score (bit) |
33.9 |
E-value |
0.79 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SCI6 |
Definition |
tr|A9SCI6|A9SCI6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
94 |
Score (bit) |
93.6 |
E-value |
1.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954325|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0020_C08, 5' (661 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SCI6|A9SCI6_PHYPA Predicted protein OS=Physcomitrella paten... 94 1e-17 tr|A9S4X0|A9S4X0_PHYPA Predicted protein OS=Physcomitrella paten... 91 5e-17 tr|B8LMT1|B8LMT1_PICSI Putative uncharacterized protein OS=Picea... 74 6e-12 tr|A9NRE5|A9NRE5_PICSI Putative uncharacterized protein OS=Picea... 69 3e-10 tr|A8IMA8|A8IMA8_CHLRE Predicted protein OS=Chlamydomonas reinha... 66 2e-09 tr|A7NW02|A7NW02_VITVI Chromosome chr5 scaffold_2, whole genome ... 60 2e-07 tr|A2Y067|A2Y067_ORYSI Putative uncharacterized protein OS=Oryza... 58 6e-07 tr|A5BHT3|A5BHT3_VITVI Putative uncharacterized protein OS=Vitis... 57 8e-07 tr|Q75L36|Q75L36_ORYSJ Os05g0137300 protein OS=Oryza sativa subs... 57 1e-06 tr|B7FN71|B7FN71_MEDTR Putative uncharacterized protein OS=Medic... 54 7e-06 tr|A8VTA4|A8VTA4_ARAHY Diacylglycerol acyltransferase OS=Arachis... 52 2e-05 tr|Q9SX63|Q9SX63_ARATH F11A17.15 protein OS=Arabidopsis thaliana... 52 3e-05 tr|Q9C5W0|Q9C5W0_ARATH Putative uncharacterized protein At1g4830... 52 3e-05 tr|Q84MB9|Q84MB9_ARATH At1g48300 OS=Arabidopsis thaliana PE=2 SV=1 52 3e-05 tr|Q0WTD3|Q0WTD3_ARATH Putative uncharacterized protein At1g4830... 52 3e-05 tr|Q2KP14|Q2KP14_ARAHY Soluble diacylglycerol acyltransferase OS... 50 9e-05 tr|Q39WM4|Q39WM4_GEOMG Respiratory-chain NADH dehydrogenase doma... 45 0.004 tr|A3IQL7|A3IQL7_9CHRO Putative uncharacterized protein OS=Cyano... 44 0.012 tr|B0CDB1|B0CDB1_ACAM1 Putative uncharacterized protein OS=Acary... 42 0.044 tr|B1WPA1|B1WPA1_CYAA5 Putative uncharacterized protein OS=Cyano... 41 0.057 tr|Q749M1|Q749M1_GEOSL NAD-reducing hydrogenase, alpha subunit O... 41 0.075 tr|A9KKG0|A9KKG0_CLOPH NADH dehydrogenase (Quinone) OS=Clostridi... 40 0.097 tr|A6LM73|A6LM73_THEM4 NADH dehydrogenase (Quinone) OS=Thermosip... 40 0.13 tr|Q00XE9|Q00XE9_OSTTA Chromosome 13 contig 1, DNA sequence. (Fr... 40 0.17 tr|B0S2I3|B0S2I3_FINM2 NADP-reducing hydrogenase OS=Finegoldia m... 39 0.22 tr|A6GL10|A6GL10_9BURK NADH dehydrogenase (Quinone) OS=Limnobact... 39 0.28 tr|B0JSG2|B0JSG2_MICAN 2Fe-2S ferredoxin OS=Microcystis aerugino... 38 0.48 tr|B7IDB8|B7IDB8_9THEM NADP-reducing hydrogenase, subunit c OS=T... 38 0.48 tr|A8YLE7|A8YLE7_MICAE Similar to tr|A0YXT0|A0YXT0_9CYAN Hypothe... 38 0.48 tr|B7K7V5|B7K7V5_9CHRO 2Fe-2S ferredoxin OS=Cyanothece sp. PCC 7... 38 0.63
>tr|A9SCI6|A9SCI6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_77522 PE=4 SV=1 Length = 619
Score = 93.6 bits (231), Expect = 1e-17 Identities = 43/94 (45%), Positives = 58/94 (61%) Frame = +3
Query: 9 SQAANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKED 188 + +IEVC GKC+K GS+Q+L +L +P SSN+ CKCMGKC A NV+V + Sbjct: 514 ANTGGKIEVCTVGKCRKGGSQQILASLKSIVPESSNISVTSCKCMGKCKSAPNVRVKNSE 573
Query: 189 TNPQHHSHVRVEDANLILNHHFGLGRSPTGLPAL 290 HSHV +DA+ + ++HFGL S LPAL Sbjct: 574 RQSHLHSHVSEDDADTLFDYHFGLQPSGNRLPAL 607
>tr|A9S4X0|A9S4X0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162874 PE=4 SV=1 Length = 629
Score = 91.3 bits (225), Expect = 5e-17 Identities = 43/91 (47%), Positives = 56/91 (61%) Frame = +3
Query: 18 ANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKEDTNP 197 + +IEVC GKC++ GS+++L A IP SSN+ A CKCMGKC A NV+V D Sbjct: 531 SGKIEVCTVGKCRRGGSQEILAAFQESIPESSNLSATSCKCMGKCKSAPNVRVKNSDGIS 590
Query: 198 QHHSHVRVEDANLILNHHFGLGRSPTGLPAL 290 Q HSHV ED + +L HFG+ S +P L Sbjct: 591 QLHSHVSAEDVDTLLELHFGMQPSGNPMPVL 621
>tr|B8LMT1|B8LMT1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 353
Score = 74.3 bits (181), Expect = 6e-12 Identities = 44/94 (46%), Positives = 53/94 (56%), Gaps = 8/94 (8%) Frame = +3
Query: 3 PFSQAANRIEVCAGGKCKKAGSEQLLLALGVHIPS---SSNVVAVPCKCMGKCSMAMNVK 173 P +A + I+VC GGKCKK+GSE LL AL I V AV CKCMGKC A NV+ Sbjct: 251 PLQEANSVIKVCMGGKCKKSGSEMLLEALEERISKLGLGCEVEAVGCKCMGKCRNAPNVR 310
Query: 174 VHKEDT-----NPQHHSHVRVEDANLILNHHFGL 260 V E+ + H V + D +LIL HFGL Sbjct: 311 VQTEEDGFHGGKGEVHMGVDIGDVDLILAQHFGL 344
>tr|A9NRE5|A9NRE5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 339
Score = 68.6 bits (166), Expect = 3e-10 Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 5/91 (5%) Frame = +3
Query: 3 PFSQAANRIEVCAGGKCKKAGSEQLLLALGVHIPSSS---NVVAVPCKCMGKCSMAMNVK 173 P + + I+VC GKCKK+GSE LL A I S +V AV CKCMGKC A +V+ Sbjct: 234 PVQEVNSVIKVCMSGKCKKSGSEMLLGAFEERINKSGIGFDVEAVGCKCMGKCRNAPSVR 293
Query: 174 VHKEDT--NPQHHSHVRVEDANLILNHHFGL 260 V E+ H V + D +LIL HFGL Sbjct: 294 VQTEEDVGKGVMHMGVNIGDIDLILAQHFGL 324
>tr|A8IMA8|A8IMA8_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_188807 PE=4 SV=1 Length = 346
Score = 65.9 bits (159), Expect = 2e-09 Identities = 30/94 (31%), Positives = 49/94 (52%) Frame = +3
Query: 6 FSQAANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKE 185 F A R+ VC G KC++ G++Q+L A+ ++N+ VPCKC+GKCS ++V + Sbjct: 217 FEGAPGRVMVCTGSKCQRKGAQQVLEAVSALADGNTNIEVVPCKCVGKCSAGAALRVRPQ 276
Query: 186 DTNPQHHSHVRVEDANLILNHHFGLGRSPTGLPA 287 ++ VR + HFG + G P+ Sbjct: 277 GQACATYTQVRPAQLRDMFEEHFGAVAAAAGAPS 310
>tr|A7NW02|A7NW02_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019731001 PE=4 SV=1 Length = 192
Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Frame = +3
Query: 18 ANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKEDTNP 197 A RIEVC GGKCKK+G+E LL + VV CKCMGKC + NV+V Sbjct: 93 AKRIEVCMGGKCKKSGAEALLEEFERVVGVEGAVVG--CKCMGKCRVGPNVRVLNSIEGG 150
Query: 198 QHHS----------HVRVEDANLILNHHFGLGRSPTGLPA 287 S V ++D +I+++ FG GLPA Sbjct: 151 MDDSVRTPANPLCVGVGLQDVGIIVSNFFGETHEDIGLPA 190
>tr|A2Y067|A2Y067_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18375 PE=4 SV=1 Length = 416
Score = 57.8 bits (138), Expect = 6e-07 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Frame = +3
Query: 21 NRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKEDTNPQ 200 NRIEVC GGKCKK+GS +L + + VV CKC+GKC + NV++ E + Sbjct: 320 NRIEVCMGGKCKKSGSLAVLQEFEKKVGTDGAVVG--CKCLGKCGLGPNVRLRSEGAAQK 377
Query: 201 HHSHVRV--EDANLILNHHFGLG 263 + + V ED I + FG G Sbjct: 378 NPLFIGVVLEDVGTIASGLFGGG 400
>tr|A5BHT3|A5BHT3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020818 PE=4 SV=1 Length = 362
Score = 57.4 bits (137), Expect = 8e-07 Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 14/104 (13%) Frame = +3
Query: 18 ANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKEDTNP 197 A RIEVC GGKCKK+G+E LL + VV CKCMGKC + NV+V Sbjct: 259 AKRIEVCMGGKCKKSGAEALLEEFERVVGVEGAVVG--CKCMGKCRVGPNVRVLNSIEGV 316
Query: 198 QHHS--------------HVRVEDANLILNHHFGLGRSPTGLPA 287 + V ++D +I+++ FG GLPA Sbjct: 317 EAEGMDDSVRTPANPLCVGVGLQDVGIIVSNFFGETHEDIGLPA 360
>tr|Q75L36|Q75L36_ORYSJ Os05g0137300 protein OS=Oryza sativa subsp. japonica GN=OJ1127_B08.12 PE=2 SV=1 Length = 409
Score = 56.6 bits (135), Expect = 1e-06 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = +3
Query: 21 NRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKVHKEDTNPQ 200 NRIEVC GGKCKK+GS +L + + VV CKC+GKC + NV++ E + Sbjct: 320 NRIEVCMGGKCKKSGSLAVLQEFEKKVGTDGAVVG--CKCLGKCGLGPNVRLRSEGAAQK 377
Query: 201 HHS---HVRVEDANLILNHHFGLG 263 + V +ED I + FG G Sbjct: 378 KNPLFIGVVLEDVGTIASGLFGGG 401
>tr|B7FN71|B7FN71_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 341
Score = 54.3 bits (129), Expect = 7e-06 Identities = 26/54 (48%), Positives = 31/54 (57%) Frame = +3
Query: 15 AANRIEVCAGGKCKKAGSEQLLLALGVHIPSSSNVVAVPCKCMGKCSMAMNVKV 176 A RIEVC G KCKK+G+ LL + V V CKCMGKC A NV++ Sbjct: 233 AQKRIEVCMGNKCKKSGAAALLQEFEKVVGVEGEGVVVGCKCMGKCKTAPNVRI 286
|