DK954195 |
Clone id |
TST39A01NGRL0019_M20 |
Library |
TST39 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_M20. 5' end sequence. |
Accession |
DK954195 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGCACCCATCAATCAGCAGCTACGAGAACTGGAAAGAGGAGTTGACATCCTAGTCGCAAC TCCGGGTCGCTTATCTGATCTGTTAGAAAGGGCTCGAGTATCTCTTTCACAAGTGAGGTA TTTAGCCCTGGATGAAGCTGATCGGATGCTTGATATGGGTTTCGAACCTCAAATCCGCAA GATAGTCGAGCAGATGGACATGCCTCCAGCAGGAGACAGGCAGACGATGCTATTTAGTGC GACGTTTCCAAGAGAAATACAGAGGCTTGCAGCTGATTTTCTATCAAGTTATATTTTCTT GGCTGTTGGACGAGTGGGGTCCAGTACTGACCTGATTGTACAGAAAGTTGAGTTTGTGCC TGATCATGACAAGCGAAGTATGTTGATGGACCTTATTCATGCTGCTCAGAATGAAAATGG TATTCAGCGAGTCCAAGGAAAGCAACCCTTGACACTGGTGTTTGTGGAAACCAAACGAGG TGCCGATTCTCTAGAGGATTGGTTGTGTCGTAATAATTTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84W89 |
Definition |
sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana |
Align length |
172 |
Score (bit) |
280.0 |
E-value |
2.0e-75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TJC5 |
Definition |
tr|A9TJC5|A9TJC5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
279.0 |
E-value |
7.0e-74 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954195|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_M20, 5' (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TJC5|A9TJC5_PHYPA Predicted protein (Fragment) OS=Physcomit... 279 7e-74 tr|A9S4S5|A9S4S5_PHYPA Predicted protein (Fragment) OS=Physcomit... 276 3e-73 tr|A7PW15|A7PW15_VITVI Chromosome chr8 scaffold_34, whole genome... 276 4e-73 tr|A9T4J8|A9T4J8_PHYPA Predicted protein OS=Physcomitrella paten... 276 6e-73 tr|A5B299|A5B299_VITVI Putative uncharacterized protein OS=Vitis... 272 6e-72 tr|A9T6F0|A9T6F0_PHYPA Predicted protein OS=Physcomitrella paten... 272 8e-72 tr|B8B879|B8B879_ORYSI Putative uncharacterized protein OS=Oryza... 268 1e-70 tr|A3BHK9|A3BHK9_ORYSJ Putative uncharacterized protein OS=Oryza... 268 1e-70 tr|A3CCT6|A3CCT6_ORYSJ Putative uncharacterized protein OS=Oryza... 267 3e-70 tr|A7P045|A7P045_VITVI Chromosome chr6 scaffold_3, whole genome ... 265 1e-69 tr|A3ANT4|A3ANT4_ORYSJ Putative uncharacterized protein OS=Oryza... 263 3e-69 tr|A7PF17|A7PF17_VITVI Chromosome chr11 scaffold_13, whole genom... 244 2e-63 tr|B7ZYK8|B7ZYK8_MAIZE Putative uncharacterized protein OS=Zea m... 223 3e-57 tr|A8IBY2|A8IBY2_CHLRE Predicted protein (Fragment) OS=Chlamydom... 222 1e-56 tr|B7EZD4|B7EZD4_ORYSJ cDNA clone:002-104-C03, full insert seque... 220 3e-56 tr|A3BDC2|A3BDC2_ORYSJ Putative uncharacterized protein OS=Oryza... 220 3e-56 tr|A2YER4|A2YER4_ORYSI Putative uncharacterized protein OS=Oryza... 220 3e-56 tr|A7QR83|A7QR83_VITVI Chromosome chr13 scaffold_149, whole geno... 220 4e-56 tr|B6QHG5|B6QHG5_PENMA ATP dependent RNA helicase (Dbp1), putati... 215 1e-54 tr|B8N9S2|B8N9S2_ASPFL ATP dependent RNA helicase (Dbp1), putati... 214 3e-54 tr|B8MK94|B8MK94_9EURO ATP dependent RNA helicase (Dbp1), putati... 213 3e-54 tr|Q01A55|Q01A55_OSTTA Putative DEAD-box RNA helicase DEAD3 (ISS... 212 1e-53 tr|B0S6P6|B0S6P6_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 ... 211 1e-53 tr|A2RV38|A2RV38_DANRE DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 ... 211 1e-53 tr|B0Y5V9|B0Y5V9_ASPFC ATP dependent RNA helicase (Dbp1), putati... 211 1e-53 tr|Q52ZA2|Q52ZA2_CARAU Putative DEAD-box family RNA helicase PL1... 211 2e-53 tr|B4F9Y2|B4F9Y2_MAIZE Putative uncharacterized protein OS=Zea m... 211 2e-53 tr|A4RWT1|A4RWT1_OSTLU Predicted protein OS=Ostreococcus lucimar... 211 2e-53 tr|A8NA58|A8NA58_COPC7 Putative uncharacterized protein OS=Copri... 210 4e-53 tr|B6HVF1|B6HVF1_PENCH Pc22g19070 protein OS=Penicillium chrysog... 209 5e-53
>tr|A9TJC5|A9TJC5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_1580 PE=4 SV=1 Length = 579
Score = 279 bits (713), Expect = 7e-74 Identities = 145/173 (83%), Positives = 155/173 (89%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 AP++ QLRE+ERGVDILVATPGRLSDLLERARVSLS VRYLALDEADRMLDMGFEPQIR+ Sbjct: 246 APVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADRMLDMGFEPQIRR 305
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPPAG+RQTMLFSATFPREIQRLA+DFLS+YIFLAVGRVGSSTDLIVQ+VEFV Sbjct: 306 IVEQMDMPPAGERQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVQ 365
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRSMLMDLIHA G+Q LTLVFVETK+GADSLEDWLCR F Sbjct: 366 DADKRSMLMDLIHA----QSALAPPGQQTLTLVFVETKKGADSLEDWLCRMGF 414
>tr|A9S4S5|A9S4S5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_21374 PE=4 SV=1 Length = 589
Score = 276 bits (707), Expect = 3e-73 Identities = 143/173 (82%), Positives = 155/173 (89%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 AP++ QLRE+ERGVDILVATPGRLSDLLERARVSLS VRYLALDEADRMLDMGFEPQIR+ Sbjct: 257 APVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADRMLDMGFEPQIRR 316
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPPAG+RQTMLFSATFPREIQRLA+DFLS+YIFLAVGRVGSST+LIVQ+VE+V Sbjct: 317 IVEQMDMPPAGERQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTELIVQRVEYVQ 376
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRSMLMDLIHA G+Q LTLVFVETK+GADSLEDWLCR F Sbjct: 377 DSDKRSMLMDLIHA----QSALAPPGQQSLTLVFVETKKGADSLEDWLCRMGF 425
>tr|A7PW15|A7PW15_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025435001 PE=4 SV=1 Length = 419
Score = 276 bits (706), Expect = 4e-73 Identities = 146/173 (84%), Positives = 153/173 (88%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 APINQQLRELERGVDILVATPGRL DLLERARVSL +RYLALDEADRMLDMGFEPQIRK Sbjct: 76 APINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 135
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G RQTMLFSATFP+EIQRLA+DFLSSYIFLAVGRVGSSTDLIVQ+VEFV Sbjct: 136 IVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVGSSTDLIVQRVEFVH 195
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 + DKRS LMDL+H AQ NG GKQ LTLVFVETK+GADSLE WLC N F Sbjct: 196 ESDKRSHLMDLLH-AQRANG---AHGKQSLTLVFVETKKGADSLEHWLCMNGF 244
>tr|A9T4J8|A9T4J8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_168022 PE=4 SV=1 Length = 600
Score = 276 bits (705), Expect = 6e-73 Identities = 143/173 (82%), Positives = 155/173 (89%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 AP++ QLRE+ERGVDILVATPGRLSDLLERARVSLS VRYLALDEADRMLDMGFEPQIR+ Sbjct: 261 APVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADRMLDMGFEPQIRR 320
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPPAG+RQTMLFSATFPREIQRLA+DFLS+YIFLAVGRVGSSTDLIVQ+VE+V Sbjct: 321 IVEQMDMPPAGERQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQ 380
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRSMLMDLIHA G+Q LTLVFVETK+GAD+LEDWLCR F Sbjct: 381 DVDKRSMLMDLIHA----QSALAPPGQQTLTLVFVETKKGADALEDWLCRLGF 429
>tr|A5B299|A5B299_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013679 PE=4 SV=1 Length = 612
Score = 272 bits (696), Expect = 6e-72 Identities = 143/173 (82%), Positives = 154/173 (89%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 API+QQLR+LERGVDILVATPGRL DLLERARVSL +RYLALDEADRMLDMGFEPQIRK Sbjct: 270 APISQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 329
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G RQTMLFSATFP+EIQ+LA+DFLS+Y+FLAVGRVGSSTDLIVQ+VEFV Sbjct: 330 IVEQMDMPPQGVRQTMLFSATFPKEIQKLASDFLSNYVFLAVGRVGSSTDLIVQRVEFVH 389
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRS LMDL+H AQ NG V GKQ LTLVFVETK+GADSLE WLC N F Sbjct: 390 DTDKRSHLMDLLH-AQRANG---VHGKQYLTLVFVETKKGADSLEHWLCMNGF 438
>tr|A9T6F0|A9T6F0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_107568 PE=4 SV=1 Length = 584
Score = 272 bits (695), Expect = 8e-72 Identities = 141/173 (81%), Positives = 153/173 (88%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 AP++ QLRELERGVDILVATPGRLSDLLERARVSLS VRYL LDEADRMLDMGFEPQIR+ Sbjct: 252 APVHNQLRELERGVDILVATPGRLSDLLERARVSLSMVRYLTLDEADRMLDMGFEPQIRR 311
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPPAG+RQTMLFSATFPREIQRLA+DFLS+YIFLAVGRVGSST+LIVQ+VE+V Sbjct: 312 IVEQMDMPPAGERQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTELIVQRVEYVQ 371
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRSMLMDLIHA G+ LTLVFVETK+GAD+LEDWLCR F Sbjct: 372 DADKRSMLMDLIHA----QSALAPPGQTSLTLVFVETKKGADALEDWLCRMGF 420
>tr|B8B879|B8B879_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25294 PE=4 SV=1 Length = 639
Score = 268 bits (685), Expect = 1e-70 Identities = 140/173 (80%), Positives = 152/173 (87%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 API QQLRELERGV+ILVATPGRL DLLERARVSL ++YLALDEADRMLDMGFEPQIRK Sbjct: 286 APITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRK 345
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G+RQTMLFSATFP+EIQR+A+DFL+ YIFLAVGRVGSSTDLIVQ+VEFV Sbjct: 346 IVEQMDMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVL 405
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRS LMDL+H AQ NG GKQ LTLVFVETKRGAD+LE+WL N F Sbjct: 406 DADKRSYLMDLLH-AQRANG---THGKQALTLVFVETKRGADALENWLYNNGF 454
>tr|A3BHK9|A3BHK9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022531 PE=4 SV=1 Length = 801
Score = 268 bits (685), Expect = 1e-70 Identities = 140/173 (80%), Positives = 152/173 (87%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 API QQLRELERGV+ILVATPGRL DLLERARVSL ++YLALDEADRMLDMGFEPQIRK Sbjct: 439 APITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRK 498
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G+RQTMLFSATFP+EIQR+A+DFL+ YIFLAVGRVGSSTDLIVQ+VEFV Sbjct: 499 IVEQMDMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVL 558
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRS LMDL+H AQ NG GKQ LTLVFVETKRGAD+LE+WL N F Sbjct: 559 DADKRSYLMDLLH-AQRANG---THGKQALTLVFVETKRGADALENWLYNNGF 607
>tr|A3CCT6|A3CCT6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033108 PE=4 SV=1 Length = 541
Score = 267 bits (682), Expect = 3e-70 Identities = 137/173 (79%), Positives = 150/173 (86%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 APINQQLR+LERGVDILVATPGRL DLLERARVSL +RYLALDEADRMLDMGFEPQ+R+ Sbjct: 191 APINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRR 250
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G RQTMLFSATFP+EIQR+A+DFL +YIFLAVGRVGSSTDLIVQ+VEFV Sbjct: 251 IVEQMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQ 310
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 + DKRS LMDL+HA ++ GK LTLVFVETKRGADSLE WLC N F Sbjct: 311 EADKRSHLMDLLHAQRD----SATPGKPTLTLVFVETKRGADSLEHWLCMNGF 359
>tr|A7P045|A7P045_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024762001 PE=4 SV=1 Length = 608
Score = 265 bits (677), Expect = 1e-69 Identities = 140/173 (80%), Positives = 151/173 (87%) Frame = +2
Query: 2 APINQQLRELERGVDILVATPGRLSDLLERARVSLSQVRYLALDEADRMLDMGFEPQIRK 181 API+QQLR+LERGVDILVATPGRL DLLERARVSL +RYLALDEADRMLDMGFEPQIRK Sbjct: 270 APISQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRK 329
Query: 182 IVEQMDMPPAGDRQTMLFSATFPREIQRLAADFLSSYIFLAVGRVGSSTDLIVQKVEFVP 361 IVEQMDMPP G RQTMLFSATFP+EIQ+LA+DFLS+Y+FLAVGRVGSSTDLIVQ+VEFV Sbjct: 330 IVEQMDMPPQGVRQTMLFSATFPKEIQKLASDFLSNYVFLAVGRVGSSTDLIVQRVEFVH 389
Query: 362 DHDKRSMLMDLIHAAQNENGIQRVQGKQPLTLVFVETKRGADSLEDWLCRNNF 520 D DKRS LMDL+H AQ NG Q LTLVFVETK+GADSLE WLC N F Sbjct: 390 DTDKRSHLMDLLH-AQRANG-------QYLTLVFVETKKGADSLEHWLCMNGF 434
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