DK954133 |
Clone id |
TST39A01NGRL0019_K02 |
Library |
TST39 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_K02. 5' end sequence. |
Accession |
DK954133 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL261Contig1 |
Sequence |
AAACCCATCGCCGAGTTCTGTGCAGTAACGACCGGGCTACTAAGAGAACAGAAAAGCAGG GCACATGCATGCCTCTGTGTGTGTGCCCTTCTGCGCAGCTTCGGGTAAAGCAAGTGTAGC AGGGTGTGAATGATGGCAGGTGTTGCTGAAGAGGAGGTTTGCCAGATAGAGTCCTTACAA GTGGAGGAGTATCCTTTTGGCTCTGGCTGGTTCTTTCCTCGTGAGCAGATTGAGCAGCGA TCCTTGTCTAGAAGGGATGGTATAAGCCTAGCGAAGGAGAACCAGCTCCGCAAGTCTTAT TGTGTCTTTCTGCAAGACCTTGGCATGCGCCTGAAAGTGCCTCAATTGACAATTGCGACG TCAATCGTGTTTTGCCATCGGTTCTATCTTCGGCAGTCACATGCAAAGAATGACCGCTAT ACGATTGCAACAGCTTGCATGTTCCTGGCTGGGAAGGTGGAGGAGACTCCAAAATTACTG CAGAATGTCCTCTCTCTTTCCTATGATATAAGACACAAAAGAGACAAAGTAGCTGCGGAG CGAATTAAACAGAAGGAGGTCTATGAGCACGAGAAGGAGCAAGTTTTGCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q2RAC5 |
Definition |
sp|Q2RAC5|CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp. japonica |
Align length |
131 |
Score (bit) |
201.0 |
E-value |
2.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BJ73 |
Definition |
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
131 |
Score (bit) |
201.0 |
E-value |
3.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954133|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_K02, 5' (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza... 201 3e-50 tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequen... 198 2e-49 tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medic... 192 2e-47 tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medic... 191 4e-47 tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whol... 190 5e-47 tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whol... 190 6e-47 tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza... 186 7e-46 tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza... 185 2e-45 tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella paten... 182 1e-44 tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 181 3e-44 tr|A9SUB1|A9SUB1_PHYPA Predicted protein OS=Physcomitrella paten... 181 4e-44 tr|A9SK15|A9SK15_PHYPA Predicted protein (Fragment) OS=Physcomit... 171 4e-41 tr|A9SUA9|A9SUA9_PHYPA Predicted protein (Fragment) OS=Physcomit... 160 4e-38 tr|B6SH69|B6SH69_MAIZE Cyclin-dependent protein kinase OS=Zea ma... 147 4e-34 tr|A7NT76|A7NT76_VITVI Chromosome chr18 scaffold_1, whole genome... 145 2e-33 tr|B8AH65|B8AH65_ORYSI Putative uncharacterized protein OS=Oryza... 144 5e-33 tr|B7F0D1|B7F0D1_ORYSJ cDNA clone:002-129-H05, full insert seque... 144 5e-33 tr|A3A6C4|A3A6C4_ORYSJ Putative uncharacterized protein OS=Oryza... 134 3e-30 tr|A7NWJ7|A7NWJ7_VITVI Chromosome chr5 scaffold_2, whole genome ... 122 1e-26 tr|Q6EEW1|Q6EEW1_MEDTR Cyclin T1 OS=Medicago truncatula PE=2 SV=1 122 2e-26 tr|A5ASI0|A5ASI0_VITVI Putative uncharacterized protein OS=Vitis... 122 2e-26 tr|A5B2H5|A5B2H5_VITVI Putative uncharacterized protein OS=Vitis... 117 5e-25 tr|B6UF70|B6UF70_MAIZE Putative uncharacterized protein OS=Zea m... 113 7e-24 tr|Q54LJ0|Q54LJ0_DICDI Cyclin OS=Dictyostelium discoideum GN=cyc... 102 2e-20 tr|B8AH26|B8AH26_ORYSI Putative uncharacterized protein OS=Oryza... 101 4e-20 tr|A5BF67|A5BF67_VITVI Putative uncharacterized protein OS=Vitis... 100 8e-20 tr|Q3V0G4|Q3V0G4_MOUSE Cyclin T1 (Fragment) OS=Mus musculus GN=C... 97 5e-19 tr|Q01EB0|Q01EB0_OSTTA CycK CycK-related cyclin family protein (... 97 5e-19 tr|Q866N0|Q866N0_TUPCH Cyclin T1 OS=Tupaia chinensis PE=2 SV=1 94 4e-18 tr|A5C1E3|A5C1E3_VITVI Putative uncharacterized protein OS=Vitis... 94 8e-18
>tr|B8BJ73|B8BJ73_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35185 PE=4 SV=1 Length = 490
Score = 201 bits (511), Expect = 3e-50 Identities = 95/131 (72%), Positives = 114/131 (87%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 379 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 558 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKE 153
Query: 559 VYEHEKEQVLL 591 VYE +KE +LL Sbjct: 154 VYEQQKELILL 164
>tr|B7EPW6|B7EPW6_ORYSJ cDNA clone:J013153K21, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 543
Score = 198 bits (504), Expect = 2e-49 Identities = 94/131 (71%), Positives = 113/131 (86%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 379 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 558 RFYLRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQKE Sbjct: 93 RFYLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAGQRIKQKE 152
Query: 559 VYEHEKEQVLL 591 VY+ +KE +LL Sbjct: 153 VYDQQKELILL 163
>tr|B7FL84|B7FL84_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 265
Score = 192 bits (487), Expect = 2e-47 Identities = 91/131 (69%), Positives = 111/131 (84%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 GS W+F R++IE+ S S+ DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GSRWYFSRKEIEENSPSQEDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 379 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 558 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIMVSYEIINKKDPTAVQRIKQKE 149
Query: 559 VYEHEKEQVLL 591 VYE +KE +LL Sbjct: 150 VYEQQKELILL 160
>tr|B7FLS8|B7FLS8_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 395
Score = 191 bits (484), Expect = 4e-47 Identities = 89/128 (69%), Positives = 110/128 (85%) Frame = +1
Query: 208 WFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHRFY 387 W+ R++IE+ + SR+DGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCHRF+ Sbjct: 34 WYMSRKEIEENAPSRKDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 93
Query: 388 LRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEVYE 567 LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY++ HK+D AA+RIKQKEVYE Sbjct: 94 LRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEMIHKKDPAAAQRIKQKEVYE 153
Query: 568 HEKEQVLL 591 +KE +LL Sbjct: 154 QQKELILL 161
>tr|A7QCS7|A7QCS7_VITVI Chromosome undetermined scaffold_79, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035533001 PE=3 SV=1 Length = 502
Score = 190 bits (483), Expect = 5e-47 Identities = 94/152 (61%), Positives = 117/152 (76%) Frame = +1
Query: 136 AGVAEEEVCQIESLQVEEYPFGSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQ 315 +G+ E+ C +EE G W+ R++IE+ S SRRDGI L KE RKSYC FLQ Sbjct: 12 SGIFEDGSCCNSKDGLEE---GGHWYMSRKEIEENSPSRRDGIDLRKETYFRKSYCTFLQ 68
Query: 316 DLGMRLKVPQLTIATSIVFCHRFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLS 495 DLGMRLKVPQ+TIAT+I+FCHRF+L QSHAKNDR TIAT CMFLAGKVEETP+ L++V+ Sbjct: 69 DLGMRLKVPQVTIATAIIFCHRFFLCQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIL 128
Query: 496 LSYDIRHKRDKVAAERIKQKEVYEHEKEQVLL 591 +SY+I HKRD A ++IKQKEVYE +KE +L+ Sbjct: 129 VSYEIIHKRDPAAVQKIKQKEVYEQQKELILI 160
>tr|A7QD89|A7QD89_VITVI Chromosome undetermined scaffold_80, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035737001 PE=3 SV=1 Length = 523
Score = 190 bits (482), Expect = 6e-47 Identities = 90/131 (68%), Positives = 110/131 (83%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 G W+ R++IE+ S S+RDGI L KE LRKSYC FLQDLGMRLKVPQ+TIAT+I+FCH Sbjct: 30 GGRWYLSRKEIEENSPSKRDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCH 89
Query: 379 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 558 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I +K+D A +RIKQKE Sbjct: 90 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILVSYEIINKKDPAAVQRIKQKE 149
Query: 559 VYEHEKEQVLL 591 VYE +KE +LL Sbjct: 150 VYEQQKELILL 160
>tr|A3C8T7|A3C8T7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031709 PE=3 SV=1 Length = 495
Score = 186 bits (473), Expect = 7e-46 Identities = 92/136 (67%), Positives = 111/136 (81%), Gaps = 5/136 (3%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 G+ W+F R++IE+ SLSRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 34 GASWYFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 93
Query: 379 RFYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKE 558 RF+LRQSHAKNDR TIAT CMFLAGKVEETP+ L++V+ +SY+I HK+D A +RIKQK Sbjct: 94 RFFLRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVILISYEIIHKKDAAAVQRIKQKS 153
Query: 559 -----VYEHEKEQVLL 591 V +KE +LL Sbjct: 154 LDYFGVEWQQKELILL 169
>tr|A3CHD6|A3CHD6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034708 PE=3 SV=1 Length = 683
Score = 185 bits (469), Expect = 2e-45 Identities = 94/159 (59%), Positives = 114/159 (71%), Gaps = 28/159 (17%) Frame = +1
Query: 199 GSGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCH 378 G+ W+F R++IE+ S SRRDGI L KE+ LRKSYC FLQDLGMRLKVPQ+TIAT+IVFCH Sbjct: 33 GASWYFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCH 92
Query: 379 RFYLRQSHAKNDR----------------------------YTIATACMFLAGKVEETPK 474 RFYLRQSHAKNDR +TIAT CMFLAGKVEETP+ Sbjct: 93 RFYLRQSHAKNDRRCQKLRAITRKRNEYKFLLPMERDSIVVHTIATVCMFLAGKVEETPR 152
Query: 475 LLQNVLSLSYDIRHKRDKVAAERIKQKEVYEHEKEQVLL 591 L++V+ +SY+I HK+D A +RIKQKEVY+ +KE +LL Sbjct: 153 PLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILL 191
>tr|A9SI06|A9SI06_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130165 PE=3 SV=1 Length = 210
Score = 182 bits (463), Expect = 1e-44 Identities = 85/129 (65%), Positives = 107/129 (82%) Frame = +1
Query: 202 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 381 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 34 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 93
Query: 382 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 561 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +AA+RI+QK+V Sbjct: 94 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAAQRIRQKDV 153
Query: 562 YEHEKEQVL 588 YE +KE VL Sbjct: 154 YEDQKELVL 162
>tr|A9TMA9|A9TMA9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42949 PE=3 SV=1 Length = 406
Score = 181 bits (459), Expect = 3e-44 Identities = 84/129 (65%), Positives = 106/129 (82%) Frame = +1
Query: 202 SGWFFPREQIEQRSLSRRDGISLAKENQLRKSYCVFLQDLGMRLKVPQLTIATSIVFCHR 381 + W+F R++IE++S SR DGI + KE RKSYC FLQDLGMRLKVPQ+TIAT+IVFCHR Sbjct: 1 ANWYFSRDEIEKQSPSRLDGIDIKKETYFRKSYCTFLQDLGMRLKVPQVTIATAIVFCHR 60
Query: 382 FYLRQSHAKNDRYTIATACMFLAGKVEETPKLLQNVLSLSYDIRHKRDKVAAERIKQKEV 561 F+ RQSH KNDR+ +AT CMFLAGKVEETP+ L+ V+ SY+IR K+D +A +RI+QK+V Sbjct: 61 FFHRQSHKKNDRHMVATICMFLAGKVEETPRPLREVIMFSYEIRFKKDPIAVQRIRQKDV 120
Query: 562 YEHEKEQVL 588 YE +KE VL Sbjct: 121 YEDQKELVL 129
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