DK953914 |
Clone id |
TST39A01NGRL0019_A18 |
Library |
TST39 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_A18. 5' end sequence. |
Accession |
DK953914 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATGTCGAGCAGGTGCATGCTGTTGCCCGTTACCTGCTTCGGACCGTCGCTACTGCATGCA TTGAGAAGACCTATGGAGACCTCTTCAGGTCCCCTGTGTCGGCCCTCGACGAAGCCAAGA AGGAGCTTATAGACTTCCTGCACACGCGTCCCCCTTCGCCTCCATCGGATCTCAATGCAA CTCATTCTCCTTCCGATCGTGCCAAGGCCCTCCTTGATCAATTTGTCCACTCCAAAACCA AGCTTCTTAGCAGAGTCTCCAGCAAGCTCGTCAGTGCGGACAAGAAGGAGGACAAAATTG AGGAGCTTGAGCAAGATCTGCAGCATAACGAGAAATGGATCTTTGGCCAAAGAGAACGTA TTGCCAAGGACTTTATCAAAGCTCTTGATAGTACACGAAGTTCTATCTGCGCTTTGAAGT TCAGCTCGCATGAAGAACTCGCAGAACACAAAAGCATTTGTCCTTTCAAGCCTATTACAT GCGAGAATCAAGGATGTGGCCATGTCCTTTCAGGATTGCATGGTGCTGAGCACGATGCAG TTTGTGGATATAAGCTTTTGCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q26261 |
Definition |
sp|Q26261|UNC5_CAEEL Netrin receptor unc-5 OS=Caenorhabditis elegans |
Align length |
70 |
Score (bit) |
35.8 |
E-value |
0.14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TZK8 |
Definition |
tr|A9TZK8|A9TZK8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
188 |
Score (bit) |
118.0 |
E-value |
2.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953914|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_A18, 5' (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TZK8|A9TZK8_PHYPA Predicted protein (Fragment) OS=Physcomit... 118 2e-25 tr|A7PW27|A7PW27_VITVI Chromosome chr8 scaffold_34, whole genome... 112 1e-23 tr|Q9SF04|Q9SF04_ARATH F26K24.24 protein (Putative uncharacteriz... 110 4e-23 tr|A9REQ2|A9REQ2_PHYPA Predicted protein OS=Physcomitrella paten... 106 9e-22 tr|Q6RZU6|Q6RZU6_MUSAC Putative uncharacterized protein H9-8 OS=... 99 2e-19 tr|Q7XX31|Q7XX31_ORYSJ Os04g0218900 protein OS=Oryza sativa subs... 96 9e-19 tr|A3B2E7|A3B2E7_ORYSJ cDNA, clone: J065161N15, full insert sequ... 96 9e-19 tr|A2Y2Z9|A2Y2Z9_ORYSI Putative uncharacterized protein OS=Oryza... 96 9e-19 tr|A3AR63|A3AR63_ORYSJ Putative uncharacterized protein OS=Oryza... 96 2e-18 tr|A2ZIP5|A2ZIP5_ORYSI Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|A2ZIP4|A2ZIP4_ORYSI Putative uncharacterized protein OS=Oryza... 94 4e-18 tr|B4FHD0|B4FHD0_MAIZE Putative uncharacterized protein OS=Zea m... 92 1e-17 tr|Q2QWV7|Q2QWV7_ORYSJ Os12g0181300 protein OS=Oryza sativa subs... 92 2e-17 tr|B6UAR7|B6UAR7_MAIZE Prenyltransferase/ zinc ion binding prote... 91 3e-17 tr|B4FLK6|B4FLK6_MAIZE Putative uncharacterized protein OS=Zea m... 91 3e-17 tr|A3AR70|A3AR70_ORYSJ Putative uncharacterized protein OS=Oryza... 91 3e-17 tr|A3CFI8|A3CFI8_ORYSJ Putative uncharacterized protein OS=Oryza... 90 7e-17 tr|B4FDD7|B4FDD7_MAIZE Putative uncharacterized protein OS=Zea m... 89 2e-16 tr|A2X6Z6|A2X6Z6_ORYSI Putative uncharacterized protein OS=Oryza... 88 3e-16 tr|Q6K8R6|Q6K8R6_ORYSJ Os02g0605500 protein OS=Oryza sativa subs... 86 1e-15 tr|A5C627|A5C627_VITVI Putative uncharacterized protein OS=Vitis... 70 6e-11 tr|Q7XX32|Q7XX32_ORYSJ OSJNBa0060B20.8 protein OS=Oryza sativa s... 62 3e-08 tr|A3AR64|A3AR64_ORYSJ Putative uncharacterized protein OS=Oryza... 60 6e-08 tr|Q01B68|Q01B68_OSTTA TNF receptor-associated factor (ISS) OS=O... 49 2e-04 tr|A4RVU4|A4RVU4_OSTLU Predicted protein OS=Ostreococcus lucimar... 41 0.036 tr|Q4SR19|Q4SR19_TETNG Chromosome 11 SCAF14528, whole genome sho... 38 0.40 tr|B4GUS5|B4GUS5_DROPE GL24164 OS=Drosophila persimilis GN=GL241... 38 0.40 tr|Q6DE42|Q6DE42_XENLA Pdzrn3 protein OS=Xenopus laevis GN=pdzrn... 35 2.0 tr|A7TIC4|A7TIC4_VANPO Putative uncharacterized protein OS=Vande... 35 2.0 tr|B0EGI5|B0EGI5_ENTDI Meiosis-specific nuclear structural prote... 35 3.4
>tr|A9TZK8|A9TZK8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_33451 PE=4 SV=1 Length = 326
Score = 118 bits (296), Expect = 2e-25 Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 7/188 (3%) Frame = +3
Query: 3 VEQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPS-------P 161 VEQVH + + LL T+A AC+EKT GD F L + KKE++++LH + + Sbjct: 8 VEQVHYLTQALLVTLAKACVEKTAGDPFSQRAGVLPDIKKEMLEYLHQQSEAYACGSGIS 67
Query: 162 PSDLNATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHNEKWI 341 + PS + + F+ + KKEDK+++ ++L W+ Sbjct: 68 SHGMGQVLPPSKVVDDIFESFIKSKKNLFSRVSSKIIDSIKKEDKVDDFVKELDRTGVWV 127
Query: 342 FGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVLSGLH 521 G+RE AK +K +D +++ C +KF + +EL +H+S C +P C+N GCG S H Sbjct: 128 VGRREARAKALLKRVDRSKTYHCEMKFDTDKELEDHRSTCNLRPYNCKNNGCGAFYSAHH 187
Query: 522 GAEHDAVC 545 A HD C Sbjct: 188 AAAHDTSC 195
>tr|A7PW27|A7PW27_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025450001 PE=4 SV=1 Length = 366
Score = 112 bits (280), Expect = 1e-23 Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 9/189 (4%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPS--------- 158 E VH +A+ LL +A+AC++ T GDLFRSP S + +KE++++L R S Sbjct: 33 EIVHKIAQALLPGLASACVDNTTGDLFRSPASVAVDIRKEMVEYLTQRSESFVAESVILE 92
Query: 159 PPSDLNATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHNEKW 338 D + P D +D F ++++EDKI++ Q+++ N W Sbjct: 93 DGPDTEVSDHPFDIISDFVDDFASSKRNLFSRVSGWLL-SERREDKIDDFVQEMEINSFW 151
Query: 339 IFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVLSGL 518 + +R IA+ +K D + C + FSS EEL EH+S C F+ + C N+GC Sbjct: 152 LLDRRAAIAQTLLKNADFKNTFHCNMNFSSAEELDEHRSNCSFRSMNCMNEGCNSSFCAA 211
Query: 519 HGAEHDAVC 545 H +HD+VC Sbjct: 212 HMEKHDSVC 220
>tr|Q9SF04|Q9SF04_ARATH F26K24.24 protein (Putative uncharacterized protein At3g11950) (Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEC18) OS=Arabidopsis thaliana GN=At3g11950 PE=2 SV=1 Length = 572
Score = 110 bits (276), Expect = 4e-23 Identities = 59/187 (31%), Positives = 97/187 (51%), Gaps = 9/187 (4%) Frame = +3
Query: 12 VHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPS---------PP 164 VH +A+ L +ATAC++ T GD+FRSP S + +KE+I++L R + Sbjct: 31 VHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKEMIEYLTRRSETFVAEHIVLQGG 90
Query: 165 SDLNATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHNEKWIF 344 S++ A+H P D +D F ++++ED I++ Q+++ + W+ Sbjct: 91 SEIEASHDPFDIISDFIDDFA-TSKRNLFSRVSGWMLSERREDNIDDFAQEMEISGFWLT 149
Query: 345 GQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVLSGLHG 524 RE IA+ +K +D S+ C +KF + ELAEH C ++ + CEN+GC V Sbjct: 150 DHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNCGYRTMNCENEGCTAVFCANQM 209
Query: 525 AEHDAVC 545 HD+VC Sbjct: 210 ENHDSVC 216
>tr|A9REQ2|A9REQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174203 PE=4 SV=1 Length = 373
Score = 106 bits (264), Expect = 9e-22 Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 14/195 (7%) Frame = +3
Query: 3 VEQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPS---PPSDL 173 VE+V ++ LL +A AC+EKT G L + V+ L KKE++++L+ + + S L Sbjct: 17 VEEVKRLSHALLVALAAACVEKTSGTLSQR-VAVLPGVKKEMLEYLNQQSQTYANSSSSL 75
Query: 174 NATHS-----------PSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDL 320 ++S P+ K +L+ F+ A K E KI++ +L Sbjct: 76 QRSNSLQHVFVSQVTYPTHIVKDMLETFIKSKRNMFSRVSGIVIDAHKGE-KIDDFVHEL 134
Query: 321 QHNEKWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCG 500 + W+ G+RE +AK +K +D ++ C ++F +EL +HK+ C +PITC N+GCG Sbjct: 135 DQTDMWLAGRREVLAKALLKRIDQKKTYHCGMRFEIEDELDKHKTSCVLRPITCPNEGCG 194
Query: 501 HVLSGLHGAEHDAVC 545 V S LH HDA C Sbjct: 195 DVFSALHVDAHDASC 209
>tr|Q6RZU6|Q6RZU6_MUSAC Putative uncharacterized protein H9-8 OS=Musa acuminata GN=H9-8 PE=4 SV=1 Length = 1382
Score = 98.6 bits (244), Expect = 2e-19 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 11/191 (5%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSD----- 170 E V +A+ LL +ATAC++ T G LF+S S +KE++D+L R ++ Sbjct: 26 ELVRKIAQLLLPGLATACVDNTTG-LFKSAASVAVVTRKEMVDYLKQRSQMYVTEAVGQG 84
Query: 171 ---LNATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXX---ADKKEDKIEELEQDLQHNE 332 +N SD ++ FV ++ +EDKI++ Q+++ N Sbjct: 85 DDIVNMVEEFSDEPTEIISGFVDDFASSKRNLFSRVSGWLSSESREDKIDDFVQEMETNV 144
Query: 333 KWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVLS 512 W +RE IA+ I+ +D R+ C+ KF S ++LAEH++ C F+ + C N+GC S Sbjct: 145 FWSIDRREAIAEILIRNVDLKRAFHCSKKFDSAQQLAEHETQCSFRILGCTNEGCKAKFS 204
Query: 513 GLHGAEHDAVC 545 +H +HD+ C Sbjct: 205 AIHAEKHDSEC 215
>tr|Q7XX31|Q7XX31_ORYSJ Os04g0218900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0060B20.16 PE=2 SV=1 Length = 334
Score = 96.3 bits (238), Expect = 9e-19 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 12/192 (6%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSDL---- 173 E +H +A++LL +A CI+ T GDLFR P + +KE++D++ R + SD Sbjct: 26 EAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIES 85
Query: 174 --------NATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHN 329 P + +D F +D +EDKI++ Q+++ Sbjct: 86 EASQDQENEMPEDPFEIVSIFMDDF-SSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMT 144
Query: 330 EKWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVL 509 W +RE IA+ +K +D C K+ + E LA+HK+ C F+P+TC N GC + Sbjct: 145 RFWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPNDGCRAKV 204
Query: 510 SGLHGAEHDAVC 545 S +HD+ C Sbjct: 205 SVRCMQDHDSAC 216
>tr|A3B2E7|A3B2E7_ORYSJ cDNA, clone: J065161N15, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_017219 PE=2 SV=1 Length = 334
Score = 96.3 bits (238), Expect = 9e-19 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 12/192 (6%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSDL---- 173 E +H +A++LL +A CI+ T GDLFR P + +KE++D++ R + SD Sbjct: 26 EAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIES 85
Query: 174 --------NATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHN 329 P + +D F +D +EDKI++ Q+++ Sbjct: 86 EASQDQENEMPEDPFEIVSIFMDDF-SSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMT 144
Query: 330 EKWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVL 509 W +RE IA+ +K +D C K+ + E LA+HK+ C F+P+TC N GC + Sbjct: 145 RFWPLERREIIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPNDGCRAKV 204
Query: 510 SGLHGAEHDAVC 545 S +HD+ C Sbjct: 205 SVRCMQDHDSAC 216
>tr|A2Y2Z9|A2Y2Z9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19388 PE=4 SV=1 Length = 334
Score = 96.3 bits (238), Expect = 9e-19 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 12/192 (6%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSDL---- 173 E +H +A++LL +A CI+ T GDLFR P + +KE++D++ R + SD Sbjct: 26 EAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIES 85
Query: 174 --------NATHSPSDRAKALLDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHN 329 P + +D F +D +EDKI++ Q+++ Sbjct: 86 EASQDQENEMPEDPFEIVSIFMDDF-SSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMT 144
Query: 330 EKWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVL 509 W +RE IA+ +K +D C K+ + E LA+HK+ C F+P+TC N GC + Sbjct: 145 RFWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPNDGCRAKV 204
Query: 510 SGLHGAEHDAVC 545 S +HD+ C Sbjct: 205 SVRCMQDHDSAC 216
>tr|A3AR63|A3AR63_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_013285 PE=4 SV=1 Length = 334
Score = 95.5 bits (236), Expect = 2e-18 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 11/191 (5%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSD--LNA 179 E +H +A++LL +A CI+ T GDLFR P + +KE++D++ R + SD + + Sbjct: 26 EAMHKLAQFLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIES 85
Query: 180 THSPSDRAKALLDQF---------VHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHNE 332 S + +D F +D +EDKI++ Q+++ Sbjct: 86 EASQDQENEMPVDPFEIVSIFMDDFSSTKRNIIGHVSGWLMSDSREDKIDDFVQEMEMTR 145
Query: 333 KWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVLS 512 W +RE IA+ +K +D C K+ + E LA+HK+ C F+P+TC N GC +S Sbjct: 146 FWPLERREVIAEVLLKNVDLKTKYHCPEKYENEERLADHKAQCSFRPVTCPNDGCRAKVS 205
Query: 513 GLHGAEHDAVC 545 +HD+ C Sbjct: 206 VRCMQDHDSAC 216
>tr|A2ZIP5|A2ZIP5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37696 PE=4 SV=1 Length = 335
Score = 94.4 bits (233), Expect = 4e-18 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 12/192 (6%) Frame = +3
Query: 6 EQVHAVARYLLRTVATACIEKTYGDLFRSPVSALDEAKKELIDFLHTRPPSPPSD-LNAT 182 E +H +A+ LL +A CI+ T GDLFR P + +KE++D++ R + SD L + Sbjct: 26 EAMHKLAQLLLPGLAAVCIDCTTGDLFRKPSVVAVDMRKEMVDYVTQRSETFISDSLIES 85
Query: 183 HSPSDRAKAL-----------LDQFVHXXXXXXXXXXXXXXXADKKEDKIEELEQDLQHN 329 + D K + +D F +D +EDKI++ Q+++ Sbjct: 86 EASQDEEKEMPEDPFEVVSIFMDDF-SSTKRNIIGHVSGWLMSDNREDKIDDFVQEMEMT 144
Query: 330 EKWIFGQRERIAKDFIKALDSTRSSICALKFSSHEELAEHKSICPFKPITCENQGCGHVL 509 W +RE IA+ +K +D C K+ + + LA+H++ C F+P+TC N GC + Sbjct: 145 RFWPLERREAIAEVLLKNVDLKTKYHCPEKYENEQRLADHRAQCSFRPVTCPNDGCRAKV 204
Query: 510 SGLHGAEHDAVC 545 S +HD+ C Sbjct: 205 SVRCMTDHDSAC 216
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