DK953909 |
Clone id |
TST39A01NGRL0019_A13 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_A13. 5' end sequence. |
Accession |
DK953909 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AGATGGGCGGCGGAATTTAGAACCTGTTCTAGTCACCCTCTACGTGACGCTGGAAATGTA CCCATGGTATAAAACGGCAGTACTCATGCATAACGGAATTGTGCTGTAGCAGACGAGGGG CACATGCGATCCTTGCTACTGCCCTTCCTTCTCTCTCTGCTGCTCTGGGTTGCCTACTTT GGCTCCATCACCGCCACAATCCTTGCCAAAAGCGACCTCGAGAAGTGCACCCGTGCCAAG CTCAAAGATGACATCCAATGTGGAAACAAAATTGTCGTGGAGCTCTCCATTGCAGCAGGA AAACATGCAGATGAAGATGCCATAATGGCGACTTTGGATGCTGTTAAAAATTCTACCAGC GGGGAAGTTCAGATATTGAAGGATCCACAAACAATCAAAATTTCAAAAAGTGCAGTATTC ATGGGCTATCCTATCAAGTTTGAGCAGTTATAATGATCGGGGTGAGCGGATTTATCCTGA GCAAACGGGATTTTGCTGTGAATGTACGGGTTTGACAAGATCAGACCATCGTGGCATGCA TCCAAATTTGCAACTTGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q12L71 |
Definition |
sp|Q12L71|SSTT_SHEDO Serine/threonine transporter sstT OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) |
Align length |
126 |
Score (bit) |
32.3 |
E-value |
1.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5ADU5 |
Definition |
tr|A5ADU5|A5ADU5_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
81 |
Score (bit) |
60.5 |
E-value |
6.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953909|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_A13, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5ADU5|A5ADU5_VITVI Putative uncharacterized protein OS=Vitis... 60 6e-08 tr|A7QKI5|A7QKI5_VITVI Chromosome chr2 scaffold_112, whole genom... 59 1e-07 tr|Q2PGG7|Q2PGG7_LILLO Generative cell specific-1 OS=Lilium long... 58 4e-07 tr|Q1AP31|Q1AP31_ARATH HAP2 (Generative cell specific-1) OS=Arab... 57 9e-07 tr|Q4DKJ2|Q4DKJ2_TRYCR Putative uncharacterized protein OS=Trypa... 48 5e-05 tr|Q5W6B9|Q5W6B9_ORYSJ Os05g0269500 protein OS=Oryza sativa subs... 49 1e-04 tr|A3B212|A3B212_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2Y2K5|A2Y2K5_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|Q2PGG5|Q2PGG5_PHYPO Generative cell specific-1 OS=Physarum po... 42 2e-04 tr|A6MD07|A6MD07_9ORYZ Histidine rich-like protein OS=Oryza brac... 46 0.002 tr|A4GRC6|A4GRC6_CHLRE Membrane fusion protein minus (Fragment) ... 39 0.006 tr|A8J3B3|A8J3B3_CHLRE Gamete-specific protein (Fragment) OS=Chl... 39 0.006 tr|Q2PGG4|Q2PGG4_CHLRE Generative cell specific-1 (Fragment) OS=... 39 0.006 tr|Q9T0D9|Q9T0D9_ARATH Putative uncharacterized protein AT4g1172... 41 0.039 tr|Q4PCH2|Q4PCH2_USTMA Putative uncharacterized protein OS=Ustil... 39 0.19 tr|A8E667|A8E667_USTMA B-ZIP transcription factor OS=Ustilago ma... 39 0.19 tr|A4S9L4|A4S9L4_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 0.95 tr|Q4FX68|Q4FX68_LEIMA Putative uncharacterized protein OS=Leish... 30 1.3 tr|A4IAU5|A4IAU5_LEIIN Putative uncharacterized protein OS=Leish... 30 1.7 tr|A4HM88|A4HM88_LEIBR Proteophosphoglycan ppg3, putative OS=Lei... 34 4.7 tr|Q9Y894|Q9Y894_9AGAR CBHII OS=Volvariella volvacea GN=cbhII PE... 34 4.7 tr|B6GWR4|B6GWR4_PENCH Pc12g07210 protein OS=Penicillium chrysog... 34 4.7 tr|Q46SA1|Q46SA1_RALEJ Putative periplasmic protein OS=Ralstonia... 34 6.2 tr|A8X7D4|A8X7D4_CAEBR Putative uncharacterized protein OS=Caeno... 34 6.2 tr|A4HM81|A4HM81_LEIBR Putative uncharacterized protein OS=Leish... 34 6.2 tr|Q84QA0|Q84QA0_ORYSJ Os03g0262300 protein OS=Oryza sativa subs... 33 8.1 tr|Q10NR0|Q10NR0_ORYSJ cDNA, clone: J100061K16, full insert sequ... 33 8.1 tr|B8AKC3|B8AKC3_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.1 tr|A3AGA1|A3AGA1_ORYSJ Putative uncharacterized protein OS=Oryza... 33 8.1 tr|B6K9M4|B6K9M4_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.1
>tr|A5ADU5|A5ADU5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001267 PE=4 SV=1 Length = 933
Score = 60.5 bits (145), Expect = 6e-08 Identities = 27/81 (33%), Positives = 52/81 (64%) Frame = +1
Query: 199 ILAKSDLEKCTRAKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDAVKNSTSGEVQIL 378 IL+KS LEKC + D++ C KI++++++ +G E +I+A + V+ +++ ++Q L Sbjct: 516 ILSKSKLEKCEKVSESDNLNCTKKIILDMAVPSGSSGGEASIVAEVVEVEENSTHKMQTL 575
Query: 379 KDPQTIKISKSAVFMGYPIKF 441 + P TI ++KSA + Y I + Sbjct: 576 RVPPTITVNKSAAYAVYEITY 596
>tr|A7QKI5|A7QKI5_VITVI Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001129001 PE=4 SV=1 Length = 752
Score = 59.3 bits (142), Expect = 1e-07 Identities = 26/81 (32%), Positives = 52/81 (64%) Frame = +1
Query: 199 ILAKSDLEKCTRAKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDAVKNSTSGEVQIL 378 IL+KS LEKC + D++ C KI++++++ +G E +I+A + V+ +++ ++Q L Sbjct: 34 ILSKSKLEKCEKVSESDNLNCTKKIILDMAVPSGSSGGEASIVAEVVEVEENSTHKMQTL 93
Query: 379 KDPQTIKISKSAVFMGYPIKF 441 + P TI ++KS+ + Y I + Sbjct: 94 RVPPTITVNKSSAYAVYEITY 114
>tr|Q2PGG7|Q2PGG7_LILLO Generative cell specific-1 OS=Lilium longiflorum GN=GCS1 PE=2 SV=1 Length = 698
Score = 57.8 bits (138), Expect = 4e-07 Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%) Frame = +1
Query: 184 SITATILAKSDLEKCTRAKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDAV--KNST 357 S IL+KS +E+CT+ D + C NKIVV+L++ +G E +I+A L V + + Sbjct: 22 STAVEILSKSRVERCTKTSDSDKLDCNNKIVVDLAVPSGSSGGEASIVAQLVEVEQRENA 81
Query: 358 SGEVQILKDPQTIKISKSAVFMGYPI 435 + ++ L++P I I+KSA + Y + Sbjct: 82 TRKMHTLREPPVITINKSAAYALYKL 107
>tr|Q1AP31|Q1AP31_ARATH HAP2 (Generative cell specific-1) OS=Arabidopsis thaliana GN=GCS1 PE=2 SV=1 Length = 705
Score = 56.6 bits (135), Expect = 9e-07 Identities = 26/81 (32%), Positives = 49/81 (60%) Frame = +1
Query: 199 ILAKSDLEKCTRAKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDAVKNSTSGEVQIL 378 IL+KS LEKC + ++ C KIV+ L++ +G E +I+A + V++++S +Q + Sbjct: 27 ILSKSKLEKCEKTSDSGNLNCSTKIVLNLAVPSGSSGGEASIVAEIVEVEDNSSSNMQTV 86
Query: 379 KDPQTIKISKSAVFMGYPIKF 441 + P I ++KSA + Y + + Sbjct: 87 RIPPVITVNKSAAYALYDLTY 107
>tr|Q4DKJ2|Q4DKJ2_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053509105.4 PE=4 SV=1 Length = 588
Score = 47.8 bits (112), Expect(2) = 5e-05 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +1
Query: 199 ILAKSDLEKCTRAKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDAV-KNSTSGEVQI 375 +LA S +E+C R + + C K+VV LS+ + + D + + DAV K +GE + Sbjct: 30 LLASSSIEQCDRVGTDNSLPCEKKLVVTLSVDSDQAEDVEEFVILRDAVDKTKGTGEEHV 89
Query: 376 LKDPQTIKISKSAVFMGYPIKFEQ 447 P + SKS V YP+ +E+ Sbjct: 90 EFQPIRLTTSKSRVQYSYPLFYER 113
Score = 22.7 bits (47), Expect(2) = 5e-05 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2
Query: 455 DRGERIYPEQTGFCCEC 505 D R P GFCC C Sbjct: 146 DTAGRPIPYSQGFCCRC 162
>tr|Q5W6B9|Q5W6B9_ORYSJ Os05g0269500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0037H03.12 PE=2 SV=1 Length = 722
Score = 49.3 bits (116), Expect = 1e-04 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Frame = +1
Query: 169 VAYFGSITAT-ILAKSDLEKCTR-AKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDA 342 +A+ G T IL+KS LE C+ + ++C K+VV+L++ +G E +++A + Sbjct: 16 LAFVGGACGTEILSKSRLESCSHDSDAGGRLKCDRKLVVDLAVPSGASGGEASLVARVAG 75
Query: 343 VK--NSTSGEVQILKDPQTIKISKSAVFMGYPIKF 441 V+ N T + ++DP I +SKSA + Y + + Sbjct: 76 VEEENDTPSATKSIRDPPVITVSKSATYALYALTY 110
>tr|A3B212|A3B212_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017084 PE=4 SV=1 Length = 651
Score = 49.3 bits (116), Expect = 1e-04 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Frame = +1
Query: 169 VAYFGSITAT-ILAKSDLEKCTR-AKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDA 342 +A+ G T IL+KS LE C+ + ++C K+VV+L++ +G E +++A + Sbjct: 16 LAFVGGACGTEILSKSRLESCSHDSDAGGRLKCDRKLVVDLAVPSGASGGEASLVARVAG 75
Query: 343 VK--NSTSGEVQILKDPQTIKISKSAVFMGYPIKF 441 V+ N T + ++DP I +SKSA + Y + + Sbjct: 76 VEEENDTPSATKSIRDPPVITVSKSATYALYALTY 110
>tr|A2Y2K5|A2Y2K5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19236 PE=4 SV=1 Length = 143
Score = 49.3 bits (116), Expect = 1e-04 Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 4/95 (4%) Frame = +1
Query: 169 VAYFGSITAT-ILAKSDLEKCTR-AKLKDDIQCGNKIVVELSIAAGKHADEDAIMATLDA 342 +A+ G T IL+KS LE C+ + ++C K+VV+L++ +G E +++A + Sbjct: 16 LAFVGGACGTEILSKSRLESCSHDSDAGGRLKCDRKLVVDLAVPSGASGGEASLVARVAG 75
Query: 343 VK--NSTSGEVQILKDPQTIKISKSAVFMGYPIKF 441 V+ N T + ++DP I +SKSA + Y + + Sbjct: 76 VEEENDTPSATKSIRDPPVITVSKSATYALYALTY 110
>tr|Q2PGG5|Q2PGG5_PHYPO Generative cell specific-1 OS=Physarum polycephalum GN=GCS1 PE=2 SV=1 Length = 808
Score = 42.0 bits (97), Expect(2) = 2e-04 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%) Frame = +1
Query: 178 FGSITATILAKSDLEKCTRAKLKDD--IQCGNKIVVELSIAAGKHADEDAIMATLDAVKN 351 F ++ A ++A S + C +D + C K VV LS+ G++ E A + + Sbjct: 15 FSTLHADLIASSQITNCVLDGSSEDTILNCQKKFVVSLSVDNGQNKTE----AVQFTISS 70
Query: 352 STSGEVQI-LKDPQTIKISKSAVFMGYPIKFEQ 447 +T G + +P TI +SKS V + YPI + Q Sbjct: 71 ATDGNTTLQFVNPWTITLSKSPVAIYYPISYLQ 103
Score = 26.2 bits (56), Expect(2) = 2e-04 Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 11/39 (28%) Frame = +2
Query: 422 WAILSSLSS-----------YNDRGERIYPEQTGFCCEC 505 W ++SS S Y D P+ GFCC C Sbjct: 119 WIVVSSCQSGAYSDNPTCGWYKDSNGNNIPDSQGFCCSC 157
>tr|A6MD07|A6MD07_9ORYZ Histidine rich-like protein OS=Oryza brachyantha PE=4 SV=1 Length = 634
Score = 45.8 bits (107), Expect = 0.002 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%) Frame = +1
Query: 193 ATILAKSDLEKCTRAKLKDD----IQCGNKIVVELSIAAGKHADEDAIMATL-DAVKNST 357 A +LAKS LE C R DD + C +K+V+++++ + E +++A + D +N T Sbjct: 37 ADVLAKSRLESCVRD--TDDGGRRLTCDSKLVLDVAVPSDSSGGEASLVAKVADVEENDT 94
Query: 358 SGEVQILKDPQTIKISKSAVFMGYPIKF 441 ++DP I I+KS VF Y + + Sbjct: 95 EATPMRIRDPPVITINKSEVFALYALTY 122
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