DK953902
Clone id TST39A01NGRL0019_A06
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_A06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GGTAATATTCAATCTTAATTTAGCAACCATACCTGCATACTGGCCGTCGTTTTACAACGT
CGATTCCTCCTCTATGGTCATCAGTCATCATCGGTCGGATGTTGATATGTCTGTGTCCCA
TGAGCTGTTGTGGATAACTATCCTCTCTTTCCCTCTAGTCCTCTCCAACTAGTAGTCACC
AAAGGATGTACAAATAAGGTGACTTGGGGATAATTGTGTAAATTATCCTAGTAAATAAAG
CATCGACACTATATTTTGTAGGAAGTTTTTATCACAAAACTTGCACACAATACGTAGTTT
CTTGATGCTTTGTAGCACAAAATGATCTTTGTAGTCAAGGTCATGGTGATGTTTTACATA
ATGTTTGTACATGCTCATGTCTACGTGGCAAAATATTGTAACGGTTCATGCACCCCTTTA
ATCTTTACTAAAGATTTTATAG
■■Homology search results ■■ -
sp_hit_id Q60266
Definition sp|Q60266|Y3501_METJA Uncharacterized protein MJECL01 OS=Methanocaldococcus jannaschii
Align length 63
Score (bit) 34.3
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953902|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_A06, 5'
(380 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60266|Y3501_METJA Uncharacterized protein MJECL01 OS=Methano... 34 0.20
sp|A4SHP7|PYRI_AERS4 Aspartate carbamoyltransferase regulatory c... 32 0.97
sp|A0KQG1|PYRI_AERHH Aspartate carbamoyltransferase regulatory c... 32 0.97
sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus lae... 29 8.2
sp|Q04691|FBP1_DROME Fat-body protein 1 OS=Drosophila melanogast... 29 8.2

>sp|Q60266|Y3501_METJA Uncharacterized protein MJECL01
OS=Methanocaldococcus jannaschii GN=MJECL01 PE=4 SV=1
Length = 249

Score = 34.3 bits (77), Expect = 0.20
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = -2

Query: 322 VDMSMYKHYVKHHHDLDYKDHFVLQSIKKLRIVCKFCDKNFLQNIVSML---YLLG*FTQ 152
+D SM +++V + +D+D + + +K+L ++CK K++ +NI L +L F +
Sbjct: 76 LDNSMKEYHVFYIYDVDKLSDLIAEELKRLYLICKSEGKSYYENIFFRLDRKSILKLFMK 135

Query: 151 LSP 143
+SP
Sbjct: 136 ISP 138


>sp|A4SHP7|PYRI_AERS4 Aspartate carbamoyltransferase regulatory
chain OS=Aeromonas salmonicida (strain A449) GN=pyrI
PE=3 SV=1
Length = 154

Score = 32.0 bits (71), Expect = 0.97
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -2

Query: 295 VKHHHDLDYKDHFVLQSIKKL-RIVCKFCDKNFLQNIVSMLY 173
+ H+ +D +F ++ +K + R+ CK+C+K+F Q+IVS Y
Sbjct: 115 ISHNEPVD--SYFRVREVKGVVRMKCKYCEKSFTQDIVSERY 154


>sp|A0KQG1|PYRI_AERHH Aspartate carbamoyltransferase regulatory
chain OS=Aeromonas hydrophila subsp. hydrophila (strain
ATCC 7966 / NCIB 9240) GN=pyrI PE=3 SV=1
Length = 154

Score = 32.0 bits (71), Expect = 0.97
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = -2

Query: 295 VKHHHDLDYKDHFVLQSIKKL-RIVCKFCDKNFLQNIVSMLY 173
+ H+ +D +F ++ +K + R+ CK+C+K+F Q+IVS Y
Sbjct: 115 ISHNEPVD--SYFRVREVKGVVRMKCKYCEKSFTQDIVSERY 154


>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis
GN=zic2-B PE=2 SV=1
Length = 497

Score = 28.9 bits (63), Expect = 8.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2

Query: 325 HVDMSMYKHYVKHHHDLDYKDHFVLQSIKKLRIVCKFCDKNFLQN 191
++ M+M H+ HHH ++ Q K ++CK+ D L N
Sbjct: 241 NMGMNMAAHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLNN 285


>sp|Q04691|FBP1_DROME Fat-body protein 1 OS=Drosophila melanogaster
GN=Fbp1 PE=2 SV=2
Length = 1029

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = -2

Query: 208 KNFLQNIVSMLYLLG*FTQLSPSHLICTSFGDY*LERTRGKERIVIHNSSWDTDI 44
+NF+QN++ L LL TQL S LI D E+ G++R+ +++ + D+
Sbjct: 264 QNFVQNLIQELALLEDVTQLEQSQLI---NNDQREEQWVGRQRVQYQDNNQERDL 315


tr_hit_id A8ABH9
Definition tr|A8ABH9|A8ABH9_IGNH4 Putative uncharacterized protein OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
Align length 53
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953902|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_A06, 5'
(380 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8ABH9|A8ABH9_IGNH4 Putative uncharacterized protein OS=Ignic... 35 2.4
tr|Q8ID16|Q8ID16_PLAF7 Putative uncharacterized protein MAL13P1.... 34 4.1
tr|A0YJ58|A0YJ58_9CYAN Putative uncharacterized protein OS=Lyngb... 33 9.1

>tr|A8ABH9|A8ABH9_IGNH4 Putative uncharacterized protein
OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 /
JCM 14125) GN=Igni_1104 PE=4 SV=1
Length = 109

Score = 34.7 bits (78), Expect = 2.4
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -2

Query: 307 YKHYVKHHHDLDYKDHFVLQSIKKLRIVCKFCDKNF--LQNIVSMLYLLG*FT 155
+ H+ HHHD++ ++L++++ L+ K C++N LQN V LY FT
Sbjct: 31 HHHHHHHHHDINEVLVYILETLEDLKERVKRCEQNVDSLQNDVRTLYKTAVFT 83


>tr|Q8ID16|Q8ID16_PLAF7 Putative uncharacterized protein MAL13P1.351
OS=Plasmodium falciparum (isolate 3D7) GN=MAL13P1.351
PE=4 SV=1
Length = 2825

Score = 33.9 bits (76), Expect = 4.1
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -2

Query: 328 CHVDMSMYKHYVKHHHDLDYKDHFVLQSIKKLRIVCKFCDKNFLQNIVS--MLYLLG*FT 155
C++D+S YK+++K++ D ++ ++F+ IKK KN + I + +YL+ +
Sbjct: 1386 CNIDISFYKNFLKNNKDKEFDENFI-NEIKKFETRKDHILKNIYEYITNERNMYLINQYI 1444

Query: 154 QLS 146
LS
Sbjct: 1445 NLS 1447


>tr|A0YJ58|A0YJ58_9CYAN Putative uncharacterized protein OS=Lyngbya
sp. PCC 8106 GN=L8106_02052 PE=4 SV=1
Length = 331

Score = 32.7 bits (73), Expect = 9.1
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -2

Query: 307 YKHYVKHHHDLDYKDHFVLQSIKKLRIVCKFCDKNFLQNIVSMLYLLG*FTQLSPSHLIC 128
YKHY+K H DLD+ F + ++ R KF KN + + +L + + HL+C
Sbjct: 199 YKHYLKQHFDLDFNQLFTITNLPIGR--TKFYLKNHNIHQPYLQFLEENYNSKTTEHLMC 256