DK953724
Clone id TST39A01NGRL0018_I16
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_I16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTCTACGTATATTACGTGCTTTACTCTCTGTTGAGTTTCTCACCACAGAGAACCTCGTAC
GTTTCCGAGCCAATTTTATTGTGGCCCATTGTTCAGCTGAGCAGAGATGGGTGCTTGCTC
CAGTAAGCCCAAAACAACCGAATTCGAAGGTTCCATGGAACCTCGAAAGCCCACTGATGC
GGCTGCTGATCGACCTCAAGAAACAGAACGGGGCCTGGAGAACCTTGCTGATGTCCATAG
CAAAGAAGCGCCTGCAAAAGTGGGTGAAGGGGGAGAGGCCGCACATGCAAACACAGAAGC
TGCACAAGCAACACCAGAGCCTGATTCCGGCATAGATGAGGGACTGCTGAAGGTCGTGGT
ATCAAGATCAGCAGAGGTTAGTTCTGATGTTCTTAGAGAGAAAGAAGCAGTTCAGAAGGA
AGCCAGTGATGAGTTTGAGCAGAAAGAGAGTAAGGTTGATGGTGTTTCTGATGAGGTTGT
GCAGAAACATGATTTGGATGTTGGAGGTGTCGCAGATAGTGCAAGTGTGAGCGTTAATGG
TATGGATGACAAGGAAGCGGGTTTG
■■Homology search results ■■ -
sp_hit_id Q58EX2
Definition sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens
Align length 43
Score (bit) 33.5
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953724|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_I16, 5'
(565 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens GN=SDK2 ... 33 0.74
sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2 ... 33 0.97
sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2... 32 2.8
sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sap... 31 3.7
sp|P39074|BMRU_BACSU Protein bmrU OS=Bacillus subtilis GN=bmrU P... 31 3.7
sp|Q60542|ZEB1_MESAU Zinc finger E-box-binding homeobox 1 OS=Mes... 31 4.9
sp|P10745|RET3_HUMAN Retinol-binding protein 3 OS=Homo sapiens G... 31 4.9
sp|Q9CWM4|PFD1_MOUSE Prefoldin subunit 1 OS=Mus musculus GN=Pfdn... 31 4.9
sp|Q873L8|YME2_NEUCR Mitochondrial escape protein 2 OS=Neurospor... 30 6.3
sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum maj... 30 6.3
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha OS=Gallus ... 30 6.4

>sp|Q58EX2|SDK2_HUMAN Protein sidekick-2 OS=Homo sapiens GN=SDK2
PE=1 SV=2
Length = 2170

Score = 33.5 bits (75), Expect = 0.74
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3

Query: 153 PWNLESPLMRLLIDLKKQNGAWRTLLMSIAKKRLQKWVKGERP 281
P++ SPL+R ++++ + N W LL S+ K VKG P
Sbjct: 613 PFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVP 655


>sp|Q6V4S5|SDK2_MOUSE Protein sidekick-2 OS=Mus musculus GN=Sdk2
PE=2 SV=1
Length = 2176

Score = 33.1 bits (74), Expect = 0.97
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3

Query: 153 PWNLESPLMRLLIDLKKQNGAWRTLLMSIAKKRLQKWVKGERP 281
P++ SPLMR ++++ + N W LL S+ + VKG P
Sbjct: 619 PFDGNSPLMRYVLEMSENNAPWTILLASVDPEATSVMVKGLVP 661


>sp|Q8AV57|SDK2_CHICK Protein sidekick-2 OS=Gallus gallus GN=SDK2
PE=2 SV=2
Length = 2177

Score = 31.6 bits (70), Expect = 2.8
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3

Query: 111 VLAPVSPKQPNSK--VPWNLESPLMRLLIDLKKQNGAWRTLLMSIAKKRLQKWVKGERP 281
VL+P+ + N P++ SPL+R L+++ + N W LL S+ + V+G P
Sbjct: 604 VLSPLEKRAINLTWAKPFDGNSPLLRYLVEISENNAPWTVLLASVDPELTWVVVRGLVP 662


>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens
GN=EP300 PE=1 SV=2
Length = 2414

Score = 31.2 bits (69), Expect = 3.7
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Frame = +2

Query: 128 PKTTEFEGSMEPRKPTDAAADRPQETERGLEN-LADVHSKEAPAKVXXXXXXXXXXXXXX 304
P TT+ ++P P +AD+PQ+ R ++ A V + AP
Sbjct: 888 PPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAP------------LLPPQ 935

Query: 305 XXTP--EPDSGIDEGLLKVVVSRSAEVSSDVLREK---EAVQKEASDEFEQKE 448
TP +P I+ + + S EV+S + EK + V+ EA E +Q E
Sbjct: 936 PATPLSQPAVSIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPE 988


>sp|P39074|BMRU_BACSU Protein bmrU OS=Bacillus subtilis GN=bmrU PE=4
SV=1
Length = 297

Score = 31.2 bits (69), Expect = 3.7
Identities = 17/55 (30%), Positives = 33/55 (60%)
Frame = +2

Query: 314 PEPDSGIDEGLLKVVVSRSAEVSSDVLREKEAVQKEASDEFEQKESKVDGVSDEV 478
P PD+ I++GLL V++ R+ +++ LRE ++++ + D F + S V E+
Sbjct: 208 PLPDASIEDGLLDVLICRNTNLTA--LRELMSMEQGSIDRFTGELSYVQASRIEI 260


>sp|Q60542|ZEB1_MESAU Zinc finger E-box-binding homeobox 1
OS=Mesocricetus auratus GN=ZEB1 PE=2 SV=1
Length = 1043

Score = 30.8 bits (68), Expect = 4.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2

Query: 386 DVLREKEAVQKEASDEFEQKESKVDGVSDEVVQKHD 493
++ EKE +A +E E++E ++DG DE K D
Sbjct: 975 ELQEEKECGNAQAEEEEEEEEEEMDGAKDEAAAKTD 1010


>sp|P10745|RET3_HUMAN Retinol-binding protein 3 OS=Homo sapiens
GN=RBP3 PE=1 SV=2
Length = 1247

Score = 30.8 bits (68), Expect = 4.9
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1

Query: 325 IRLWCCLCSFCVCMCGLSPFTHFCRRFFAMDISKVLQAPFCF 200
+R W L S V +CGL+ TH + +D++KVL +CF
Sbjct: 2 MREWVLLMS--VLLCGLAGPTHLFQPSLVLDMAKVLLDNYCF 41


>sp|Q9CWM4|PFD1_MOUSE Prefoldin subunit 1 OS=Mus musculus GN=Pfdn1
PE=2 SV=1
Length = 122

Score = 30.8 bits (68), Expect = 4.9
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +2

Query: 323 DSGIDEGLLKVVVSRSAEVSSDVLREKEAVQKEASDEFEQKESKVD 460
++ + EG+ ++ + +S EV + L EK+ + KE E EQK+S ++
Sbjct: 57 ETNMYEGVGRMFILQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLE 102


>sp|Q873L8|YME2_NEUCR Mitochondrial escape protein 2 OS=Neurospora
crassa GN=yme-2 PE=3 SV=1
Length = 895

Score = 30.4 bits (67), Expect = 6.3
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 30/108 (27%)
Frame = +3

Query: 93 SAEQRWVLAPVSPKQPNSKVPWN---------------LESPLMRLLIDLKKQNG----- 212
+ EQ W L P+S +P+N LE+ LI +K QNG
Sbjct: 740 TTEQAWYLISHLAASPSSSIPYNSVLLSNTFASSPETALEALANAELITVKSQNGMPSEI 799

Query: 213 -----AWRTLLMSIA-----KKRLQKWVKGERPHMQTQKLHKQHQSLI 326
++ +A K R+ V E M+TQK+ K Q L+
Sbjct: 800 KAGKPVYQAAFQKLASDEKVKARMDLLVLTELAKMETQKIEKVEQELV 847


>sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum majus
GN=MYB340 PE=2 SV=1
Length = 198

Score = 30.4 bits (67), Expect = 6.3
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +3

Query: 147 KVPWNLESPLMRLLIDLKKQNGAWRTLLMSIAKKRLQK-----WVKGERPHMQTQKLHKQ 311
K PW +E L+ + G W T+ S KR K W+ RP ++ + +
Sbjct: 15 KGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPE 74

Query: 312 HQSLI 326
Q LI
Sbjct: 75 EQLLI 79


tr_hit_id B4FKR1
Definition tr|B4FKR1|B4FKR1_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 129
Score (bit) 38.9
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953724|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_I16, 5'
(565 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4FKR1|B4FKR1_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.20
tr|A8UEP2|A8UEP2_9FLAO Translation initiation factor IF-2 OS=Fla... 34 4.9
tr|A6NMR8|A6NMR8_HUMAN Putative uncharacterized protein SDK2 OS=... 33 8.2
tr|A5DKP4|A5DKP4_PICGU Putative uncharacterized protein OS=Pichi... 33 8.3

>tr|B4FKR1|B4FKR1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 133

Score = 38.9 bits (89), Expect = 0.20
Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Frame = +2

Query: 107 MGACSSKPKTTEFEGSMEPRKPTDAAADRPQETERGLENLAD------VHSKEAPAKVXX 268
MGAC++KPKT E + E T A P+ T +E AD V +E A
Sbjct: 1 MGACATKPKTLEGQAPAEAAVSTPKVA--PEATPISVEVAADEQVAEKVVVEEPAAAADV 58

Query: 269 XXXXXXXXXXXXXXTPEPDSGIDEGLLKVVVSRSAEVSSDVLREKEAVQKEASDEFEQKE 448
EPD +E + K VV ++ EK A E + E K+
Sbjct: 59 EHQKANEVVAPEAAVAEPDHKEEEAVEKTVVEEEKPAAAANAEEKVATAAETTTTVEAKK 118

Query: 449 SKVDGVSDE 475
V+ E
Sbjct: 119 KDVEEARKE 127


>tr|A8UEP2|A8UEP2_9FLAO Translation initiation factor IF-2
OS=Flavobacteriales bacterium ALC-1 GN=FBALC1_15232 PE=3
SV=1
Length = 918

Score = 34.3 bits (77), Expect = 4.9
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +2

Query: 365 RSAEVSSDVLREKEAVQKEASDEFEQKESKVDGVSDEVVQK 487
++ EVS L+EKEA++++ E E+K+ + D V +E V K
Sbjct: 60 KAQEVSEAKLKEKEALREKREREIEEKQKQEDAVKEEPVVK 100


>tr|A6NMR8|A6NMR8_HUMAN Putative uncharacterized protein SDK2
OS=Homo sapiens GN=SDK2 PE=4 SV=2
Length = 1851

Score = 33.5 bits (75), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3

Query: 153 PWNLESPLMRLLIDLKKQNGAWRTLLMSIAKKRLQKWVKGERP 281
P++ SPL+R ++++ + N W LL S+ K VKG P
Sbjct: 294 PFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVP 336


>tr|A5DKP4|A5DKP4_PICGU Putative uncharacterized protein OS=Pichia
guilliermondii GN=PGUG_03845 PE=4 SV=2
Length = 518

Score = 33.5 bits (75), Expect = 8.3
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 9/126 (7%)
Frame = +2

Query: 122 SKPKTTEFEGSMEPRKP------TDAAADRPQETERGLENLADVHSKEAPAKVXXXXXXX 283
+K + E E EP K TD A + L DV +APA
Sbjct: 375 TKAEVAEPEPKEEPEKAGVEADVTDIAEAGASDNGVAPPTLNDVVGTDAPAPETGDVGTA 434

Query: 284 XXXXXXXXXTPEPDSGIDEGLL---KVVVSRSAEVSSDVLREKEAVQKEASDEFEQKESK 454
D G E + KV+ + +A ++DV R EA + E +E E+KE +
Sbjct: 435 SETEKAGTAPETEDVGTAETEVPHTKVIDTTTANSAADVERVSEAAEPEKEEENEEKEEE 494

Query: 455 VDGVSD 472
+G D
Sbjct: 495 KEGTPD 500