DK953636
Clone id TST39A01NGRL0018_E20
Library
Length 327
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_E20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
AAAGCTTGTTACTGTGGAGCCCAAGATTGCCAAGGAAGGCTGTATTAACATCAGTATGTT
TCTGCACTAAGCCCTTGGATAATGCACGGCTTTTCAGGCTTTAACTGTTTGTGGCTTTAC
AATAACAGCTTCCATTTTTGTGGAAAATTGGTTCAGTGCATTCAAATTATGTAAAACGGA
AAGCCCAACTCCTTGCTTGCCAGTTTGGCATGGTTGTTTTAAGGGTAGCACCTAGATTGA
CAAACATGGCATTGCCTGTAATTGTAAAAAATATGTTTTGAATACATGTAACTTTTATAG
GCAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id O82175
Definition sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana
Align length 15
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953636|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E20, 5'
(302 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lys... 30 2.9
sp|Q5RD78|HECD2_PONAB Probable E3 ubiquitin-protein ligase HECTD... 30 2.9
sp|Q5U5R9|HECD2_HUMAN Probable E3 ubiquitin-protein ligase HECTD... 30 2.9

>sp|O82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3
lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5
PE=2 SV=1
Length = 794

Score = 30.4 bits (67), Expect = 2.9
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1

Query: 1 KACYCGAQDCQGRLY 45
K CYCG+ +C GRLY
Sbjct: 780 KFCYCGSAECSGRLY 794


>sp|Q5RD78|HECD2_PONAB Probable E3 ubiquitin-protein ligase HECTD2
OS=Pongo abelii GN=HECTD2 PE=2 SV=1
Length = 776

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2

Query: 161 FKLCKTESPTPCLPVWHGCF 220
FK+ K E+ T CLPV H CF
Sbjct: 726 FKISKNETSTNCLPVAHTCF 745


>sp|Q5U5R9|HECD2_HUMAN Probable E3 ubiquitin-protein ligase HECTD2
OS=Homo sapiens GN=HECTD2 PE=2 SV=2
Length = 776

Score = 30.4 bits (67), Expect = 2.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2

Query: 161 FKLCKTESPTPCLPVWHGCF 220
FK+ K E+ T CLPV H CF
Sbjct: 726 FKISKNETSTNCLPVAHTCF 745


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953636|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E20, 5'
(302 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******