DK953503
Clone id TST39A01NGRL0017_P02
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_P02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
CACTTCTCTGCGGTGGCCGATTCCTGCGCAGGCCTCTTTTCTAAGGATTCGGTTTGAGCA
CTCTGCCGGCCAACATGGAAAGAGGCTCCTTTTCAGCTGGCTAGAGGCGCTAGAAGGAGC
TCATTCGTGCCATTCTCTGCAAGAACTAGAGCTCCCGCCATGCTCGCTTCAATCTCAGCC
AGCGCACCTTTTCTGAAGGGGTCTGCTTTACTCGGTTTCAAAATGGCTTACTTCCATGCA
TCTTCCATTTGGTGTGAGAAACGAGCAGACAAATTTAGATGTGCTTCCAATGGTTACAAC
CTGAAGGACTATTTTAAGTATCTGAAGAGAAAGAGAAGAGCAGCTGAAAAATTGGAATGT
TTAAGATGGGTGTCATGTGAAATTTATGTCGAGCAGTTATATCGGTGTCGTGGTGTGAAT
ATGCGTAAATTTCAAAAGCGATGGGGCCCTGCTAGATACTCTTCCTACAAGGATTATAGC
GATTTTGATGTACAGTATGGATCCAAGAACCAAAAAAGAGCTGCTCAATACGCCGGCCAA
AGAGATCGTTCTCAGTTCACCTGGCAGGATTCTTACACTGAATG
■■Homology search results ■■ -
sp_hit_id Q9QAW8
Definition sp|Q9QAW8|DPOL_HBVE3 Protein P OS=Hepatitis B virus genotype E (isolate Chimpanzee/Ch195/1999)
Align length 22
Score (bit) 32.3
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953503|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_P02, 5'
(584 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9QAW8|DPOL_HBVE3 Protein P OS=Hepatitis B virus genotype E (... 32 1.8
sp|Q9J5S2|DPOL_HBVOR Protein P OS=Orangutan hepatitis B virus (i... 32 2.3
sp|Q9YPV8|DPOL_HBVGO Protein P OS=Gorilla hepatitis B virus (iso... 32 2.3
sp|Q80IU4|DPOL_HBVE4 Protein P OS=Hepatitis B virus genotype E (... 32 3.0
sp|Q80IU7|DPOL_HBVE2 Protein P OS=Hepatitis B virus genotype E (... 32 3.0
sp|Q9QMI1|DPOL_HBVD4 Protein P OS=Hepatitis B virus genotype D s... 32 3.0
sp|P03156|DPOL_HBVD3 Protein P OS=Hepatitis B virus genotype D s... 32 3.0
sp|P0C690|DPOL_HBVC9 Protein P OS=Hepatitis B virus genotype C s... 32 3.0
sp|Q99102|MUC4_HUMAN Mucin-4 OS=Homo sapiens GN=MUC4 PE=1 SV=2 31 5.2
sp|Q67878|DPOL_HBVD6 Protein P OS=Hepatitis B virus genotype D s... 31 5.2
sp|Q913A7|DPOL_HBVC7 Protein P OS=Hepatitis B virus genotype C s... 31 5.2
sp|Q8EB96|OSTA_SHEON LPS-assembly protein OS=Shewanella oneidens... 30 6.7
sp|P03155|DPOL_HBVD1 Protein P (Fragment) OS=Hepatitis B virus g... 30 6.7

>sp|Q9QAW8|DPOL_HBVE3 Protein P OS=Hepatitis B virus genotype E
(isolate Chimpanzee/Ch195/1999) GN=P PE=3 SV=1
Length = 842

Score = 32.3 bits (72), Expect = 1.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E+H +PSSA SQ KR +F CW
Sbjct: 302 EFHNISPSSAGSQSKRPVFSCW 323


>sp|Q9J5S2|DPOL_HBVOR Protein P OS=Orangutan hepatitis B virus
(isolate Somad) GN=P PE=3 SV=1
Length = 832

Score = 32.0 bits (71), Expect = 2.3
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E H PSSA SQ K S+FPCW
Sbjct: 292 ELHGFPPSSAGSQSKGSVFPCW 313


>sp|Q9YPV8|DPOL_HBVGO Protein P OS=Gorilla hepatitis B virus
(isolate Cameroon/gor97) GN=P PE=3 SV=1
Length = 832

Score = 32.0 bits (71), Expect = 2.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCWPAECSNRI 46
E H+ +PSSA SQ K S+F CW + N I
Sbjct: 292 ELHDISPSSARSQSKGSVFSCWWLQFRNSI 321


>sp|Q80IU4|DPOL_HBVE4 Protein P OS=Hepatitis B virus genotype E
(isolate Cote d'Ivoire/ABI-212/2003) GN=P PE=3 SV=1
Length = 842

Score = 31.6 bits (70), Expect = 3.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E+H PSSA SQ KR +F CW
Sbjct: 302 EFHNIPPSSAGSQSKRPVFSCW 323


>sp|Q80IU7|DPOL_HBVE2 Protein P OS=Hepatitis B virus genotype E
(isolate Cote d'Ivoire/ABI-129/2003) GN=P PE=3 SV=1
Length = 842

Score = 31.6 bits (70), Expect = 3.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E+H PSSA SQ KR +F CW
Sbjct: 302 EFHNIPPSSAGSQSKRPVFSCW 323


>sp|Q9QMI1|DPOL_HBVD4 Protein P OS=Hepatitis B virus genotype D
subtype ayw (isolate Japan/JYW796/1988) GN=P PE=3 SV=1
Length = 832

Score = 31.6 bits (70), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
++H PSSA SQ +R +FPCW
Sbjct: 292 DFHNLPPSSARSQSERPVFPCW 313


>sp|P03156|DPOL_HBVD3 Protein P OS=Hepatitis B virus genotype D
subtype ayw (isolate France/Tiollais/1979) GN=P PE=3
SV=1
Length = 832

Score = 31.6 bits (70), Expect = 3.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E+H P+SA SQ +R +FPCW
Sbjct: 292 EFHNLPPNSARSQSERPVFPCW 313


>sp|P0C690|DPOL_HBVC9 Protein P OS=Hepatitis B virus genotype C
subtype ayw (isolate Australia/AustRC/1992) GN=P PE=3
SV=1
Length = 843

Score = 31.6 bits (70), Expect = 3.0
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCWPAECSNRILRKEAC 28
E+H PSSA SQ K S+F CW + N E C
Sbjct: 303 EFHSIPPSSAGSQSKGSVFSCWWLQFRNSKPCSEYC 338


>sp|Q99102|MUC4_HUMAN Mucin-4 OS=Homo sapiens GN=MUC4 PE=1 SV=2
Length = 2169

Score = 30.8 bits (68), Expect = 5.2
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1

Query: 208 LLGFKMA--YFHASS-----IWCEKRADKFRCASNGYNLKDYFKYLKRKRRAAEKLECLR 366
L+GF YF S +W R D+F +++G +++ L R+ R +LECL+
Sbjct: 1262 LMGFSSGDGYFENSPLMSQPVWERYRPDRFLNSNSGLQGLQFYR-LHREERPNYRLECLQ 1320

Query: 367 WVSCE 381
W+ +
Sbjct: 1321 WLKSQ 1325


>sp|Q67878|DPOL_HBVD6 Protein P OS=Hepatitis B virus genotype D
subtype ayw (isolate Italy/CI/1992) GN=P PE=3 SV=1
Length = 832

Score = 30.8 bits (68), Expect = 5.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3

Query: 135 EWHE*APSSASSQLKRSLFPCW 70
E H P+SA SQ +R +FPCW
Sbjct: 292 ELHNFPPNSARSQSERPIFPCW 313


tr_hit_id A7Q960
Definition tr|A7Q960|A7Q960_VITVI Chromosome chr19 scaffold_66, whole genome shotgun sequence OS=Vitis vinifera
Align length 92
Score (bit) 37.0
E-value 0.81
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953503|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_P02, 5'
(584 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q960|A7Q960_VITVI Chromosome chr19 scaffold_66, whole genom... 37 0.81
tr|A5C9M4|A5C9M4_VITVI Putative uncharacterized protein OS=Vitis... 37 0.81
tr|B2HKC1|B2HKC1_MYCMM Putative uncharacterized protein OS=Mycob... 34 5.2
tr|A0PVD6|A0PVD6_MYCUA Putative uncharacterized protein OS=Mycob... 34 5.2
tr|B4JQB9|B4JQB9_DROGR GH13670 OS=Drosophila grimshawi GN=GH1367... 34 6.9
tr|A7RVL9|A7RVL9_NEMVE Predicted protein OS=Nematostella vectens... 33 9.0

>tr|A7Q960|A7Q960_VITVI Chromosome chr19 scaffold_66, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00033347001
PE=4 SV=1
Length = 332

Score = 37.0 bits (84), Expect = 0.81
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +1

Query: 58 ALCRPTWKEAPFQLARGARRSSFVPFSARTRAPAMLASISASAP----FLKGSALLGFKM 225
A+ W++ P G S+ FSA A A AS++A+ P FL G+A G +
Sbjct: 5 AILLDLWRKNP-SFFSGQTLHSYGSFSATAAASAAAASVAAATPFASRFLFGNA--GISV 61

Query: 226 AYFHASSIWCEKRADKFRCASNGYNLKDYFKY 321
A A + W + K R AS D KY
Sbjct: 62 AQCDAGATWSDDYISKLRSASANIFQNDSLKY 93


>tr|A5C9M4|A5C9M4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_014078 PE=4 SV=1
Length = 332

Score = 37.0 bits (84), Expect = 0.81
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Frame = +1

Query: 58 ALCRPTWKEAPFQLARGARRSSFVPFSARTRAPAMLASISASAP----FLKGSALLGFKM 225
A+ W++ P G S+ FSA A A AS++A+ P FL G+A G +
Sbjct: 5 AILLDLWRKNP-SFFSGQTLHSYGSFSATAAASAAAASVAAATPFASRFLFGNA--GISV 61

Query: 226 AYFHASSIWCEKRADKFRCASNGYNLKDYFKY 321
A A + W + K R AS D KY
Sbjct: 62 AQCDAGATWSDDYISKLRSASANIFQNDSLKY 93


>tr|B2HKC1|B2HKC1_MYCMM Putative uncharacterized protein
OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
GN=MMAR_5213 PE=4 SV=1
Length = 237

Score = 34.3 bits (77), Expect = 5.2
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1

Query: 70 PTWKEAPFQLARGARRSSFVPFSARTRAPAMLASISASAPFLKGSALL 213
P W +A F A RSS V + R+ M ISA+APF G LL
Sbjct: 67 PLWGDASFDSVAPALRSSCVVAAVRSATVGMPIDISATAPFTDGRWLL 114


>tr|A0PVD6|A0PVD6_MYCUA Putative uncharacterized protein
OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_4286
PE=4 SV=1
Length = 237

Score = 34.3 bits (77), Expect = 5.2
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1

Query: 70 PTWKEAPFQLARGARRSSFVPFSARTRAPAMLASISASAPFLKGSALL 213
P W +A F A RSS V + R+ M ISA+APF G LL
Sbjct: 67 PLWGDASFDSVAPALRSSCVVAAVRSATVGMPIDISATAPFTDGRWLL 114


>tr|B4JQB9|B4JQB9_DROGR GH13670 OS=Drosophila grimshawi GN=GH13670
PE=4 SV=1
Length = 518

Score = 33.9 bits (76), Expect = 6.9
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Frame = +1

Query: 304 KDYFKYLKRKRRAAEKLECLRWVS---CEIY--VEQL-------YRCRGVNMRKFQKRWG 447
KDY + R RA + + VS E+Y +EQL Y+C + Q+R
Sbjct: 378 KDYIHRVGRTARAGRSGQAITIVSQYDIELYQRIEQLLGKQLPLYKCEEDEVMALQERVA 437

Query: 448 PARYSS---YKDYSDFDVQYGSKNQKRAAQYAGQRDRSQFT 561
A+ ++ +KD D G + KR A Q D QFT
Sbjct: 438 EAQRTAKLEFKDLEDSKGYKGGRGNKRTAASDNQDDSEQFT 478


>tr|A7RVL9|A7RVL9_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g202799 PE=4 SV=1
Length = 252

Score = 33.5 bits (75), Expect = 9.0
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2

Query: 529 IEQLFFGSWIHTVHQNRYNPCRKSI*QGPIAFEIYAYSHHDTDITARHKFHMTPILNIPI 350
+ L + IHT+H N ++P ++ I++Y HH TA H H P P
Sbjct: 57 LHHLQLSTAIHTIHSNLHHP--------QLSTAIHSYPHHTQPYTAIHTIHSYPHYTQPY 108

Query: 349 FQ 344
Q
Sbjct: 109 TQ 110