DK953481 |
Clone id |
TST39A01NGRL0017_O03 |
Library |
TST39 |
Length |
512 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_O03. 5' end sequence. |
Accession |
DK953481 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CAAATGTTGCATCTTTTAGAAGCAGAGTGCCTTCTAGAACCTTCGCAACATATAAGGATG TCTCTTTTGGTGGCTCAGCCAGAAACAAAATGAAGAGAGGAGTTGATAGAATCGCTGATG CTGTTCAAGTTACTCTTGGACCAAGAGGACGCAATGTTGCCATTGAACAAAGTTGGGGCA GTCCAAAGATTACTAAGGATGGTGTTACTGTCGCCAAGGCCATCGATTTTGAAGATCCAT TAGAAAACATGGGTGCTCAATTAGTTAAAAATGTCGCAAGTAAGACAAACGATGTTGCTG GTGATGGTACAACAACCGCTACCATCTTGTCTCGTGCCATCTTTTCTGAAGGTGCCAAGG CAGTTGAAGCCGGAATGAATCCAATGGATTTGAAGCGTGGTATTGATTTGGCTGTTGAAG AAGTTGTTAGCTTTTTAAAACAAAAGTCAAGAACTATTCAATCTGGTGAACAAATTGAAC AAGTCGCTACTATCTCAGCTAACAATGACCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A6UM48 |
Definition |
sp|A6UM48|CH605_SINMW 60 kDa chaperonin 5 OS=Sinorhizobium medicae (strain WSM419) |
Align length |
153 |
Score (bit) |
211.0 |
E-value |
2.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3SEA9 |
Definition |
tr|Q3SEA9|Q3SEA9_PARTE Hsp60, putative (Chromosome undetermined scaffold_46, whole genome shotgun sequence) OS=Paramecium tetraurelia |
Align length |
169 |
Score (bit) |
209.0 |
E-value |
6.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953481|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_O03, 5' (512 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q3SEA9|Q3SEA9_PARTE Hsp60, putative (Chromosome undetermined ... 209 6e-53 tr|B3PRB6|B3PRB6_RHIE6 60 kDa chaperonin, heat shock protein OS=... 208 1e-52 tr|Q3SEA5|Q3SEA5_PARTE Hsp60, putative OS=Paramecium tetraurelia... 208 1e-52 tr|A0BDW9|A0BDW9_PARTE Chromosome undetermined scaffold_101, who... 208 1e-52 tr|B2SCZ4|B2SCZ4_BRUA1 Chaperonin Cpn60/TCP-1 OS=Brucella abortu... 207 2e-52 tr|A9XHY3|A9XHY3_MASBA Chaperonin 60 OS=Mastigamoeba balamuthi G... 207 3e-52 tr|Q9BLG8|Q9BLG8_PARCA Hsp60 (Fragment) OS=Paramecium caudatum P... 206 4e-52 tr|A9TYY1|A9TYY1_PHYPA Predicted protein OS=Physcomitrella paten... 206 5e-52 tr|A9T1C2|A9T1C2_PHYPA Predicted protein OS=Physcomitrella paten... 206 7e-52 tr|Q0H0L2|Q0H0L2_GLOIN Heat shock protein 60 OS=Glomus intraradi... 206 7e-52 tr|B5ZRD6|B5ZRD6_RHILW Chaperonin GroEL OS=Rhizobium leguminosar... 205 9e-52 tr|B0IXD3|B0IXD3_RHILT 60 kDa chaperonin OS=Rhizobium leguminosa... 205 9e-52 tr|Q0H0L1|Q0H0L1_GLOIN Heat shock protein 60 OS=Glomus intraradi... 205 9e-52 tr|A8TNJ3|A8TNJ3_9PROT 60 kDa chaperonin OS=alpha proteobacteriu... 205 1e-51 tr|A8IMK1|A8IMK1_CHLRE Chaperonin 60C (Fragment) OS=Chlamydomona... 204 3e-51 tr|B0U8W8|B0U8W8_METS4 60 kDa chaperonin OS=Methylobacterium sp.... 203 3e-51 tr|B8IEZ4|B8IEZ4_METNO Chaperonin GroEL OS=Methylobacterium nodu... 203 3e-51 tr|A3WT97|A3WT97_9BRAD 60 kDa chaperonin OS=Nitrobacter sp. Nb-3... 203 3e-51 tr|B7FQ72|B7FQ72_PHATR Mitochondria-targeted chaperonin OS=Phaeo... 203 3e-51 tr|A9S6X6|A9S6X6_PHYPA Predicted protein OS=Physcomitrella paten... 203 3e-51 tr|Q23JZ7|Q23JZ7_TETTH TCP-1/cpn60 chaperonin family protein OS=... 203 3e-51 tr|B0U7N9|B0U7N9_METS4 60 kDa chaperonin OS=Methylobacterium sp.... 203 5e-51 tr|A7IN91|A7IN91_XANP2 60 kDa chaperonin OS=Xanthobacter autotro... 202 8e-51 tr|B6JHW7|B6JHW7_OLICO Chaperonin GroL OS=Oligotropha carboxidov... 202 1e-50 tr|B3QIE7|B3QIE7_RHOPT Chaperonin GroEL OS=Rhodopseudomonas palu... 202 1e-50 tr|A7IEH2|A7IEH2_XANP2 60 kDa chaperonin OS=Xanthobacter autotro... 201 2e-50 tr|B8IR55|B8IR55_METNO Chaperonin GroEL OS=Methylobacterium nodu... 201 2e-50 tr|Q010P5|Q010P5_OSTTA Chaperonin-60, mitochondrial (IC) OS=Ostr... 201 2e-50 tr|B6JIX0|B6JIX0_OLICO Chaperonin GroL OS=Oligotropha carboxidov... 201 2e-50 tr|A3WX61|A3WX61_9BRAD 60 kDa chaperonin OS=Nitrobacter sp. Nb-3... 201 2e-50
>tr|Q3SEA9|Q3SEA9_PARTE Hsp60, putative (Chromosome undetermined scaffold_46, whole genome shotgun sequence) OS=Paramecium tetraurelia GN=GSPATT00015732001 PE=3 SV=1 Length = 571
Score = 209 bits (532), Expect = 6e-53 Identities = 106/169 (62%), Positives = 132/169 (78%) Frame = +3
Query: 3 NVASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGS 182 N+ +S V + F K++SFG R +M RG D++ADAVQ TLGP+GRNV I+Q++G Sbjct: 11 NIVLGKSLVSTPVFFAGKELSFGQECRQQMLRGCDKLADAVQTTLGPKGRNVVIDQAFGG 70
Query: 183 PKITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKA 362 PKITKDGVTVAKAI+F + EN+GAQLVK+VASK ND AGDGTTTAT+L+RAIF EG K+ Sbjct: 71 PKITKDGVTVAKAIEFSNRFENIGAQLVKSVASKANDEAGDGTTTATVLARAIFKEGVKS 130
Query: 363 VEAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 V AG+NPMDL+RGI+LA E VV LK +S+ ++S E IE VATISAN D Sbjct: 131 VAAGLNPMDLRRGINLACEAVVKDLKSRSKQVKSKEMIENVATISANGD 179
>tr|B3PRB6|B3PRB6_RHIE6 60 kDa chaperonin, heat shock protein OS=Rhizobium etli (strain CIAT 652) GN=groELch1 PE=4 SV=1 Length = 545
Score = 208 bits (530), Expect = 1e-52 Identities = 103/153 (67%), Positives = 129/153 (84%) Frame = +3
Query: 54 KDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGSPKITKDGVTVAKAIDFE 233 K++ FG +AR KM RGVD +ADAV+VTLGP+GRNV I++S+G+P+ITKDGV+VAK I+ E Sbjct: 4 KEIKFGRTAREKMLRGVDILADAVKVTLGPKGRNVIIDKSFGAPRITKDGVSVAKEIELE 63
Query: 234 DPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKAVEAGMNPMDLKRGIDLA 413 D ENMGAQ+V+ VASKTND+AGDGTTTAT+L++AI EGAKAV AGMNPMDLKRGIDLA Sbjct: 64 DKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDLA 123
Query: 414 VEEVVSFLKQKSRTIQSGEQIEQVATISANNDR 512 V EVV L+ K++ I + E++ QV TISAN +R Sbjct: 124 VAEVVKDLQAKAKKINTSEEVAQVGTISANGER 156
>tr|Q3SEA5|Q3SEA5_PARTE Hsp60, putative OS=Paramecium tetraurelia GN=IBLD0021 PE=3 SV=1 Length = 571
Score = 208 bits (529), Expect = 1e-52 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +3
Query: 3 NVASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGS 182 NV +S V + F K++SFG R +M RG D++ADAVQ TLGP+GRNV I+Q +G Sbjct: 11 NVVLGKSLVSTPVFFAGKELSFGQECRQQMLRGCDKLADAVQTTLGPKGRNVVIDQPYGG 70
Query: 183 PKITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKA 362 PKITKDGVTVAKAI+F + EN+GAQLVK+VASK ND AGDGTTTAT+L+RAIF EG K+ Sbjct: 71 PKITKDGVTVAKAIEFSNRFENIGAQLVKSVASKANDEAGDGTTTATVLARAIFKEGVKS 130
Query: 363 VEAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 V AG+NPMDL+RGI+LA E VV LK +S+ ++S + IE VATISAN D Sbjct: 131 VAAGLNPMDLRRGINLACEAVVKDLKSRSKPVKSKDMIENVATISANGD 179
>tr|A0BDW9|A0BDW9_PARTE Chromosome undetermined scaffold_101, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00027766001 PE=3 SV=1 Length = 561
Score = 208 bits (529), Expect = 1e-52 Identities = 106/169 (62%), Positives = 131/169 (77%) Frame = +3
Query: 3 NVASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGS 182 NV +S V + F K++SFG R +M RG D++ADAVQ TLGP+GRNV I+Q +G Sbjct: 11 NVVLGKSLVSTPVFFAGKELSFGQECRQQMLRGCDKLADAVQTTLGPKGRNVVIDQPYGG 70
Query: 183 PKITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKA 362 PKITKDGVTVAKAI+F + EN+GAQLVK+VASK ND AGDGTTTAT+L+RAIF EG K+ Sbjct: 71 PKITKDGVTVAKAIEFSNRFENIGAQLVKSVASKANDEAGDGTTTATVLARAIFKEGVKS 130
Query: 363 VEAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 V AG+NPMDL+RGI+LA E VV LK +S+ ++S + IE VATISAN D Sbjct: 131 VAAGLNPMDLRRGINLACEAVVKDLKSRSKPVKSKDMIENVATISANGD 179
>tr|B2SCZ4|B2SCZ4_BRUA1 Chaperonin Cpn60/TCP-1 OS=Brucella abortus (strain S19) GN=BAbS19_II01790 PE=4 SV=1 Length = 546
Score = 207 bits (528), Expect = 2e-52 Identities = 103/152 (67%), Positives = 127/152 (83%) Frame = +3
Query: 54 KDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGSPKITKDGVTVAKAIDFE 233 KDV FG +AR KM RGVD +ADAV+VTLGP+GRNV IE+S+G+P+ITKDGV+VAK ++ E Sbjct: 4 KDVKFGRTAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEVELE 63
Query: 234 DPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKAVEAGMNPMDLKRGIDLA 413 D ENMGAQ+++ VASKTND AGDGTTTAT+L +AI EGAKAV AGMNPMDLKRGIDLA Sbjct: 64 DKFENMGAQMLREVASKTNDTAGDGTTTATVLGQAIVQEGAKAVAAGMNPMDLKRGIDLA 123
Query: 414 VEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 V EVV+ L +K++ I + E++ QV TISAN + Sbjct: 124 VNEVVAELLKKAKKINTSEEVAQVGTISANGE 155
>tr|A9XHY3|A9XHY3_MASBA Chaperonin 60 OS=Mastigamoeba balamuthi GN=Cpn60 PE=2 SV=1 Length = 566
Score = 207 bits (526), Expect = 3e-52 Identities = 103/170 (60%), Positives = 136/170 (80%) Frame = +3
Query: 3 NVASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGS 182 +V+ RS+ + ++ KD+ +G AR + +GVDR+AD V TLGP+GRNVA+EQS+G+ Sbjct: 8 HVSRPRSQARCASTSSGKDIRWGSKARAAVLKGVDRLADTVSATLGPKGRNVALEQSYGA 67
Query: 183 PKITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKA 362 PKITKDGVTVAKAI+F DPL ++GAQLVK VASKTND AGDGTTTAT+L+RAI SEG KA Sbjct: 68 PKITKDGVTVAKAIEFRDPLMSLGAQLVKGVASKTNDEAGDGTTTATVLARAILSEGCKA 127
Query: 363 VEAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANNDR 512 V AGMNP D++RGI+ A E VV+ L++ S+ I S +++ QVAT+SAN+D+ Sbjct: 128 VAAGMNPTDVRRGIETAAERVVAELRRMSKQISSQDEVRQVATVSANDDK 177
>tr|Q9BLG8|Q9BLG8_PARCA Hsp60 (Fragment) OS=Paramecium caudatum PE=2 SV=1 Length = 565
Score = 206 bits (525), Expect = 4e-52 Identities = 102/170 (60%), Positives = 134/170 (78%) Frame = +3
Query: 3 NVASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGS 182 N+ ++ + + F K++SFG R +M RG D++ADAVQ TLGP+GRNV I+Q++G Sbjct: 5 NILQGKTLITTPAFFAGKELSFGQECRQQMLRGCDKLADAVQTTLGPKGRNVVIDQAFGG 64
Query: 183 PKITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKA 362 PKITKDGVTVAKAI+F + EN+GAQLVK+VASK ND AGDGTTTAT+L+RAIF EG K+ Sbjct: 65 PKITKDGVTVAKAIEFSNRFENIGAQLVKSVASKANDEAGDGTTTATVLARAIFKEGVKS 124
Query: 363 VEAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANNDR 512 V AGMNPMDL+RGI+LAVE V+ LK +S+ +++ + I+ VATISAN D+ Sbjct: 125 VAAGMNPMDLRRGINLAVEAVLKDLKARSKPVKTKDMIQHVATISANGDQ 174
>tr|A9TYY1|A9TYY1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226792 PE=3 SV=1 Length = 578
Score = 206 bits (524), Expect = 5e-52 Identities = 104/164 (63%), Positives = 133/164 (81%) Frame = +3
Query: 21 SRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGSPKITKD 200 S++ S + KD+ FG AR M +GV+++ADAVQVT+GP+GR V IEQS+GSPK+TKD Sbjct: 23 SKLQSTRHFSAKDIRFGVEARALMLQGVEQLADAVQVTMGPKGRTVIIEQSFGSPKVTKD 82
Query: 201 GVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKAVEAGMN 380 GVTVAKAI+F+D L+N+GA LVK+VAS TNDVAGDGTT AT+L+RAIF EG K+V AGMN Sbjct: 83 GVTVAKAIEFKDRLQNVGASLVKSVASSTNDVAGDGTTCATVLTRAIFVEGCKSVAAGMN 142
Query: 381 PMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANNDR 512 MDL+RGI +AV+ VVS+LK +++ I + E+I QV TISAN DR Sbjct: 143 AMDLRRGISVAVDAVVSYLKSQAKMISTSEEIAQVGTISANGDR 186
>tr|A9T1C2|A9T1C2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233067 PE=3 SV=1 Length = 580
Score = 206 bits (523), Expect = 7e-52 Identities = 106/168 (63%), Positives = 134/168 (79%) Frame = +3
Query: 6 VASFRSRVPSRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGSP 185 V +F +R F+ KD+ FG AR M +GV+++ADAVQVT+GP+GR V IEQS+GSP Sbjct: 19 VQNFNKLQSTRNFSA-KDIRFGVEARALMLQGVEQLADAVQVTMGPKGRTVVIEQSFGSP 77
Query: 186 KITKDGVTVAKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKAV 365 K+TKDGVTVAKAI+F+D L+N+GA LVK+VAS TNDVAGDGTT AT+L+RAIF EG K+V Sbjct: 78 KVTKDGVTVAKAIEFKDRLQNVGASLVKSVASSTNDVAGDGTTCATVLTRAIFVEGCKSV 137
Query: 366 EAGMNPMDLKRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 AGMN MDL+RGI+LAV+ VVS LK +++ I + E+I QV TISAN D Sbjct: 138 AAGMNAMDLRRGINLAVDSVVSHLKSQAKMISTSEEIAQVGTISANGD 185
>tr|Q0H0L2|Q0H0L2_GLOIN Heat shock protein 60 OS=Glomus intraradices GN=hsp60 PE=2 SV=1 Length = 590
Score = 206 bits (523), Expect = 7e-52 Identities = 102/159 (64%), Positives = 129/159 (81%) Frame = +3
Query: 33 SRTFATYKDVSFGGSARNKMKRGVDRIADAVQVTLGPRGRNVAIEQSWGSPKITKDGVTV 212 SR +AT+KD+ FG R + +GVD +A AV VTLGP+GRNV IEQ +GSPKITKDGVTV Sbjct: 33 SRFYATHKDLKFGVEGRASLLKGVDILAKAVAVTLGPKGRNVLIEQPYGSPKITKDGVTV 92
Query: 213 AKAIDFEDPLENMGAQLVKNVASKTNDVAGDGTTTATILSRAIFSEGAKAVEAGMNPMDL 392 AK+I +D EN+GA+LV++VA+KTN++AGDGTTTATIL+RAIF EG K V AG NPMDL Sbjct: 93 AKSISLKDKFENLGARLVQDVANKTNEMAGDGTTTATILTRAIFVEGVKNVAAGCNPMDL 152
Query: 393 KRGIDLAVEEVVSFLKQKSRTIQSGEQIEQVATISANND 509 +RG+ +AV+ +V FL++KSR I + E+I QVATISAN D Sbjct: 153 RRGVQMAVDSIVKFLREKSRVITTSEEIAQVATISANGD 191
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