DK953467 |
Clone id |
TST39A01NGRL0017_N13 |
Library |
TST39 |
Length |
578 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_N13. 5' end sequence. |
Accession |
DK953467 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCAAAGCACCATCTCTGCATGTGTCCAGCGATGTTCCTTTTGATGTAATCCCTCCTCCTC GGCGGTAGGTCTGCCTCATGCAGCTTAGGAATGCGAGCTTCTTCTGCGCAAGTACATCGC TGAGCTGAACAAAACTGTGGAATGGAAACCCTGGCGTGCGTAAAGGTTTGGGCGAGCGGC AGCTTCCTCATGTCCTCGCAGAACAGATCCTCCCCCTCTCTACAGAAAGCACAGCGATCC CTTGTTCGCCGCATCTTCCATACACGGGTTGGTTGCAAGTATCAGCACACGCGTCAATTG AAACACATCATGTGCAGCAGTGAGCTGCACTCTGATGGTGCTGGCCATTCTGATGAAGAT GATTACGTCAACTCTACAGTTCTCGAAGCCGTGGAGGTGAAGAGTGGATCGGAGGGATTT CTGATAAGGATGCAGGATGGGCGATATATCAAATGTGTACATAATAACCCGGATGGGGGA CGTCTACCAGACTATGCACCTCAGCCTGCCATAGTGTTGAAGATGGAAGATGGAAGTGAT CTTCTTCTTCCCATTATTGTATTGGAGCTGCCTGCCGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P79745 |
Definition |
sp|P79745|POU23_DANRE POU domain protein ZP-23 OS=Danio rerio |
Align length |
80 |
Score (bit) |
33.1 |
E-value |
1.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NUL3 |
Definition |
tr|A9NUL3|A9NUL3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
95 |
Score (bit) |
140.0 |
E-value |
7.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953467|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0017_N13, 5' (578 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NUL3|A9NUL3_PICSI Putative uncharacterized protein OS=Picea... 140 7e-32 tr|A7NT78|A7NT78_VITVI Chromosome chr18 scaffold_1, whole genome... 138 3e-31 tr|Q9FWS6|Q9FWS6_ARATH F1B16.9 protein (Wound-responsive protein... 130 4e-29 tr|Q9FWS0|Q9FWS0_ARATH F14P1.1 protein OS=Arabidopsis thaliana G... 130 4e-29 tr|Q93VH2|Q93VH2_ARATH Putative uncharacterized protein At1g1966... 130 4e-29 tr|B7FJ72|B7FJ72_MEDTR Putative uncharacterized protein OS=Medic... 130 7e-29 tr|A5AZ38|A5AZ38_VITVI Putative uncharacterized protein OS=Vitis... 129 1e-28 tr|Q8LA58|Q8LA58_ARATH Wound-responsive protein, putative OS=Ara... 125 2e-27 tr|Q9LW93|Q9LW93_TOBAC Nicotiana tabacum wound inducive mRNA , c... 120 5e-26 tr|Q3S4H7|Q3S4H7_MAIZE Putative wound responsive protein OS=Zea ... 117 4e-25 tr|B6SUR2|B6SUR2_MAIZE Wound responsive protein OS=Zea mays PE=2... 117 4e-25 tr|Q6YZM6|Q6YZM6_ORYSJ Os08g0357000 protein OS=Oryza sativa subs... 114 5e-24 tr|B6TCQ8|B6TCQ8_MAIZE Wound responsive protein OS=Zea mays PE=2... 113 7e-24 tr|A9SUW4|A9SUW4_PHYPA Predicted protein OS=Physcomitrella paten... 113 7e-24 tr|A3BSC4|A3BSC4_ORYSJ Putative uncharacterized protein OS=Oryza... 113 9e-24 tr|A2YUD2|A2YUD2_ORYSI Putative uncharacterized protein OS=Oryza... 113 9e-24 tr|A9TA66|A9TA66_PHYPA Predicted protein (Fragment) OS=Physcomit... 111 3e-23 tr|A9SCC6|A9SCC6_PHYPA Predicted protein OS=Physcomitrella paten... 107 6e-22 tr|A2ZWY9|A2ZWY9_ORYSJ Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A9SPM3|A9SPM3_PHYPA Predicted protein (Fragment) OS=Physcomit... 103 5e-21 tr|A9RQ75|A9RQ75_PHYPA Predicted protein OS=Physcomitrella paten... 103 5e-21 tr|Q5N8J3|Q5N8J3_ORYSJ cDNA clone:J013022J10, full insert sequen... 100 6e-20 tr|Q09LL3|Q09LL3_9ORYZ DNA-binding protein DSP1 OS=Oryza minuta ... 100 6e-20 tr|B8A8D2|B8A8D2_ORYSI Putative uncharacterized protein OS=Oryza... 100 6e-20 tr|A9RXB4|A9RXB4_PHYPA Predicted protein (Fragment) OS=Physcomit... 94 4e-18 tr|B8A1Y4|B8A1Y4_MAIZE Putative uncharacterized protein OS=Zea m... 90 8e-17 tr|A9SJ90|A9SJ90_PHYPA Predicted protein OS=Physcomitrella paten... 74 8e-12 tr|Q6YZM5|Q6YZM5_ORYSJ Putative wound inductive gene OS=Oryza sa... 73 1e-11 tr|A9RZY8|A9RZY8_PHYPA Predicted protein OS=Physcomitrella paten... 50 1e-04 tr|A9TSD4|A9TSD4_PHYPA Predicted protein OS=Physcomitrella paten... 37 0.60
>tr|A9NUL3|A9NUL3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 330
Score = 140 bits (352), Expect = 7e-32 Identities = 65/95 (68%), Positives = 82/95 (86%), Gaps = 5/95 (5%) Frame = +1
Query: 307 IMCSSELHSDGAGHSD-----EDDYVNSTVLEAVEVKSGSEGFLIRMQDGRYIKCVHNNP 471 + CSS + S+ +D ++DYVNS+V+EAVEVKSG+EGFLI+M+DGR+++CVHNNP Sbjct: 66 VQCSSSMSSNNGSMADSFSENDEDYVNSSVIEAVEVKSGAEGFLIKMRDGRHVRCVHNNP 125
Query: 472 DGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 +GG LPDYAPQPAIVLKMEDGSDLLLPIIVLE+P+ Sbjct: 126 EGGHLPDYAPQPAIVLKMEDGSDLLLPIIVLEMPS 160
>tr|A7NT78|A7NT78_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014565001 PE=4 SV=1 Length = 308
Score = 138 bits (347), Expect = 3e-31 Identities = 64/103 (62%), Positives = 84/103 (81%), Gaps = 6/103 (5%) Frame = +1
Query: 286 HTRQLKHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRY 447 HTR+ K + CS SDG G + +++DYVNS+V+EAVEVKSG++GF+I+M+DGR+ Sbjct: 60 HTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIKMRDGRH 119
Query: 448 IKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 ++CVHNNP GG +PDYAP PAIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 120 LRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPIIVLEMPS 162
>tr|Q9FWS6|Q9FWS6_ARATH F1B16.9 protein (Wound-responsive protein, putative) (At1g75380/F1B16_15) OS=Arabidopsis thaliana GN=At1g75380 PE=2 SV=1 Length = 325
Score = 130 bits (328), Expect = 4e-29 Identities = 61/98 (62%), Positives = 79/98 (80%), Gaps = 6/98 (6%) Frame = +1
Query: 301 KHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRYIKCVH 462 K I C HSDG G + ++++YVNS+V+EAVEVKSG++GF+++M+DGR ++CVH Sbjct: 60 KSIKCVFSSHSDGNGSTAENFNENDEEYVNSSVVEAVEVKSGADGFMVKMRDGRQLRCVH 119
Query: 463 NNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 NNP GG LPDYAP PAIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 120 NNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPS 157
>tr|Q9FWS0|Q9FWS0_ARATH F14P1.1 protein OS=Arabidopsis thaliana GN=F14P1.1 PE=4 SV=1 Length = 329
Score = 130 bits (328), Expect = 4e-29 Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 6/103 (5%) Frame = +1
Query: 286 HTRQLKHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRY 447 H R+ K I C HSDG G + +++DYV S+VLEAVEVKSG +GF+++M+DGR Sbjct: 59 HLRRYKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118
Query: 448 IKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 ++CVHNNP GG LP+YAP AIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPS 161
>tr|Q93VH2|Q93VH2_ARATH Putative uncharacterized protein At1g19660 OS=Arabidopsis thaliana GN=At1g19660 PE=2 SV=1 Length = 329
Score = 130 bits (328), Expect = 4e-29 Identities = 62/103 (60%), Positives = 79/103 (76%), Gaps = 6/103 (5%) Frame = +1
Query: 286 HTRQLKHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRY 447 H R+ K I C HSDG G + +++DYV S+VLEAVEVKSG +GF+++M+DGR Sbjct: 59 HLRRYKSIKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118
Query: 448 IKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 ++CVHNNP GG LP+YAP AIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 119 LRCVHNNPQGGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPS 161
>tr|B7FJ72|B7FJ72_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 325
Score = 130 bits (326), Expect = 7e-29 Identities = 72/155 (46%), Positives = 103/155 (66%), Gaps = 10/155 (6%) Frame = +1
Query: 142 METLACVKVWASGSFLM---SSQNRSSPSLQKAQRSLVRRIFHTRVGCKYQHTRQLKHIM 312 M+ + CVK A S M N ++ S +I + C + + R+ + +M Sbjct: 1 MDKMVCVKGSAMCSVAMPMIGPINAGCSRIELWGFSASNKIKPNSLSC-HVNMRKCRTVM 59
Query: 313 -CSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRYIKCVHNNP 471 CS S+G+G + +++DYVNST+LEAVEVKSG++GF+++M+DGR+++CVHN+P Sbjct: 60 NCSFNSSSNGSGSMAENFNENDEDYVNSTILEAVEVKSGADGFIVKMRDGRHLRCVHNSP 119
Query: 472 DGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 GG LPDYAP PAIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 120 HGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPS 154
>tr|A5AZ38|A5AZ38_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009514 PE=4 SV=1 Length = 964
Score = 129 bits (324), Expect = 1e-28 Identities = 60/97 (61%), Positives = 78/97 (80%), Gaps = 6/97 (6%) Frame = +1
Query: 286 HTRQLKHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRY 447 HTR+ K + CS SDG G + +++DYVNS+V+EAVEVKSG++GF+I+M+DGR+ Sbjct: 60 HTRKCKTLQCSFSSSSDGNGSMAENFNENDEDYVNSSVVEAVEVKSGADGFMIKMRDGRH 119
Query: 448 IKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPII 558 ++CVHNNP GG +PDYAP PAIVLKMEDG+ LLLPII Sbjct: 120 LRCVHNNPQGGHMPDYAPHPAIVLKMEDGTGLLLPII 156
>tr|Q8LA58|Q8LA58_ARATH Wound-responsive protein, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 329
Score = 125 bits (314), Expect = 2e-27 Identities = 60/103 (58%), Positives = 77/103 (74%), Gaps = 6/103 (5%) Frame = +1
Query: 286 HTRQLKHIMCSSELHSDGAG------HSDEDDYVNSTVLEAVEVKSGSEGFLIRMQDGRY 447 H R+ K C HSDG G + +++DYV S+VLEAVEVKSG +GF+++M+DGR Sbjct: 59 HLRRYKSTKCLFSSHSDGTGSTAENFNENDEDYVKSSVLEAVEVKSGPDGFMVKMKDGRQ 118
Query: 448 IKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 ++CVHNNP G LP+YAP AIVLKMEDG+ LLLPIIVLE+P+ Sbjct: 119 LRCVHNNPQVGNLPNYAPHSAIVLKMEDGTGLLLPIIVLEMPS 161
>tr|Q9LW93|Q9LW93_TOBAC Nicotiana tabacum wound inducive mRNA , complete cds OS=Nicotiana tabacum PE=2 SV=1 Length = 317
Score = 120 bits (301), Expect = 5e-26 Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 6/111 (5%) Frame = +1
Query: 262 TRVGCKYQHTRQLKHIMCSSELHSDGAGHSDED------DYVNSTVLEAVEVKSGSEGFL 423 +RV C +R K I CS S+G G E+ DYVNS+V+EAVEV+SG +GF+ Sbjct: 43 SRVAC-LPRSRVSKLIGCSFSSSSNGNGSMAENFSESDADYVNSSVVEAVEVRSGKDGFV 101
Query: 424 IRMQDGRYIKCVHNNPDGGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 I+M+DGR++KCV +NP G +PDYAPQPAIVL+MEDG+ LLLPIIVLE+P+ Sbjct: 102 IKMRDGRHLKCVPSNPQCGHIPDYAPQPAIVLRMEDGTGLLLPIIVLEMPS 152
>tr|Q3S4H7|Q3S4H7_MAIZE Putative wound responsive protein OS=Zea mays PE=2 SV=1 Length = 238
Score = 117 bits (294), Expect = 4e-25 Identities = 59/94 (62%), Positives = 75/94 (79%), Gaps = 6/94 (6%) Frame = +1
Query: 313 CSSELHSDGAGH-----SDED-DYVNSTVLEAVEVKSGSEGFLIRMQDGRYIKCVHNNPD 474 CS SDG G+ SD D DYVNSTVLEAVEV+SGSEG++I+M+DG+ ++CVHNN Sbjct: 61 CSFSSSSDGNGYMAGNFSDSDEDYVNSTVLEAVEVRSGSEGYVIKMRDGKNLRCVHNNSQ 120
Query: 475 GGRLPDYAPQPAIVLKMEDGSDLLLPIIVLELPA 576 G +P+ APQPAIVL++EDGS+ LLPIIVLE+P+ Sbjct: 121 GRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPS 154
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