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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953449
Clone id TST39A01NGRL0017_M19
Library
Length 562
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0017_M19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GGGTTTTTTTCCATCCTTCGGCCTCCCTTTTTCCAAGGCTCCCAGAGCCTTCCTTCAACT
GCAGCCCCAGCCCCCTGAAGTCCCCGAAGGTACTTCCCTCTCTGGCTGTTAGGTTTTAGG
CGGTGGCCGTGACCGAGCGCCTGGCCATCCTTTACATTCTTTGGTTATAATGTACTAATA
AGGAGTGTGAGAGGTTATTTCTCACATAAGCTCCACCCAAAGACTCTGTGTCTTCTCCTT
CCCCCTTCTCTCCTTCCCTCTCTTGCACCACTCACCGCACAGCTTCCCCACAAGTGGTGG
TAGAGCCTAGGAGCTCGTTCGATCCCGGCTACACCCCACGCGTGCAGCCCTCCCTGTCCA
GCAAGGAAGCAAGAGAGCTTTGGAAGCTCTGCAGCAGTTAATCAAAGACTGCATCGAGCA
GTCGAGCGAGGAGAGAGTCGGAAGGCATCTGCAGAATCGGAGCTTGGCAAGCATCACACA
GATTGAGCAGTAGCGAGCAGGCGGAGCAACAGGTGAATCGAAGCTTTGGGAGCCCTGCAG
ATTTGAGCAGGGGAAATGGAAA
■■Homology search results ■■ -
sp_hit_id Q6CSC2
Definition sp|Q6CSC2|IRS4_KLULA Increased rDNA silencing protein 4 OS=Kluyveromyces lactis
Align length 49
Score (bit) 30.4
E-value 6.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953449|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_M19, 5'
         (562 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CSC2|IRS4_KLULA Increased rDNA silencing protein 4 OS=Kluyv...    30   6.3  

>sp|Q6CSC2|IRS4_KLULA Increased rDNA silencing protein 4
           OS=Kluyveromyces lactis GN=IRS4 PE=3 SV=1
          Length = 638

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 382 GSSAAVNQRLHRAVERGESRKASAESELGKHHTD*AVASRRSNR*IEAL 528
           G +A V +  HRA+ R   RK+  E +  K H D    S R  +  E +
Sbjct: 419 GGTAGVGRTKHRAMVRSHKRKSFNEDKPWKSHVDIGYISERERKRYEGI 467
tr_hit_id A6G815
Definition tr|A6G815|A6G815_9DELT Serine/threonine kinase family protein OS=Plesiocystis pacifica SIR-1
Align length 56
Score (bit) 35.0
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953449|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0017_M19, 5'
         (562 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6G815|A6G815_9DELT Serine/threonine kinase family protein OS...    35   2.8  
tr|Q5Z4N8|Q5Z4N8_ORYSJ Putative uncharacterized protein P0417E03...    34   4.8  
tr|Q29N83|Q29N83_DROPS Protein Wnt OS=Drosophila pseudoobscura p...    34   4.8  
tr|B4G844|B4G844_DROPE GL18900 OS=Drosophila persimilis GN=GL189...    34   4.8  
tr|B0Y396|B0Y396_ASPFC RNA polymerase II transcription elongatio...    34   4.8  
tr|Q825N2|Q825N2_STRAW Putative uncharacterized protein OS=Strep...    34   6.3  
tr|B5HJC1|B5HJC1_STRPR Secreted protein OS=Streptomyces pristina...    33   8.1  
tr|Q2IJ56|Q2IJ56_ANADE Putative uncharacterized protein OS=Anaer...    33   8.2  

>tr|A6G815|A6G815_9DELT Serine/threonine kinase family protein
           OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_19249 PE=4 SV=1
          Length = 820

 Score = 35.0 bits (79), Expect = 2.8
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +1

Query: 316 RSIPATPHACSPPCPARKQESFGSSAAVNQRLHRAVERGESRKASAESELGKHHTD 483
           R++  T HAC+    A KQ +      +   L+RAVE GE+   + E +L +   D
Sbjct: 408 RTLARTQHACATDDLAGKQHAAALQRKLKHLLNRAVEEGEAPSEALEEQLAQFEVD 463


>tr|Q5Z4N8|Q5Z4N8_ORYSJ Putative uncharacterized protein P0417E03.10
           (Putative uncharacterized protein) OS=Oryza sativa
           subsp. japonica GN=P0417E03.10 PE=4 SV=1
          Length = 215

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
 Frame = -1

Query: 262 EREGEKGEGEDTESLGGAYVRNNLSHSLLVHYNQRM*RMARRSVTATA*NLTAREGSTFG 83
           E +G+ G GE  E  GG + R            +R  R  RR+VT  A  + A  G T G
Sbjct: 104 ETDGDGGSGEGGECGGGGWRRRGC---------RRRCRWGRRTVTEKAYKV-ATAGDTEG 153

Query: 82  DFRG-----LGLQLKEGSGSLGKREAEGW 11
           D RG      G    +G+G  G  + EGW
Sbjct: 154 DKRGEEGGEAGGGDADGAGGDGGGKGEGW 182


>tr|Q29N83|Q29N83_DROPS Protein Wnt OS=Drosophila pseudoobscura
           pseudoobscura GN=GA18561 PE=3 SV=2
          Length = 395

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
 Frame = +2

Query: 368 SKRALEALQQLIKDCIEQSSEERVGRHLQN-RSLASITQIEQ*R------AGGATGESKL 526
           ++ ALE  QQ  +  +E+   +R  R+L N  SL  ++ +E+        AGG  G  K 
Sbjct: 128 AEAALER-QQRQQFSLEEQQYQRRQRYLNNGSSLTDVSPLERLGRNRKPGAGGKRGRRKF 186

Query: 527 WEPCRFEQGKWK 562
           W+  +F QG+W+
Sbjct: 187 WDNIKFPQGEWE 198


>tr|B4G844|B4G844_DROPE GL18900 OS=Drosophila persimilis GN=GL18900
           PE=4 SV=1
          Length = 402

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
 Frame = +2

Query: 368 SKRALEALQQLIKDCIEQSSEERVGRHLQN-RSLASITQIEQ*R------AGGATGESKL 526
           ++ ALE  QQ  +  +E+   +R  R+L N  SL  ++ +E+        AGG  G  K 
Sbjct: 135 AEAALER-QQRQQFSLEEQQYQRRQRYLNNGSSLTDVSPLERLGRNRKPGAGGKRGRRKF 193

Query: 527 WEPCRFEQGKWK 562
           W+  +F QG+W+
Sbjct: 194 WDNIKFPQGEWE 205


>tr|B0Y396|B0Y396_ASPFC RNA polymerase II transcription elongation
           factor (Ctr9), putative OS=Aspergillus fumigatus (strain
           CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_053410 PE=4
           SV=1
          Length = 1195

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = +2

Query: 314 LVRSRLHPTRAALPVQQGSKRALEALQQLIKDCIEQSSEERVGRHL 451
           L+R+ LHP R   P    +   +E+LQQ +K C E+SS+   GR++
Sbjct: 173 LLRASLHPPRPVRPGSVDTSERVESLQQALK-CFEESSKAFGGRNV 217


>tr|Q825N2|Q825N2_STRAW Putative uncharacterized protein
           OS=Streptomyces avermitilis GN=SAV7425 PE=4 SV=1
          Length = 276

 Score = 33.9 bits (76), Expect = 6.3
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +2

Query: 344 AALPVQQGSKRALEALQQLIKDCIEQSSEERVGRHLQNRSLASITQIEQ*RAGG 505
           AA PV    +RALEA ++L +   E+  +  VG H Q  ++  +   E  RAGG
Sbjct: 125 AARPVHADVRRALEATERLTRQTPEELEQLDVGAHRQEVNVLLLRTSELVRAGG 178


>tr|B5HJC1|B5HJC1_STRPR Secreted protein OS=Streptomyces
           pristinaespiralis ATCC 25486 GN=SSDG_05241 PE=4 SV=1
          Length = 192

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +3

Query: 273 HRTASPQVVVEPRSSFDPGYTPRVQPSLSSKE 368
           H TA    VVEPR +F PG TP  +P    +E
Sbjct: 120 HATARATAVVEPRCTFTPGETPAPEPGEGEEE 151


>tr|Q2IJ56|Q2IJ56_ANADE Putative uncharacterized protein
           OS=Anaeromyxobacter dehalogenans (strain 2CP-C)
           GN=Adeh_1911 PE=4 SV=1
          Length = 612

 Score = 33.5 bits (75), Expect = 8.2
 Identities = 24/68 (35%), Positives = 34/68 (50%)
 Frame = +1

Query: 358 PARKQESFGSSAAVNQRLHRAVERGESRKASAESELGKHHTD*AVASRRSNR*IEALGAL 537
           P+R+Q   G +AAV QR   + E+   R+A  E+EL        V +R S +    L  L
Sbjct: 141 PSRRQSVGGPAAAVPQRAPLSPEQARRRRAQLEAEL--------VRARASEKVQHELDGL 192

Query: 538 QI*AGEME 561
           Q  A E+E
Sbjct: 193 QARAAELE 200